Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone2ag0490 | ATGGCTGTTTTCATATTACTTCTTGTAGTGGTATTGCTGCTCTGTATCTGCTCTGCTCTGTTGAGATGGAATGAAGTGAAGTACAGAAAGTTGAAAGGTTTGCCACCTGGCACAATGGGTTGGCCTCTGTTCGGAGAAACGACTGAGTTTCTCAAACAAGGTCCTAACTTTATGAAAACCCAGAGAGCAAGGTATGGAAGCTTTTTCAAATCCCACATATTGGGCTGTCCGACAGTCGTTTCTATGGATCCAGAGCTGAATAAGTACATTCTAATGAGTGAATCAAAAGGACTTGTACCTGGCTATCCCCAATCTATGCTTGATGTTTTAGGCAAATGCAATATTGCAGCTGTTCATGGCTCCACTCATAAGCATGTGAGAGGTGCTCTGCTTTCTCTTGTTAGCCCTCTCATGATCAAACACCTACTTCTGCCCAAAATTGATGATTTCATGAGAGCCCACTTAAGCCATTGGAATGGCAAAATCATCAACATCCAAGAAAAAACCAAAGAGATGGCTCTGCTATCAGCTCTTAAGCAAATTGCTGGCGTAGAATCTGGCTCATTGTCCGAATCATTTGCGCCTGAATTTTTCAAATTAGTTCTGGGCACACTTTCTCTGCCTATCAACTTTCCTGGTACAAATTATCGTCGTGCATTGGAGGCAAGGAAGAACATACTAAGCATGTTGAGACAACTTGTGGAGGAGAGAAGAGCCTCTAAAGAAGATCACAAAGATATGCTTGGCCACTTGATGAGTGATGATATCAAATATAAGCTCAATGAGGAAGAGATTATTGATCAAGTCATTACGATTTTGTACTCGGGTTACGAGACCGTCTCGACCACCTCCATGATGGCTGTTAAGTACCTCCATGATCATCCTAAAGCTCTTCAAGAACTTAGAAAAGAGCATTTGGAGATCAGAGAAAGAAAAAATACCAATGATCCAATTGATTGGGATGACCTGAAAGCAATGAAGTTTACCAGAGCTGTGATATTTGAGACCTCGAGACTAGCTACAATTGTTAACGGAGTTTTGAGGAAAACAACAAAGGATATGGAACTCAATGGATTTGTGATTCCAGAAGGATGGAGAATTTATGTTTATACGAGGGAGATAAATTACGACCCGATAATGTATTCGGAGCCATTAAGCTTCAATCCATGGAGATGGCTGGATAGAAGCTATGAGTCTCAAAGCCATTTCTTTCTATTTGGAGGAGGGACAAGGCAGTGTCCTGGGAAAGAACTGGGAATTGCTGAGATATCTACTTTCCTACACTATTTTGTTAGTAGATACAGGTGGGAGGAAATTGGGGGAGAAAAGCTAATGAAATTTCCAAGGGTTGAAGCACCAAGTGGGTTACACATTAGGGTGTCTGATCTTACTAACTAA | 1398 | 41.34 | MAVFILLLVVVLLLCICSALLRWNEVKYRKLKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRARYGSFFKSHILGCPTVVSMDPELNKYILMSESKGLVPGYPQSMLDVLGKCNIAAVHGSTHKHVRGALLSLVSPLMIKHLLLPKIDDFMRAHLSHWNGKIINIQEKTKEMALLSALKQIAGVESGSLSESFAPEFFKLVLGTLSLPINFPGTNYRRALEARKNILSMLRQLVEERRASKEDHKDMLGHLMSDDIKYKLNEEEIIDQVITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLEIRERKNTNDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFVIPEGWRIYVYTREINYDPIMYSEPLSFNPWRWLDRSYESQSHFFLFGGGTRQCPGKELGIAEISTFLHYFVSRYRWEEIGGEKLMKFPRVEAPSGLHIRVSDLTN | 465 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 2656057 | 2658571 | - | Conep02aG0050300.1 | Cone2ag0490 | 432957 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone2ag0490 | 465 | PRINTS | P450 superfamily signature | 413 | 424 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | P450 superfamily signature | 275 | 292 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | P450 superfamily signature | 404 | 413 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | P450 superfamily signature | 331 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | Pfam | Cytochrome P450 | 35 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | Gene3D | Cytochrome P450 | 25 | 462 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PANTHER | CYTOCHROME P450 26 | 34 | 434 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cone2ag0490 | 465 | FunFam | Cytochrome P450 85A1 | 24 | 462 | - | - | |
| Cone2ag0490 | 465 | SUPERFAMILY | Cytochrome P450 | 28 | 443 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | CDD | CYP90-like | 61 | 461 | - | - | |
| Cone2ag0490 | 465 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 406 | 415 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 330 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 370 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 403 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 413 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0490 | 465 | PRINTS | E-class P450 group I signature | 264 | 281 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone2ag0490 | Cone-Chr2:2656057 | Cone9ag0757 | Cone-Chr9:3623858 | 9.47E-89 | dispersed | |
| Cone16ag0515 | Cone-Chr16:7194953 | Cone2ag0490 | Cone-Chr2:2656057 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone2ag0490 | K09590 | - | vvi:100232983 | 770.385 |