Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0494 ATGATGCACTTGATCCGACTGGAAACATCACTGTCAAATGGGATATCATTACATGGACTCCTGATGGCTACACTAAAGGCAGTTGTGACACTATACAACTACCAACAGTACCGGCACATTCAAGCACCCGGCTGGTCCTTAGGATGGACATGGGCCAAGAAAGAGGTAATATGGAACATGGTAGGAGGACAAGCCACGGAGCAAGGAGATTGTTCTAGATTCAAAGGTAACATACCACATTGCTGCAAGAAGGATCCAACTGTTGTCGATTTGCTTCCTGGAACTCCTTATAATATGCAGATAGCCAATTGCTGCAAAGGTGGGGTTCTCAGCTCGTGGGTCCAAGACCCTGCCAACTCAGTAAGCTCGTTTCAGATCAGTGTCGGTTCAGCAGGGACCAGTAATAAGACGGTTAGGTTGCCTAAGAACTTTACTTTGGATGTGCCCGGGCCTGGTTATACTTGTGGGCCTGCAAAAAAAGTTAGGCTGACTAAATTCCGTAGTGCGGATGGAAGGAGAGTCACTCAAGCTCTGATGACCTGGAATGTTACTTGTACATACTCACAATTTCTGGCTCAGAAAACTCCGACTTGTTGTGTTTCATTGTCCTCTTTTTACAATGACACGATTGTGCCATGTCCGACGTGTTCTTGTGGATGTCAAAGCAATACAGCCTGCATTGAGGAAAAGACGCCACATTTAGCTTCAGTTGTGTCTAGTTTGGGCAAGAACGACTTCTCACCATTGGTCCGATGCACAAAACACATGTGTCCAGTCCGAGTTCATTGGCATGTCAAGATCAATTACAAAGAATACTGGAGAGTGAAGATTACAGTTACGAATTTCAATTACCAGATGAACTATTCGGATTGGAATTTAGTCGTCCAGCATCCCAGCTTTGATAATCTGACACAGATTTTTAGCTTCAACTACAAGTCGATAACTCCTTATGAAGCAATCAATGACACAGGGATGCTCTGGGGGTTGAAGTTTTATAATGATCTGCTTATGCAAGCGGGCCCTATTGGAAATGTACAATCGGAGCTAATTTTCGGGAAAGATAAAGAAAGCTTCACATTTGATAAAGGTTGGGCTTTTCCTCGAAGGGTGTATTTTAATGGCGATAATTGTGTTATGCCGCCTCCAGATGCATACCCATGGTTGCCAAATGCTACTTCCGGCCGATATGCAGTTCCCTTCACTTGTCTAGTTTTGAGTTATTTGATTCTCCTGTTATTCTTTTATGCATAG 1251 43.8 MMHLIRLETSLSNGISLHGLLMATLKAVVTLYNYQQYRHIQAPGWSLGWTWAKKEVIWNMVGGQATEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNMQIANCCKGGVLSSWVQDPANSVSSFQISVGSAGTSNKTVRLPKNFTLDVPGPGYTCGPAKKVRLTKFRSADGRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQSNTACIEEKTPHLASVVSSLGKNDFSPLVRCTKHMCPVRVHWHVKINYKEYWRVKITVTNFNYQMNYSDWNLVVQHPSFDNLTQIFSFNYKSITPYEAINDTGMLWGLKFYNDLLMQAGPIGNVQSELIFGKDKESFTFDKGWAFPRRVYFNGDNCVMPPPDAYPWLPNATSGRYAVPFTCLVLSYLILLLFFYA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2677819 2680352 - Conep02aG0050700.1 Cone2ag0494 432961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0494 416 PANTHER PROTEIN COBRA 25 407 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cone2ag0494 416 PIRSF COBRA 20 416 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone2ag0494 416 Pfam COBRA-like protein 27 188 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1205 Cone-Chr12:9440526 Cone2ag0494 Cone-Chr2:2677819 5.51E-108 dispersed
Cone2ag0494 Cone-Chr2:2677819 Cone3ag0918 Cone-Chr3:4716767 5.58E-155 dispersed
Cone13ag0028 Cone-Chr13:177797 Cone2ag0494 Cone-Chr2:2677819 2.94E-200 wgd
Cone16ag0514 Cone-Chr16:7173152 Cone2ag0494 Cone-Chr2:2677819 2.91E-83 wgd
Cone19ag0037 Cone-Chr19:253809 Cone2ag0494 Cone-Chr2:2677819 5.48E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0494 - - - 0.0