Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0519 ATGGTGGCTTCAGCTTCGTTTCAAAATCTGCTTTCATGGGCAGTGGCAATGTCAATCCTTTTAGTTCAAGCTAAGTGCAGTAGAATTAGTACTACTGCTGCTGCTGGTCAGAGAGTTAGCCATGGCTGGCAAGAAGCTCGTGCAACGTTCTATGGCGACATGAATGGTGGCGAAACTATGCAGGGAGCATGTGGATATGGAGACCTGTTGAAACAAGGGTATGGCCTAGAGACTGCAGCCTTAAGTACTGCCCTCTTCAACAATGGTCTAACATGTGGTGCTTGCTTTGAGATTGTATGCAACAACGATCAGCAGTGGTGCATTCCGAATGCGGCTCCGGTAAGAATCACGGCCACAAATTTCTGCCCTCCGAACTATACCAAAACCCGTGATATTTGGTGCAATCCGCCGCAAAGACACTTTGATTTGTCCATGCCCATGTTCACAAAGCTTGCACACTACAGAGCTGGAGTGATACCTGTTCTCTATCGTAGAGTCCCATGTATTAGGCGAGGTGGGGTCCAGTTTGAGATTAAGGGAAATCCTTATTGGACACTTGTGTTGTTGTACAATGTAGGAGGTGCTGGTGATGTTAGAGATGTGAAGATCAAGGGTTCGAACACTGGTTGGGTTCAAATGTCGAGGAATTGGGGTCAGAATTGGGAGACTGGAGTGAACGTTTTAGGGCAAAGCCTGTCGTTTCAAGTTACTACAAGTGATGGAAAGATGTTCCAGTTTGATGATGTTGCTCCGAGGAATTGGAATTTTGGGCAGAGCTTTGGGGCAAAGAGCAACTTTTAG 801 46.57 MVASASFQNLLSWAVAMSILLVQAKCSRISTTAAAGQRVSHGWQEARATFYGDMNGGETMQGACGYGDLLKQGYGLETAALSTALFNNGLTCGACFEIVCNNDQQWCIPNAAPVRITATNFCPPNYTKTRDIWCNPPQRHFDLSMPMFTKLAHYRAGVIPVLYRRVPCIRRGGVQFEIKGNPYWTLVLLYNVGGAGDVRDVKIKGSNTGWVQMSRNWGQNWETGVNVLGQSLSFQVTTSDGKMFQFDDVAPRNWNFGQSFGAKSNF 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2877933 2878858 - Conep02aG0053200.1 Cone2ag0519 432986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0519 266 SUPERFAMILY Barwin-like endoglucanases 42 191 IPR036908 -
Cone2ag0519 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 173 IPR007112 -
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 82 100 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576(InterPro)
Cone2ag0519 266 Gene3D - 26 168 IPR036908 -
Cone2ag0519 266 PANTHER EXPANSIN-A15 24 263 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 183 262 IPR007117 -
Cone2ag0519 266 SMART dpbb_1 78 163 IPR007112 -
Cone2ag0519 266 CDD DPBB_EXPA_N 42 168 - -
Cone2ag0519 266 Gene3D - 173 266 IPR036749 -
Cone2ag0519 266 PRINTS Expansin signature 100 111 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 184 205 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 73 87 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 114 124 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 148 161 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 172 184 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 219 240 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 248 264 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 PRINTS Expansin signature 131 148 IPR002963 GO:0009664(InterPro)
Cone2ag0519 266 Pfam Lytic transglycolase 78 163 IPR009009 -
Cone2ag0519 266 Pfam Expansin C-terminal domain 174 251 IPR007117 -
Cone2ag0519 266 SUPERFAMILY PHL pollen allergen 170 260 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0494 Cone-Chr16:7031250 Cone2ag0519 Cone-Chr2:2877933 1.76E-143 dispersed
Cone2ag0519 Cone-Chr2:2877933 Cone5ag0142 Cone-Chr5:611803 3.38E-101 dispersed
Cone2ag0518 Cone-Chr2:2874278 Cone2ag0519 Cone-Chr2:2877933 2.76E-44 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0519 - - - 0.0