Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0531 ATGCCTTCTCTTCCCAACTTCTTCCCAACTTGGAAACCTGAGCTATGCCTTTCCGCCAAGAATTCAACAAACGATGACGCAGAGAGCAACAGCGAAGACAAACCAGTGTCGAATTCCACTTCATCATCGTCGGTCGAATGCTACGCCTGCACTCAAGTCGGCGTACCCGTCTTCCATTCCACCACCTGCGACCGGGTCCACCCCCCCGAATGGGAGGCATCCGCAGGGTCGTCTCTCGTCCCCATCCAGTTCAATCCAAACCAGCCAAGAAAGTCCGGTCCACGCCGCCCTTTGGGCCTCTTCGGCCGCGTTCTGGACCCGAGAAGCAAAACCATCCAGCGGTGGAACCGAGCGTTCTTACTGGCACGCGCCATGGCGTTAGCAGTTGATCCTCTGTTCTTCTATGCGCTGTCGATAGGAAGAGGCGGGACCCCGTGTCTTTATATGGACGGCGGCTTGGCGGCGATCGTGACCGTCGCTCACACGTGCGTGGATGCCGTGCATTTATGTCACTTGTGGTTGCAGTTCAAGCTGGCGTACGTGTCAAGGGAGTCCATGACTGTTGGGTGTGGGAAACTCGTGTGGGACGCACGTGCCATTGCTGCCCATTACGTGAGGTCGCTCAAAGGGTTCTGGTTTGATGCATTCGTCATTCTTCCTGTCCCTCAGGCCGTATTTTGGTTGATATTACCAAGGTTGATAAGACAAGAGAAAATCAAGCTCATAATGACAGTACTTCTGCTAATGTTCTTGTTTCAATTCCTTCCAAAAGTGTACCATTGCATCAGCTTAATGAGAAGAATGGGGAAGGTCACAGGCTACATCTTCGGCTCCATTTGGTGGGGTTTCGGCCTCAATCTCATCGCCTACTTCATCGCCTCTCATGTTGCAGGGGGGTGTTGGTATGTTCTTGCGATACAACGAGTAGCTTCGTGTTTGCAACAACATTGCGCGAGGAACAATTGTGATCTATCTCTCACTTGTTCGGAAGAGGTTTGTTACCAGTTGTTACAGGCGGGTGTGGTTGGGATTCCGTGTGGTGGGAATACGACAACTGCGGTGAGGAAGCCGTTGTGCTTAGATATTAACGGTCCGTTTCAGTATGGGATCTATAAGTCGGCACTTCCGGTTATTTCGGGGAATTCCCTTGCGGTCAAGATCCTTTATCCCATCTTTTGGGGTTTAATGGCTCTGAGCACATTCGGCAACGATCTTGAGCCAACGAGTAACTGGATCGAAGTGATCTTCAGCATTGCTATGGTGCTTAGCGGTCTACTTCTCTTCACTCTGTTGATTGGAAACATCCAGGTATTTTTGCATACTGTGATGGCAAAGAAGAGGAAAATGCGGCTAAGATGCCGAGAAATGGAATGGTGGATGCAAAGAAGACAGTTACCTTCTTGTTTAAGACATAGAGTCCGACATTATGAACGGCAAAGATGGACCGCCATGGGAGGAGATGATGAGATGGAGCTCATCAAAGACTTGCCCGACGGTTTACGTAGAGACATTAAGCGCTACCTCTGCCTAGACCTCATGAAAAAGGTACCCCTGTTTCACAACTTGGATGATCTTATTATCGACAACATATGTGATCGTGTTCGTCCCCTAGTATTCTCCAAAGACGAAAAGATTATTAGGGAAGGAGATCCAGTTCCGAGAATGTTGTTCATTGTGAGAGGACAAATACAAAGATGCCAAAGCCTAAGCAAGGGCATGATAGCTACAAGCACTATAGAACCAGGCGGGTTTTTAGGTGATGAGCTGTTGTTATGGTGTCTTAAACGTCCGTTTATTGACCGGCTTCCTGCCTCGTCTGCTACATTTGCATGTGTTGAACCGACAGAAGCATATGCCCTAGATGCTAATGATCTTAGGTACATAACGGATCATTTCCGGTACAAATTTGCGAATGAGAGGCTTAAGAGGACGGCTAGGTACTACTCTTCGAATTGGAGGACATGGGCTTCTGTGAACATACAGTTGGCTTGGAGACGCTACAGAATGAGGACTAGAGGTCCTGTGATTGCTGTGGGTGATGGTGATAGGAAGCTTCTGCAGTACGCTGCTATGTTTATGTCGATCCGGCCGCATGATCATCTCGAGTAA 2109 49.03 MPSLPNFFPTWKPELCLSAKNSTNDDAESNSEDKPVSNSTSSSSVECYACTQVGVPVFHSTTCDRVHPPEWEASAGSSLVPIQFNPNQPRKSGPRRPLGLFGRVLDPRSKTIQRWNRAFLLARAMALAVDPLFFYALSIGRGGTPCLYMDGGLAAIVTVAHTCVDAVHLCHLWLQFKLAYVSRESMTVGCGKLVWDARAIAAHYVRSLKGFWFDAFVILPVPQAVFWLILPRLIRQEKIKLIMTVLLLMFLFQFLPKVYHCISLMRRMGKVTGYIFGSIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQHCARNNCDLSLTCSEEVCYQLLQAGVVGIPCGGNTTTAVRKPLCLDINGPFQYGIYKSALPVISGNSLAVKILYPIFWGLMALSTFGNDLEPTSNWIEVIFSIAMVLSGLLLFTLLIGNIQVFLHTVMAKKRKMRLRCREMEWWMQRRQLPSCLRHRVRHYERQRWTAMGGDDEMELIKDLPDGLRRDIKRYLCLDLMKKVPLFHNLDDLIIDNICDRVRPLVFSKDEKIIREGDPVPRMLFIVRGQIQRCQSLSKGMIATSTIEPGGFLGDELLLWCLKRPFIDRLPASSATFACVEPTEAYALDANDLRYITDHFRYKFANERLKRTARYYSSNWRTWASVNIQLAWRRYRMRTRGPVIAVGDGDRKLLQYAAMFMSIRPHDHLE 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2929772 2933103 + Conep02aG0054400.1 Cone2ag0531 432998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0531 702 ProSiteProfiles cAMP/cGMP binding motif profile. 518 628 IPR000595 -
Cone2ag0531 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 102 670 - -
Cone2ag0531 702 SUPERFAMILY cAMP-binding domain-like 445 632 IPR018490 -
Cone2ag0531 702 Gene3D - 149 442 - -
Cone2ag0531 702 MobiDBLite consensus disorder prediction 19 42 - -
Cone2ag0531 702 SUPERFAMILY Voltage-gated potassium channels 107 439 - -
Cone2ag0531 702 Gene3D Helix hairpin bin 444 509 - -
Cone2ag0531 702 SMART cnmp_10 518 644 IPR000595 -
Cone2ag0531 702 CDD CAP_ED 518 628 IPR000595 -
Cone2ag0531 702 Pfam Cyclic nucleotide-binding domain 538 628 IPR000595 -
Cone2ag0531 702 Gene3D Jelly Rolls 516 634 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1209 Cone-Chr1:55940193 Cone2ag0531 Cone-Chr2:2929772 4.40E-263 dispersed
Cone2ag0531 Cone-Chr2:2929772 Cone2ag0610 Cone-Chr2:3700486 9.17E-120 dispersed
Cone16ag0485 Cone-Chr16:6972025 Cone2ag0531 Cone-Chr2:2929772 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0531 K05391 - rcu:8281281 1135.55