Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0548 ATGGAAAGTTCTATGAGCAGGAGAATGGAGAAGAGGAGCTGTGAAGAAGATGAAGCTGCTGCTGACCATATGCCTGAATCCAAGAAACAAAAATTGCCATCTTTGGCCAGCGTAATTGTGGAAGCTTTGAAGGTAGATAGCATGCAAAGACTTTGTTCCTCCTTAGAGCCTCTTCTTCGCCGAATTGTCAGTGAAGAAGTCGAATGCGCTTTGATGAAATTAGCACCCAACAAGTTGGATGGAAGAATGTCACCTCCAAGAATACGGGGTTCGGAAGGGCAAAACTTACAGCTTCATTTCAAAACGAGAATGCCACCTCATCTATTCACGGGAGGGAAGATAGAAGGAGAGCAAGGAGCGATCATTCATGTTGTTTTGCTAGACTCAAACAAGGGTTGTATCGTCCAAACCGGACCAGAATGCGGTGCAAAACTCAATGTTGTAGTCCTTGAAGGGGACTTTAATGAGGAAGTGGATGATGATTGGACAGAAGAACACTTTGAAAGCCATGAAGTTAAAGAACGGGGAGGGAAACGGCCAATATTGACCGGAGATCTGCAGGTGACCCTGAAGGGTGGGGTAGGGATGCTAGGAGATCTTACTTTTACAGACAATTCTAGTTGGATAAGGAGTAGGAAGTTCCGGCTCGGAGTTAAGGTTATTAGTGGTTGTTTTGAAGGTATTCGTGTTCGTGAGGGTAAAACCGAGGCTTTTACGGTTAAAGATCATCGTGGAGAATTGTACAAGAAACATTATCCACCCACCTTGCACGACGAAGTATGGAGATTAGATAGAATTGCAAAAGACGGAGCCCTCCACAAAAAATTGAGAACTGCCAAAGTTGCAACTGTCGAAGATTTCCTTCGCCTCTTGGTCAAGGATCCGCAAAGATTAAGAAGTATTCTCGGGAGTGGAATGTCGAACCGGATGTGGGAGAATACGGTGGAGCATGCCAAGACGTGTGTGTTGGGTAGGAAGCTCTATGTGTACTATGCAGATGACACTCATAGTATGGGTGCTCTTTTTAACCATATTTATGAGCTTAGAGGACTTATTGCTGATGGGCAATTTATACCTTTGGAATCTCTTACTCAAAATCAAAAGATATCGGTGGATTATCTCGTGAAGAGAGCATATAATAGTTGGCAACAAGTCATAGAATATGACGGCGAAATCCTAAACTCTATTGCAGCCAATAACAAGGCAGTTGAAGCATCTACTACAGTCATAACCAATCAAGATTACTCCCTAGACCACTACAGCAAAACTCCTCAAACCCTGCACCAATACATGCCCAACCACTACGTCTCCGAATCAGGCACACTTTTCCAACCGAGCCATGACCAACAACCAGTCCAAAAATGGATCGAAATCCCATTTGTGACATCCAGTCAGTCAGATTATGGGTCAGTCGATGGGTCATATTCTTCTGAAGAGTGGTCAAAACCAAGGAGTGGGCCCGATCCCCCAGGATTGGAAGAATATATTGCGGAGGAGATCCGGGCAAGGAGTTCGGAGATGTTGGGGAGTGATGATATGCAGAGACTGTTGTTGAGGACATTCAATATGGGAGCTGAGGTCCAATATGGATACTCCAACGAGCCAAGTAATTGTTATGATATGCATGATGAAGCTCGGATGGATCGGTCATTTGATCATGAACAAGTTCGTGGAAAGAGCTCAGGGAAGGCTGTAGTTGGATGGCTCAAACTTAAAGCCGCTTTGAGATGGGGGATTTTCGTACGGAAGAGAGTTGCAGAGAGGAGAGCTCAGATCACTGAATTAGATTAG 1791 44.61 MESSMSRRMEKRSCEEDEAAADHMPESKKQKLPSLASVIVEALKVDSMQRLCSSLEPLLRRIVSEEVECALMKLAPNKLDGRMSPPRIRGSEGQNLQLHFKTRMPPHLFTGGKIEGEQGAIIHVVLLDSNKGCIVQTGPECGAKLNVVVLEGDFNEEVDDDWTEEHFESHEVKERGGKRPILTGDLQVTLKGGVGMLGDLTFTDNSSWIRSRKFRLGVKVISGCFEGIRVREGKTEAFTVKDHRGELYKKHYPPTLHDEVWRLDRIAKDGALHKKLRTAKVATVEDFLRLLVKDPQRLRSILGSGMSNRMWENTVEHAKTCVLGRKLYVYYADDTHSMGALFNHIYELRGLIADGQFIPLESLTQNQKISVDYLVKRAYNSWQQVIEYDGEILNSIAANNKAVEASTTVITNQDYSLDHYSKTPQTLHQYMPNHYVSESGTLFQPSHDQQPVQKWIEIPFVTSSQSDYGSVDGSYSSEEWSKPRSGPDPPGLEEYIAEEIRARSSEMLGSDDMQRLLLRTFNMGAEVQYGYSNEPSNCYDMHDEARMDRSFDHEQVRGKSSGKAVVGWLKLKAALRWGIFVRKRVAERRAQITELD 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3074639 3078224 + Conep02aG0056100.1 Cone2ag0548 433015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0548 596 PANTHER OS02G0177800 PROTEIN 10 589 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone2ag0548 596 MobiDBLite consensus disorder prediction 465 481 - -
Cone2ag0548 596 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Cone2ag0548 596 MobiDBLite consensus disorder prediction 1 31 - -
Cone2ag0548 596 MobiDBLite consensus disorder prediction 465 491 - -
Cone2ag0548 596 MobiDBLite consensus disorder prediction 1 29 - -
Cone2ag0548 596 Pfam Calmodulin binding protein central domain 256 321 IPR046830 -
Cone2ag0548 596 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0548 Cone-Chr2:3074639 Cone2ag0623 Cone-Chr2:3944448 3.43E-193 dispersed
Cone16ag0460 Cone-Chr16:6858625 Cone2ag0548 Cone-Chr2:3074639 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0548 - - - 0.0