Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone2ag0552 | ATGCCAGACTATTGTAAGGTCTTAAAATTGACCAGGCTACTCACCGGTGAATCTCTACCTGTGACAAGGCATCCTGGAGATGAGGTTTTCTCCGGGTCGACTTGCAAGCATGGTGAGATTGAGGCTGTTGTCATCGCCACTGGGGTCCATACCTTCTTCGGCAAGGCTGCTCACCTTATCAAAAACACTAACCAAGTTGGTCACTTCCAAAAGGTTGCTACTCTCCTTGCTGTGCATGCAAACTGGGGCTTCGCTCGGATCAAAGGAATCGGGTGGGGATGGGCCGCAGTTATCTGGGTCTATAATCTCATTACTTACTTCCCACTTGATGTCCTTAAGTTCATGATCCGGTATGGATTAAGCGGCAAGGTCTGGGATAGTCTACTTGAAAACAAGACGGCATTCACGACAGAGAAGGATTACGGAAAGGGGGCGAGAGAAGCCCAATGGGCCACAGTGCAAAGGACTCTTCACGGTCTACAGCCCCCGGAAGCCCGTTTCGACGACAAGAGCAGTGGCGCAGTGCTTTCCGACATTGCCGAACAGGCCAAGACACATGCAGAAGTCTCCAGACTTAGAGAACTCCATACTTTGAAGGGACATGTAGAATCTGTAGTGAAGCTGATGGGGCTTGATCTTGAACACAACCAACAACACTATACAGTTTGA | 669 | 49.48 | MPDYCKVLKLTRLLTGESLPVTRHPGDEVFSGSTCKHGEIEAVVIATGVHTFFGKAAHLIKNTNQVGHFQKVATLLAVHANWGFARIKGIGWGWAAVIWVYNLITYFPLDVLKFMIRYGLSGKVWDSLLENKTAFTTEKDYGKGAREAQWATVQRTLHGLQPPEARFDDKSSGAVLSDIAEQAKTHAEVSRLRELHTLKGHVESVVKLMGLDLEHNQQHYTV | 222 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 3106710 | 3108556 | + | Conep02aG0056500.1 | Cone2ag0552 | 433019 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone2ag0552 | 222 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 12 | 75 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
| Cone2ag0552 | 222 | SUPERFAMILY | Calcium ATPase, transduction domain A | 12 | 60 | IPR008250 | - | |
| Cone2ag0552 | 222 | Gene3D | - | 10 | 64 | - | - | |
| Cone2ag0552 | 222 | Gene3D | - | 66 | 119 | - | - | |
| Cone2ag0552 | 222 | Gene3D | - | 175 | 222 | - | - | |
| Cone2ag0552 | 222 | Pfam | E1-E2 ATPase | 12 | 78 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone2ag0552 | Cone-Chr2:3106710 | Cone7ag1759 | Cone-Chr7:11619413 | 6.05E-72 | dispersed | |
| Cone16ag0451 | Cone-Chr16:6825967 | Cone2ag0552 | Cone-Chr2:3106710 | 3.62E-85 | wgd | |
| Cone2ag0552 | Cone-Chr2:3106710 | Cone4ag0618 | Cone-Chr4:2846097 | 5.01E-68 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone2ag0552 | K01535 | - | csv:101214655 | 246.128 |