Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0575 ATGGAATTGTTACGAAAATTGTTCTATAGGAAGCCGCCTGACGGTCTTCTTGAGATTTCCGAGAGAGTTTTCGTTTTCGATTGCTGCTTTTTACCGGGTACATGGAAAGGAGAGAACTACAAAAACCACATAAGCAGTATAGTAAGTCAACTAAAGGATCACTTTCCAGATTCAGCCCTCTTAGTATTCAATTTTGGAGAAAAAGAATCACATGCTCAAATGGCCGATATATTTTCCTCATACGACATAACCGTAATGGACTATCCCCGCCACTACAAGGGCTGCCAGTTACTCACCATCGACCTGGTCCAGCATTTTTTAAGATCAAGCGAAAGCTGGCTCTCTCTCGGTCAACACAACGTGCTCCTGATGTACTGTGAACCTGGCGCATGGCCCGTTTTGGCGTTCATGCTGGCTGCACTGATGATTTACAGAAAGCAGTATAGTGGGGAGCAGAGAACATTGGACATGGTGTACAGGCAAGCTCCAATGGAGCTTTTGCACTTGTTGTCTCCTATGAATCCTATGCCGTCTCAATTGAGGTATTTGCAGTATATATCGAGGAGGAATGTGGCTTTAGACTGGCCCCCTTTGGATCGAGCACTTGCTTTAGACTGTATTATTTTGAGATGTATTCCTAGTTTTGATGGAGATGGTGGGTGCAGACCTATGTTTAGGGTCTATGGACAAGATCCGTTTCATAGCACAGATCAGAATGCTAAAGTTCTGTTTCCTACTCAGAAAAGAAGCAAAGCTGTCAGGGTTTACAAGCAGTCAGAGTGTGAACTGGTTAAAATTGACATCCATTGCCATATTCATGGTGATATCGTGGTGGAGTGTGTTCACTTGAAAGATGACATGGAAAGTGAAGAGACAGTGTTCCGAATCATGTTCAACACAGCTTTCATTCGCTCCAATATCTTGATCCTTTCCCGCGACGAGGTCGACATGTCATGGAATGCTAGGGACCGCTTCTCAAAGGATTTCAGAGCAGAGATTATTTTCTCTGAGATGGATGCTGCTGCTTCATATGTGGCGAATCATATCTCGTGCTTTGAGGAGGAAGGCCTTCTTCCAATTGAAGCATTTGCTAAAGTCCAAGATATCTTTAGTCATGTGGACTGGTTAAGTCCAAGGGCAGATGCTACCCTTCCTATGCTTCAGCAAATGAGTATATCAAATTTGGGTCATGAAAACTTAGATACTGATTCTCACCCGATAATGCACAGCAGTTCCTTATTCCGGAATAAGAGTTCTAGAAGGCTTCAAGAGGAAAAACAGACCCAAGTCTTGGAAAATGATGCTAATAGCCCCCAGAAGATATCATCGCCATCTTCAGATCAGAGTGGGACCCCAGCTGTTGGCATAAAATGTCTGTTATCTGATAAAGAAGAAAGTATAAGCTCTTCGCCTGAAGTTTTGGCTAGTCCAGACTCGAATACAGTAATTTTAGGTGCATATAAATATGATACAGAGAGTGTCTCCATAGAACCAGTAACTCCATTCCTACCTCCATCATCCTTGAGAGCTCCTTTTGGAGGTTCGGAATGTGGTTCATCTCCGTCCCCAACTCCATCCCTTCATATTCATAGTTGGTCAGCTTTGAAACCCACACAAACTTCACTCATAACAGAGTCTGAAGTCTATTCAAGTACCAAATCTGGTGATGCGTTACTAAGTCCTCAAACTCCTCCGAAACTTACCTCACTACTTCGGGTTTCGCCTCCAACACCAACTTCATCACCACCTCCTCTTCCTCCTGCAACACCATCTTTGAAGGAAAATGTAGTTTCTGGACTTGTATCTTCACCACCTACACCTCTTTCTCATTCTCCTCATAAAGCATCAGAGCCTACAATCTCTTTGCCAGCTCTGTCACCCATGCCACCACCCCCTCCTCCACCGTATCAGCAAGATGGGGATAGAAAATCTTCATTTCTATCACCGCCACTGTTGCCACCTCCTCCTCAACCATCTGGGGTGGCACCACCACCACCTCATCCTCCCCAACCATCTAGGGCAGCACCATCACCACCGCCTCTTCCTTCCAAATCATTTGGGTCAGCACCACTACCACCACCACTAACTCCTCTTCCTTCTGCCCAACCATCTAGGGTGGCTCCACCACCATCACCTCCTCCTCCTCAACCATCCGGGGTGGTAGCACCACCTCCTCCTCCCTACCCATCTGGGGTGGTACCATCACCACCACCTCCTCCTCTCCAACCATCTAGGGCAGCACCATCACCACCACCTCTTCCTCCTGCCCAACCATCTAGGGTGGCTCCACCACCACCACCTCCTCCTCAACCATCTGGGGCGGCGTTACCAGCCCCACCACCGCCCATCAGCACAGTTTCCTCTTCTATACCTTGTGTACCCCCTCCACCAGCTCCCTTGGGTAATGGAGTTTCAAAGGCAAGTAGATCTCCATCTTCTTCCACGCCTGGAACTCCTTTTGGTTCTCCTCCGACTGCAAAGGCACGTGGTCTGTCACGGACAATAAGTTCAAAAAGCCATATAACCAAAAAATTGAAGCCACTGCATTGGTTGAAACTGACGAGAGCAGTGCAAGGAAGCTTATGGGCTGAGACTCAAAAATCTGGTGAAGCTGCCAAAGCTCCAGAGATTGACATGTCAGAGCTTGAAAGTCTGTTTTCAGCAGCAGTTCCTAGTTCGGATAAAAGCAAGAAATCAAGTGTGCGTGGTCCAGTTGGAACTAAACCTGATAAAGTGCAGCTGATCGATCTCAGAAGAGCATACAACTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCAATTCATGACTTGATGAGCTCAGTACTCGCTCTTGAAGATTCGGCCATTGATAATGATCAGGTTGATAACCTTATAAAGTTTTGTCCAACAAAAGAGGAGATGGAACTGCTTAAGGGATACACTGGAGAAAAGGAAAAACTTGGAAGATGCGAACAGTTTTTTCTCGAGTTACTGCAAGTACCACGTGTGGAATCTAAACTCAGAGTTTTTTCATTTAAGATGCAGTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTAAATATTGTGAAGTCTGCATCAGAAGAGATAAGGAATTCTTCCAAATTGAAGAGAATTATGCAGACAATTCTTTCACTAGGAAATGCTTTGAACCAAGGAACTGCTAGAGGCTCTGCCATTGGTTTTAGGCTAGATAGTCTTCTTAAACTGACCGAGACGCGTGCAAGGAACAACAGGATGACTCTCATGCATTACCTTTGCAAGATGCTTTCAGACAAGTTGCCAGAAGTTCTGGATTTTTCTAAAGATCTGGAAAGCCTGAAATCTGCATCAAGGATACAATTGAAACCTATAGCAGAAGAAATGCAAGCAATAAGCAAAGGATTGGAGAAAATTGTTCAAGAACTATCCTGTTCTGAAAGTGACGGGCCTATATCTGACAACTTCCTTAAGATCTTAAAGGAGTTCCTCAGCTATGCTGAAGCAGAAGTGAGATCTTTGGCTTCACTGTATTCTAGTGTGGGTAGAAATGTGGATGCATTGATTTTTTATTTTGGAGAAGATCCAGCTTGCTGCCCATTTGAACAAGTGATTTCGACAATTCTTAACTTTGAAAGAATGTTCATCCGGGCCCACTATGAAAACCGCAAGCAGCTTGAGCTTGAGATGAAGACATCAGCCGACAGTAATGGACCAAAACCAAAACCAAAGACAAATGTTTCGCACAAGGAGACAGCCTAG 3741 44.91 MELLRKLFYRKPPDGLLEISERVFVFDCCFLPGTWKGENYKNHISSIVSQLKDHFPDSALLVFNFGEKESHAQMADIFSSYDITVMDYPRHYKGCQLLTIDLVQHFLRSSESWLSLGQHNVLLMYCEPGAWPVLAFMLAALMIYRKQYSGEQRTLDMVYRQAPMELLHLLSPMNPMPSQLRYLQYISRRNVALDWPPLDRALALDCIILRCIPSFDGDGGCRPMFRVYGQDPFHSTDQNAKVLFPTQKRSKAVRVYKQSECELVKIDIHCHIHGDIVVECVHLKDDMESEETVFRIMFNTAFIRSNILILSRDEVDMSWNARDRFSKDFRAEIIFSEMDAAASYVANHISCFEEEGLLPIEAFAKVQDIFSHVDWLSPRADATLPMLQQMSISNLGHENLDTDSHPIMHSSSLFRNKSSRRLQEEKQTQVLENDANSPQKISSPSSDQSGTPAVGIKCLLSDKEESISSSPEVLASPDSNTVILGAYKYDTESVSIEPVTPFLPPSSLRAPFGGSECGSSPSPTPSLHIHSWSALKPTQTSLITESEVYSSTKSGDALLSPQTPPKLTSLLRVSPPTPTSSPPPLPPATPSLKENVVSGLVSSPPTPLSHSPHKASEPTISLPALSPMPPPPPPPYQQDGDRKSSFLSPPLLPPPPQPSGVAPPPPHPPQPSRAAPSPPPLPSKSFGSAPLPPPLTPLPSAQPSRVAPPPSPPPPQPSGVVAPPPPPYPSGVVPSPPPPPLQPSRAAPSPPPLPPAQPSRVAPPPPPPPQPSGAALPAPPPPISTVSSSIPCVPPPPAPLGNGVSKASRSPSSSTPGTPFGSPPTAKARGLSRTISSKSHITKKLKPLHWLKLTRAVQGSLWAETQKSGEAAKAPEIDMSELESLFSAAVPSSDKSKKSSVRGPVGTKPDKVQLIDLRRAYNCEIMLSKVKVPIHDLMSSVLALEDSAIDNDQVDNLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELLQVPRVESKLRVFSFKMQFQSQVSDLRKSLNIVKSASEEIRNSSKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNRMTLMHYLCKMLSDKLPEVLDFSKDLESLKSASRIQLKPIAEEMQAISKGLEKIVQELSCSESDGPISDNFLKILKEFLSYAEAEVRSLASLYSSVGRNVDALIFYFGEDPACCPFEQVISTILNFERMFIRAHYENRKQLELEMKTSADSNGPKPKPKTNVSHKETA 1246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3333078 3341466 - Conep02aG0058800.1 Cone2ag0575 433042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0575 1246 ProSiteProfiles Formin homology-2 (FH2) domain profile. 835 1234 IPR015425 -
Cone2ag0575 1246 Pfam Formin Homology 2 Domain 840 1208 IPR015425 -
Cone2ag0575 1246 SUPERFAMILY Formin homology 2 domain (FH2 domain) 909 1225 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 648 801 - -
Cone2ag0575 1246 Gene3D Formin, FH2 domain 833 1219 IPR042201 -
Cone2ag0575 1246 SMART it6_source 835 1244 IPR015425 -
Cone2ag0575 1246 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Cone2ag0575 1246 SMART PTEN_C2_2 197 337 IPR014020 -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 547 839 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 595 616 - -
Cone2ag0575 1246 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 338 IPR035892 -
Cone2ag0575 1246 Gene3D Protein tyrosine phosphatase superfamily 15 197 IPR029021 -
Cone2ag0575 1246 PANTHER FORMIN-J 1 1226 IPR051144 -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 547 575 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 805 821 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 421 453 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 1223 1246 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 576 590 - -
Cone2ag0575 1246 Gene3D - 198 341 - -
Cone2ag0575 1246 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 623 638 - -
Cone2ag0575 1246 MobiDBLite consensus disorder prediction 429 452 - -
Cone2ag0575 1246 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0324 Cone-Chr20:1435871 Cone2ag0575 Cone-Chr2:3333078 0 dispersed
Cone2ag0575 Cone-Chr2:3333078 Cone8ag0537 Cone-Chr8:3939933 8.89E-266 dispersed
Cone2ag0575 Cone-Chr2:3333078 Cone17ag0984 Cone-Chr17:7577492 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0575 K28090 - rcu:8276566 651.744