Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0580 ATGTTGGATTGTGGTTACAAGGCACAATACATGGGTGGCCAGCGAGAAAAATTTGCTAGGCTGGATGACTTGGACTCGAGGCTGTCATCACCTTCTGATAATGTAGTTAGAACATGTGGCTTTAATATGGATGGAATTAGCCGCGTTGTCCATGGAAGTGATAAAGCATCTGGATCTTTTAAGAAAGGAATGAGAAGAGGATCTGAAGGACTTAAGTCAATTGGGCGATCTCTCAAATTTGGGGTTTCTCGAGCTGTGTTCCCAGAAGATCTAAAAGTTGTAGAGAAGAAGATATTTGATCCTCAAGACAAGTTCCTCCTGTTTTGGAATAAACTTTTTGTAATTTCATGCATTTTGGCAGTTTCTGTGGACCCTTTATTTTATTATCTTCCTGTCATCAATTCATCACTGAATTGTCTTGGTATTGATAGAAGGTTAGCTATCATAGTGACAACATTGAGGACAATTGTCGATGCTTTCTATCTTATTCACATGGCTCTCCAGTTCCGGACAGCTTATATTGCCCCATCATCTCGGGTTTTTGGAAGAGGCGAACTTGTGATTGATTCTGCCAAAATTGCCAAGCGATACTTGCAGCAGTATTTCATCGTGGATTTCCTTTCTGTGCTACCCCTACCACAGATTGTTGTGTGGAGATTTTTTCAGAGGTCAAGAGGTTCCGATGTTTTTGCAACAAAACAGGCCTTATTGTTTATCGTCTTACTTCAATATATCCCAAGATTTCTTCGAATTTTACCATTAACTTCGGAATTGAAGAGGACCGCTGGTGTCTTTGCTGAAACTGCTTGGGCAGGTGCTGCATATTATCTGCTATTATATATGCTTGCTAGTCATATAACTGGCGCATTCTGGTACTTGTTAGCAATAGAACGCAATGATACTTGCTGGCAAGAGGCTTGTCGTGGGGACTGCAAAACAGATTTTTTGTATTGCGGCAACCAGAACATGGAAGGTTATGAGACTTGGAAAGATCGCGGAGTTTCTTTTCTTCAGTCAAATTGCACAACTGATGGTGATAATCCACCATTTGATTTCGGAATCTACGCACAGGCTTTGTCGTCTGGCATTGTTTCGTCCAAGAAGTTCATATCCAAATATTGTTATTGTTTATGGTGGGGACTACAAAACTTAAGTACACTTGGTCAGGGGCTTCAAACTAGCATCTATCCTGGAGAAGTGATATTTTCCATATTATTGGCTGTAGCTGGACTGATCCTCTTTGCACTTCTTATTGGGAACATGCAGACCTATCTTCAATCTCTGACTATAAGGCTTGAGGAAATGAGAGTTAAAAGGCGTGACTCAGAGCAATGGATGCATCATCGCTTGCTGCCACAGGACCTTAGGGAAAGGGTTAGGCGTTACGATCAGTATAAGTGGTTGGAAACCCGTGGGGTCGATGAAGAAAGTTTGGTTCAAAGTCTCCCAAAGGATCTTAGGAGAGATATCAAGCGGCACCTTTGTCTGGCTTTAGTGAGACGGGTTCCTCTATTCGACAACATGGATGAGAGATTACTTGATGCCATATGTGAGCGGCTAAAACCATGTCTATTCACTGAGAGCACTTACATAGTCCGGGAAGGTGACCCAGTCGACGAGATGCTTTTCATTATCCGGGGCCGCCTAGAGAGTGTAACCACAGACGGAGGGAGAAGTGGATTCTTCAATCGGAGTTTTCTAAAAGAAGGTGACTTCTGTGGTGAGGAGCTTCTCACGTGGGCCCTAGACCCCAAATCTGGTTCCAACCTCCCTTCCTCGACCCGGACTGTTAGAGCCATTACTGAGGTTGAAGCCTTTGCTCTAATAGCTGAGGAGTTAAAATTTGTGGCGGGTCAATTCCGAAGGCTCCACAGCAGACAGGTTCAACACACTTTTCGGTTTTACTCTCAACAATGGAGGACTTGGGCCGCTTGCTTTATCCAAGCTGCTTGGCGTAGATATTGCAAGAGGAAGGCTCTGGAGCTCCGTCGAAAAGAGGAGGAGGAAGAAGAAGCCAGAGAAGGTGGGTCCCACAATGGTGGCAGTGGTTCATATAGTCTTGGAGCGACGCTCTTGGCCTCAAGATTTGCCGCAAATGCTCTCCGGGGTGTTCATAGATACCGGAATGCTAAGACTGCTAAAGAGTTGGTGAAATTGCAGAAGCCTCCTGAGCCAGATTTTACTGCTGAGGATACCGAATGA 2202 44.23 MLDCGYKAQYMGGQREKFARLDDLDSRLSSPSDNVVRTCGFNMDGISRVVHGSDKASGSFKKGMRRGSEGLKSIGRSLKFGVSRAVFPEDLKVVEKKIFDPQDKFLLFWNKLFVISCILAVSVDPLFYYLPVINSSLNCLGIDRRLAIIVTTLRTIVDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAKIAKRYLQQYFIVDFLSVLPLPQIVVWRFFQRSRGSDVFATKQALLFIVLLQYIPRFLRILPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHITGAFWYLLAIERNDTCWQEACRGDCKTDFLYCGNQNMEGYETWKDRGVSFLQSNCTTDGDNPPFDFGIYAQALSSGIVSSKKFISKYCYCLWWGLQNLSTLGQGLQTSIYPGEVIFSILLAVAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFDNMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVRAITEVEAFALIAEELKFVAGQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKALELRRKEEEEEEAREGGSHNGGSGSYSLGATLLASRFAANALRGVHRYRNAKTAKELVKLQKPPEPDFTAEDTE 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3369644 3375581 - Conep02aG0059300.1 Cone2ag0580 433047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 399 410 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 467 474 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 373 390 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 417 426 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone2ag0580 733 Pfam Ion transport protein 108 430 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0580 733 Pfam Cyclic nucleotide-binding domain 525 613 IPR000595 -
Cone2ag0580 733 FunFam Cyclic nucleotide-gated ion channel 1 431 495 - -
Cone2ag0580 733 MobiDBLite consensus disorder prediction 714 733 - -
Cone2ag0580 733 Gene3D Jelly Rolls 502 622 IPR014710 -
Cone2ag0580 733 ProSiteProfiles IQ motif profile. 640 669 - -
Cone2ag0580 733 CDD CAP_ED 504 635 IPR000595 -
Cone2ag0580 733 Gene3D - 110 429 - -
Cone2ag0580 733 SUPERFAMILY cAMP-binding domain-like 433 623 IPR018490 -
Cone2ag0580 733 Gene3D Helix hairpin bin 432 495 - -
Cone2ag0580 733 FunFam Cyclic nucleotide-gated ion channel 1 502 620 - -
Cone2ag0580 733 ProSiteProfiles cAMP/cGMP binding motif profile. 504 588 IPR000595 -
Cone2ag0580 733 SMART cnmp_10 504 635 IPR000595 -
Cone2ag0580 733 SUPERFAMILY Voltage-gated potassium channels 100 426 - -
Cone2ag0580 733 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 720 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0027 Cone-Chr15:201417 Cone2ag0580 Cone-Chr2:3369644 1.57E-262 dispersed
Cone17ag0275 Cone-Chr17:1299404 Cone2ag0580 Cone-Chr2:3369644 0 dispersed
Cone18ag1018 Cone-Chr18:7534518 Cone2ag0580 Cone-Chr2:3369644 3.10E-195 dispersed
Cone20ag1136 Cone-Chr20:7746875 Cone2ag0580 Cone-Chr2:3369644 0 dispersed
Cone2ag0580 Cone-Chr2:3369644 Cone2ag0610 Cone-Chr2:3700486 8.74E-243 dispersed
Cone16ag0413 Cone-Chr16:6539623 Cone2ag0580 Cone-Chr2:3369644 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0580 K05391 - csv:101219180 1216.06