Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0587 ATGAAGCAAATACGATTCCTTAAGTTTCTTGTTCGCCTGCATGTCCTGATTCTTGGTGGGCCACGTGCTTTAAGACATGGAGGACCAGCCCATGCTGCAGCCAGAGCTGAGGTACCATGGTCAGCAAGAAGAGGGAATCTCTCTGAAAAGGAACAAGTATCGAGGACTGTAAAAGGGATATTGAACAAGCTGACTCCTACAAACTATTATCGTCTCAAGGTTCGGTTAATTCATTCCGGCATTACATCAGCTGATATCTTGGAGGATGTTAGTTTGATGATTTATAACAAAGCTGTAACCGAACCTGCATATTGCTCCTTGTATGCTCATCTGTGTTCTGACCTTAGTTATGGACTCCCTCCATTTGAATCCAATGAGCCAGGTGGAAAAGTAATTACTTTAAAGAGAAACCTTTTAGATCTCTGCCAGGAAGTGTTTCAAGGCTGTGATAAATTAAGTGAAGAAGTGAGGCAAATGATTTCCCCTGAAGAAGAGAAGGAGCGTAGGGTGAAAGAACAACATATGAAGCTTCGGACCCTTGGGAATATCCGTTTTATTGGACAGCTTTTTAAGCTGAAGATGGTTCCAGAGAAGATTGTCCATCACATTGCTCAGGAGCTTCTTGGAAGTGATGGTAAGACCTGGCCTGTAGAGGGGAACATTGAGGCCATATGTCTGCTCCTTAAGACCATAGGTAAGCAGTTTGATGAGAGTCCAAAGTTGCGCCTTATGAATGACAAGTACTTTACCGCATTGGAGGAACTTTCTGGAAACTCTCAACTTCCACCTAGACTTAGGTTCATGGTTCATTATGTTCTTGATTTACGCGCCAACAGCTGGGTTCCTAAATGTGATGAGGAAGGACCAGCTCATGTTACAGCCAGGGCTGATGTACTGTGGTCAGCAAGAAGAGGGAATCTCAATGAAAAGAATCAAGTCTTAAGGACTGTAAACGGGATACTGAACAAGCTGACTCCTACAAACTATGATTGTCTCAAGGTTTGGCTAATTAATACCGGCATTACATCTGCTGATATCTTGGAGGTGGAAAAACTTTACGGAGTTGAAGAAGTAGGGCAAGTGATTGCCCCTGAACAAGAGGAGTGTAGGAAGAAAGAACAACTCGTCAAGCTTCAGACCCTTGGGAATATCCGTGTTATGGGTGAGCTTTTCAAGCAGAAAATCGTTACAAGGAAGATTGTCCATGAAATTGTTCAGAAGCTTCTTGGAAGGGATGATGAGATCTGCCCTGTAGAGGAAAATGTTGAGGCCATATGTCTGCTCTTTAATACCATTGGCAAGCAACTTGACGAGGCTCTAATGGGGCGTCCTTTTATTGACAAGTACTTTAGCCGATTGGAGGAACTCTCTAGAAATTCTCTACTTTCACCACGACTTAGGTTCATGGTTTGCGATGTCCTTGATTTGCGTGCCAACAACTGGTTTCCTAAACGTGAAGAGGTAAAAGCCAAAACCATCTACGAGATACGCGCAGAAGCAGAAAGGGATGTACGACTCCGTTACAGCAGTTCTCCTAGAATTAGATACAATCATGGCGTCAAGGTTCTAGTCCTCTAG 1578 43.54 MKQIRFLKFLVRLHVLILGGPRALRHGGPAHAAARAEVPWSARRGNLSEKEQVSRTVKGILNKLTPTNYYRLKVRLIHSGITSADILEDVSLMIYNKAVTEPAYCSLYAHLCSDLSYGLPPFESNEPGGKVITLKRNLLDLCQEVFQGCDKLSEEVRQMISPEEEKERRVKEQHMKLRTLGNIRFIGQLFKLKMVPEKIVHHIAQELLGSDGKTWPVEGNIEAICLLLKTIGKQFDESPKLRLMNDKYFTALEELSGNSQLPPRLRFMVHYVLDLRANSWVPKCDEEGPAHVTARADVLWSARRGNLNEKNQVLRTVNGILNKLTPTNYDCLKVWLINTGITSADILEVEKLYGVEEVGQVIAPEQEECRKKEQLVKLQTLGNIRVMGELFKQKIVTRKIVHEIVQKLLGRDDEICPVEENVEAICLLFNTIGKQLDEALMGRPFIDKYFSRLEELSRNSLLSPRLRFMVCDVLDLRANNWFPKREEVKAKTIYEIRAEAERDVRLRYSSSPRIRYNHGVKVLVL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3423742 3428044 - Conep02aG0060000.1 Cone2ag0587 433054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0587 525 Pfam MIF4G domain 55 278 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0587 525 Pfam MIF4G domain 369 480 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0587 525 Gene3D - 46 281 - -
Cone2ag0587 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 293 348 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Cone2ag0587 525 SMART if4_15 54 279 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0587 525 SMART if4_15 314 480 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0587 525 SUPERFAMILY ARM repeat 307 481 IPR016024 -
Cone2ag0587 525 Gene3D - 350 493 - -
Cone2ag0587 525 SUPERFAMILY ARM repeat 47 282 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0976 Cone-Chr17:7547006 Cone2ag0587 Cone-Chr2:3423742 1.05E-102 dispersed
Cone20ag0318 Cone-Chr20:1410362 Cone2ag0587 Cone-Chr2:3423742 1.05E-102 dispersed
Cone2ag0587 Cone-Chr2:3423742 Cone7ag0426 Cone-Chr7:1891171 1.14E-42 dispersed
Cone2ag0587 Cone-Chr2:3423742 Cone4ag0588 Cone-Chr4:2701407 1.61E-98 wgd
Cone2ag0587 Cone-Chr2:3423742 Cone7ag0559 Cone-Chr7:2686118 4.79E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0587 K03260 - cit:102615214 341.273