Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0608 ATGACCGTTCCAGGCATGATTTCAGAATTTGAAGAAACAGAACAAGAAGGGAAAATAAAAAATCTTCAGAAATCGAATTCCGATCCGGACTCCTCGGTTTCCCAAGAACGCAGAATCATCGTCGCGAACCAGTTACCGATTCGAGCTCAATTCGACAGGGAGAATTCCAAATGGCGGTTCGAGTTAGACCCAGATAGTCTCGTTCTTCAGCTCAAAGATGGCTTCTCGCCTGACGTAGAAGTCATTTACGTTGGCTCGTTAAAAGCAGATATCGACTCGAAAGACCAAGAAGAAGTGGCTCAAACCCTACTCGATCAATTCCGGTGCGTGCCCACTTTCTTGCCTTTAGAAACTCAAAACGATTTCTACCACGGTTTCTGTAAACACTATCTATGGCCTCTGTTTCATTACATGCTTCCTATCTCTTCCTCTCATGGAGAGCGGTTCAACCGGGCTCACTGGAAAGCCTACGTGTCGGCTAACAAGATCTTTGCCGATAAAGTCATGGAGGTATTAAACCCCGACGAGGATTACGTCTGGGTCCATGATTATCATCTCATGATCTTACCCACTTTTTTGAGGAAAAGATATCACAGAGTCAAGCTAGGTTTCTTCCTGCATAGTCCTTTCCCTTCTTCTGAAATTTACCGGACCCTACCGATTCGTGACGATATTTTACGGGCTCTGTTAAACTGCGATCTAATCGGGTTCCATACTTTTGATTATGCCAGACACTTCCTGTCTTGTTGTAGTAGAATGCTTGGTCTGGATTACAAATCGAAGAGGGGCTATATAGGACTAGAATATTATGGCCGGACTGTAAGTATTAAGATCTTACCGGTTGGAATTCACATGGGCCAGCTTGAATCCATCTTATCCCTACCAGAAGCGGCCGAAAAAGTTAGAGAATTGAAGGAACAATTCAAAGGGAAAACTGTTATGTTAGGGGTTGATGATATGGACTTGTTTAAAGGAATCAGCTTGAAGTTTCTTGCAATGGGGCAGCTTCTAAAACAGCATACGGATCTAAGGGGTGAAGTTGTTTTAGTCCAAATCACTAACCCGGCAAGAAGCCAAGGCAGAGACGCACAAGATGTTGAAAATGAGATCAGATCTATTGCCGAAGATATCAATTTTAAATATGGCTATCCGGGTTATCAACCGATTAATTTTACAAATGGACCCGTCACGACTTTAGAGAAGGCGGCCTATTACGCGATCTCAGAATGTTGTGTTGTGAATGCTGTAAGAGATGGTATGAATTTGGTTCCATACAAGTACACAGTTTCTAGACAGAAGAGCCCGGTTTTGGGTAAGGAGGAGAACATGGGCACCCGAAAGAGTGTTATAATTGTGTCAGAATTTATTGGGTGCTCGCCTTCTTTAAGTGGGGCCATCCGGGTGAACCCATGGAACATAGATGCGGTTTCCGAAGCGATGAATCTGGCCATTACAATGCCGGAATTGGAAAAACAGTTGCGGCATGAGAAGCATTATAAGTATATAAGCTCACATGATGTGGCTTATTGGGCCCGGAGTTTCGATCAAGATCTGGGACGTGCCTGTCAGGATCATTACAATAAGAGGTGTTGGGGAATTGGGTTTGCGTTGGGCTTTAGAGTCGTCGCGTTGGGCCCGAATTTCCGGAAGCTTTCTGTTGAACATATTTGTGTGGGCTATAGGAATACAAAAAGCCGGTTGATTCTGTTGGATTATGATGGGACCGTGATGTCTCAGAGCTCAGTCGATAAAACTCCGAGCAAGGAAGTTATAACTGTCTTGAACAGTTTGTGTAGCGACCCTAAAAATGTGGTTTTCATAGTGAGTGGGAGGGGGAAAGATTCTCTCAGCAAGTGGTTCTCTCCTTGTGAGAAACTAGGTCTTTCTGCAGAGCATGGATACTTCACTAGGTGGACTAGGGATTCTTCATGGGAAACTTGCTCTATGGCGATGGACTTTGATTGGAAGAAGACTGTGGAACCGGTTATGGCTCTATACACCGAGGCTACTGATGGGTCTTTTATCGAACAGAAGGAAAGTGCTATTGTTTGGCATCATCAAGAAGCAGACCCAGATTTCGGCTCGTCTCAAGCTAAAGAGCTTCTAGATCATCTAGAGAATGTGCTCGCTAATGAACCTGTAGTTGTCAAACGAGGCCAACACATTGTCGAAGTTAAACCTCAGGGTATAAGTAAAGGAAGAGTTGTGGAGAATCTGATATCGTCTATGAGGAGTAATGGGAAGAGTCTTGATTTTGTGCTGTGTATTGGAGATGACCGATCAGATGAAGACATGTTTGAAAGTATTGCTCGGTCAGTTTCCGACCTTTCTTTGCTGGCTATAAAGGAAATGTTTGCTTGCACTGTGGGTCAGAAACCAAGCATGGCTAAGTACTATCTTGATGATACGGTGGAGGTGATCAACTTGATCGAAGGACTGGCTGCGGTTTCGGACCCACCAAAGGCGCAGAAACAGAAACCGGGGAGTGTGGATGGCAGATCTTCGTTTGAGGGGTTGTTTATATGA 2526 44.38 MTVPGMISEFEETEQEGKIKNLQKSNSDPDSSVSQERRIIVANQLPIRAQFDRENSKWRFELDPDSLVLQLKDGFSPDVEVIYVGSLKADIDSKDQEEVAQTLLDQFRCVPTFLPLETQNDFYHGFCKHYLWPLFHYMLPISSSHGERFNRAHWKAYVSANKIFADKVMEVLNPDEDYVWVHDYHLMILPTFLRKRYHRVKLGFFLHSPFPSSEIYRTLPIRDDILRALLNCDLIGFHTFDYARHFLSCCSRMLGLDYKSKRGYIGLEYYGRTVSIKILPVGIHMGQLESILSLPEAAEKVRELKEQFKGKTVMLGVDDMDLFKGISLKFLAMGQLLKQHTDLRGEVVLVQITNPARSQGRDAQDVENEIRSIAEDINFKYGYPGYQPINFTNGPVTTLEKAAYYAISECCVVNAVRDGMNLVPYKYTVSRQKSPVLGKEENMGTRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVSEAMNLAITMPELEKQLRHEKHYKYISSHDVAYWARSFDQDLGRACQDHYNKRCWGIGFALGFRVVALGPNFRKLSVEHICVGYRNTKSRLILLDYDGTVMSQSSVDKTPSKEVITVLNSLCSDPKNVVFIVSGRGKDSLSKWFSPCEKLGLSAEHGYFTRWTRDSSWETCSMAMDFDWKKTVEPVMALYTEATDGSFIEQKESAIVWHHQEADPDFGSSQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGISKGRVVENLISSMRSNGKSLDFVLCIGDDRSDEDMFESIARSVSDLSLLAIKEMFACTVGQKPSMAKYYLDDTVEVINLIEGLAAVSDPPKAQKQKPGSVDGRSSFEGLFI 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3682922 3685678 + Conep02aG0062100.1 Cone2ag0608 433075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0608 841 Gene3D - 568 800 IPR023214 -
Cone2ag0608 841 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 30 289 - -
Cone2ag0608 841 NCBIfam trehalose-phosphatase 564 813 IPR003337 GO:0005992(InterPro)
Cone2ag0608 841 MobiDBLite consensus disorder prediction 818 841 - -
Cone2ag0608 841 CDD GT20_TPS 37 518 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone2ag0608 841 FunFam Trehalose-6-phosphate synthase 2 649 728 - -
Cone2ag0608 841 NCBIfam HAD-IIB family hydrolase 567 771 IPR006379 -
Cone2ag0608 841 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 565 682 - -
Cone2ag0608 841 Gene3D Glycogen Phosphorylase B; 29 290 - -
Cone2ag0608 841 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 17 816 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cone2ag0608 841 Pfam Glycosyltransferase family 20 37 518 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone2ag0608 841 FunFam Alpha,alpha-trehalose-phosphate synthase 291 503 - -
Cone2ag0608 841 Gene3D Glycogen Phosphorylase B; 291 503 - -
Cone2ag0608 841 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 695 826 - -
Cone2ag0608 841 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 37 522 - -
Cone2ag0608 841 SUPERFAMILY HAD-like 566 814 IPR036412 -
Cone2ag0608 841 CDD HAD_TPP 567 808 - -
Cone2ag0608 841 Gene3D - 648 728 - -
Cone2ag0608 841 MobiDBLite consensus disorder prediction 1 35 - -
Cone2ag0608 841 Pfam Trehalose-phosphatase 569 803 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0608 Cone-Chr2:3682922 Cone5ag1644 Cone-Chr5:11621706 0 dispersed
Cone16ag0353 Cone-Chr16:5842999 Cone2ag0608 Cone-Chr2:3682922 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0608 K16055 - gmx:100810498 1248.8