Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0610 ATGGAGCTCAAGAAGGAAAAGCTTGTCAGGTTCTATTCCGAAGGAAAAAAACAACACCCCAAGGAATTACCAATTCGAAAAATACCCGAGCCACTGCAACTTGAAACGTCATCATCATCTTCATTACTCAAATCCGAATATGAACTAGTAGTACCCGAAAGAAGTATATACAGTCAAACTTTCAGAACTGGAAAGTCAACCATTTTCCCAAAGGACAATGTGCCTTGGTACAAGAGGATTCTTGATCCGAGCAGTGAAATTGTCTTGCAATGGAACTGGGTATTCATTGTCGCATGCTTAGTCGCTCTTTTTGTCGATCCCTTGTACTTTTACTTGCCAGCTTTAAAAAAGGATGTGGACTCATTTTGTGTGAAGACAGACTCTAATTTACGGATCATTGTGACATGTTTTCGGACTTTAGCGGATATTTTTTATCTGCTCCATATGGTTATAAAGTTTAGGACAGCATATATTGCGCCTAGTTCCCGTGTTTTTGGAAAGGGGGAACTTGTTATGGACCCGAAGAAGATTGCTCGGAAGTATATTAGATCAGACTTCTTCATTGATCTCGTCGCCGCTCTTCCTCTTCCTCAAATAGTTATTTGGTTAATTATACCTGCAACGAGAAGCCGTCTGATGGATCACAAGAACAATGCCCTTGCATTAATTGTTTTGTTCCAATATATTCCGAGATTATATTTGATCTTCCCGTTAAGTGCAGAGATAGTAAAAGCAACTGGATTCGTAACTAAGACTGCCTGGGCTGGGGCTGCATATAATCTCTTGCTTTTCATGTTGGCTAGCCATGTTTTGGGTGCAGCATGGTACTTGCTATCTATTGACCGGTATACCTCATGCTTGAAATCATATTGTAAAAAAGAGGAACATTACCCTATAAAATGCCTTCTTAGTTACTTGGATTGTGATACTTTGGGCGATGCTGATCACAAGCTATGGGTAAATACTACAACTGTTTTTAACAGATGTGATCCTGATATGAAAAATTTCCGGTATGGAATTTTTGAAAATGCCATGAAAAAAAATGTAGTCTCATCTAACTTCGTTAAGAAGTACTTCTATTGCTTGTGGTGGGGCTTGCAAAACTTGAGTTCATATGGACAGAATTTATCGACAAGCACTTTCATGGGAGAGACGTCATTTGCTATTTTAATTGCCATCTTGGGTCTTGTATTATTCGCCTGTTTGATTGGAAATATGCAGACATACTTGCAATCTGTTACTGTGAGGCTCGAGGAATGGAGGCTTAAGCAAAGAGACACGGAAGAGTGGATGAGACATAGACAACTCCCTGAAGATTTGAAACAGCAGGTCCGCCGTTTTGTCCAGTACAAATGGCTTGCAACTCGAGGAGTTGATGAAGAAACCATCCTCAATAGCTTACCTACTGATCTTCGCCGTGATATCCAATGCCACCTATGCCTAAATCTTGTCCGCCGAGTCCCATTCTTCTCTCAAATGGATGATCAACTCCTCGATGCAATATGCGAACGGCTAGTCTCCTCCCTGAGCACAGAAGGAACCTACATAGTCCGAGAAGGCGACCCTGTTACGGAGATGCTCTTCATCATCAGAGGCCGACTAGAGAGCTCCACAACCAATGGTGGTAGGACTGGTTTCTTCAACTCCATTACATTACGGCCCGGAGACTTTTGCGGTGAAGAGCTACTCACTTGGGCCTTGCTCCCCAAATCCACAGTCAATTTACCTTCTTCAACACGAACTGTTAGAGCCCTCAATAAGGTGGAAGCCTTTGCATTACGGGCCGAAGACCTTAAATTTGTAGCCAATCAATTTAGACGGCTACATAGCAAGAAATTGCAGCATACTTTTCGGTTTTACTCTCACCACTGGAGAACATGGGCCGCTTGCTTCATTCAGGCGGCTTGGCGTAGGCATAAGAAGAAGATGGTGGCTAAGGATTTATTGGACCGGGAAAAATCAGCTGTTGGTTCGGATTCTTCTCAACAGGTAAAGATGAATCTGGGGGTTACGATTCTTGCTTCAAGGTTTGCTGCCAACACGAGGAGAGGGGTTCAGAAGGTGAAAGATGAGATGCCTAAGTTGAGAAAGCCCGACGAGCCCAACTTCTCGGCTGAGGTTGATGATGAAGGGTAG 2136 42.88 MELKKEKLVRFYSEGKKQHPKELPIRKIPEPLQLETSSSSSLLKSEYELVVPERSIYSQTFRTGKSTIFPKDNVPWYKRILDPSSEIVLQWNWVFIVACLVALFVDPLYFYLPALKKDVDSFCVKTDSNLRIIVTCFRTLADIFYLLHMVIKFRTAYIAPSSRVFGKGELVMDPKKIARKYIRSDFFIDLVAALPLPQIVIWLIIPATRSRLMDHKNNALALIVLFQYIPRLYLIFPLSAEIVKATGFVTKTAWAGAAYNLLLFMLASHVLGAAWYLLSIDRYTSCLKSYCKKEEHYPIKCLLSYLDCDTLGDADHKLWVNTTTVFNRCDPDMKNFRYGIFENAMKKNVVSSNFVKKYFYCLWWGLQNLSSYGQNLSTSTFMGETSFAILIAILGLVLFACLIGNMQTYLQSVTVRLEEWRLKQRDTEEWMRHRQLPEDLKQQVRRFVQYKWLATRGVDEETILNSLPTDLRRDIQCHLCLNLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLTWALLPKSTVNLPSSTRTVRALNKVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKKMVAKDLLDREKSAVGSDSSQQVKMNLGVTILASRFAANTRRGVQKVKDEMPKLRKPDEPNFSAEVDDEG 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3700486 3705785 + Conep02aG0062300.1 Cone2ag0610 433077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0610 711 Gene3D Jelly Rolls 487 607 IPR014710 -
Cone2ag0610 711 MobiDBLite consensus disorder prediction 684 711 - -
Cone2ag0610 711 SMART cnmp_10 489 620 IPR000595 -
Cone2ag0610 711 MobiDBLite consensus disorder prediction 684 704 - -
Cone2ag0610 711 Pfam Ion transport protein 91 416 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0610 711 SUPERFAMILY cAMP-binding domain-like 419 611 IPR018490 -
Cone2ag0610 711 SUPERFAMILY Voltage-gated potassium channels 82 411 - -
Cone2ag0610 711 Gene3D - 87 415 - -
Cone2ag0610 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 65 688 - -
Cone2ag0610 711 FunFam Cyclic nucleotide-gated ion channel 1 487 605 - -
Cone2ag0610 711 FunFam Cyclic nucleotide-gated ion channel 1 416 480 - -
Cone2ag0610 711 CDD CAP_ED 489 620 IPR000595 -
Cone2ag0610 711 ProSiteProfiles cAMP/cGMP binding motif profile. 489 587 IPR000595 -
Cone2ag0610 711 Pfam Cyclic nucleotide-binding domain 512 601 IPR000595 -
Cone2ag0610 711 Gene3D Helix hairpin bin 417 480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1306 Cone-Chr11:9650037 Cone2ag0610 Cone-Chr2:3700486 1.18E-267 dispersed
Cone18ag0273 Cone-Chr18:1321386 Cone2ag0610 Cone-Chr2:3700486 1.25E-269 dispersed
Cone18ag1355 Cone-Chr18:9328826 Cone2ag0610 Cone-Chr2:3700486 4.93E-271 dispersed
Cone2ag0531 Cone-Chr2:2929772 Cone2ag0610 Cone-Chr2:3700486 9.17E-120 dispersed
Cone2ag0580 Cone-Chr2:3369644 Cone2ag0610 Cone-Chr2:3700486 8.74E-243 dispersed
Cone2ag0610 Cone-Chr2:3700486 Cone5ag0693 Cone-Chr5:2966404 5.96E-54 dispersed
Cone17ag1085 Cone-Chr17:8084335 Cone2ag0610 Cone-Chr2:3700486 0 transposed
Cone16ag0355 Cone-Chr16:5854955 Cone2ag0610 Cone-Chr2:3700486 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0610 K27629 - csv:101218643 1100.5