Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0611 ATGTTGATAACGGTTGGAGAAGCTGCGCTTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTCCGCTTCTTCAACCACTCGACAGTTCCACATCTCAATCGAAATATCCGTACGAGACGTAGAAACCCAATCTGCAGAGCCACCTTCTTTGTCCAACCAAAAAAATCATGGAACCTCGGCCTCAACTCCAATAGTTGTGAGGCGTCAACTTTTGATCCCTTGGGTATCAATTCAAATGCATCTTCCAGTCTAAGTTCTACTTTGGAAGCTGCAATAGAGGACAGTTCTATTGATTTTGGGGATTTTTTCAAGGATCCATTACCCGGAAAGTTCCTTAAGCTTTTGGGTTATCTGCTTCTAGCACAGATATATCCTAAGCTTCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGAAGGAAGAAGATTCTGCAGTATACTAGATATGCGTCGGTTGGGTTTGCAATTGTACTGTACACAATGGGTGCTCTCTTCTGTGACCTTATTGACACTTGGATCACATCTTTTGGTAGGACAACAGCACAGGCATTCCAGGATGGTAATTACATTGGACTTGCTGCCACAATTACCTCCTTTGTTCTGTTGGTCCTCAGTATTGTATATGTTCAGGAAGCAGAAAAGAAAATTCCAATTAACTATGCCTCAAGATATGCTAGCAGAAGTGGAGGGCCTCAGAAATCTGATTACTTACCGTTTAAGGTGAACAGTTCTGTAGTTATGCCTATCATATTTTCAACATCAACACGCTTCATGGGCATAGCTGCTTTGAAGAAAGCAGCACTTGCTTTAAATCCAGGCGGATCTCTTTATCTACCCACCAACATCCTTTTAATTGCGTTCTTCAACTACTACTACACTTTCCTCCAGTTGGACTCAGACGATGTAAGTGAACAATTGAAGCGCCAAGGTGCATCTATTCCACTTGTCCGCCCTGGAAAAAGTACTGCCACCTTTATCAAGACGGTACTAAGTCGAATATCAGTTCTTGGTTCAGGCTTCTTAGCAATCCTTGTTGTGGGTCCTACGGTGATTAAGCAAACTACGCACCTGACTGCCTTCCGAGGATTTTCTGGGACATCTGTTCTTATTCTAGTTGATTGTGCTACAGACACAGCAAGAAAAGTATAA 1155 42.51 MLITVGEAALAASSSSSSSSSSSLRFFNHSTVPHLNRNIRTRRRNPICRATFFVQPKKSWNLGLNSNSCEASTFDPLGINSNASSSLSSTLEAAIEDSSIDFGDFFKDPLPGKFLKLLGYLLLAQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVLYTMGALFCDLIDTWITSFGRTTAQAFQDGNYIGLAATITSFVLLVLSIVYVQEAEKKIPINYASRYASRSGGPQKSDYLPFKVNSSVVMPIIFSTSTRFMGIAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDSDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSGFLAILVVGPTVIKQTTHLTAFRGFSGTSVLILVDCATDTARKV 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3709325 3713351 - Conep02aG0062500.1 Cone2ag0611 433078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0611 384 SUPERFAMILY Preprotein translocase SecY subunit 122 383 IPR023201 -
Cone2ag0611 384 Gene3D SecY subunit domain 165 384 IPR023201 -
Cone2ag0611 384 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 182 374 IPR002208 GO:0005048(PANTHER)|GO:0006616(PANTHER)|GO:0008320(PANTHER)|GO:0009535(PANTHER)|GO:0015031(InterPro)|GO:0016020(InterPro)
Cone2ag0611 384 Pfam SecY 167 380 IPR002208 GO:0015031(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0356 Cone-Chr16:5860872 Cone2ag0611 Cone-Chr2:3709325 3.50E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0611 K10956 - csv:101222431 393.66