Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0623 ATGCATACTAGGTATATGGAGAGGACAAACTCTATGACGGGGAAAAGGAGCTCGGAGGGTGGAGAAGAGGAGCAACCAGAGCGGAAGCGCCCCGCCCTCGCTAGTGTAATTGTAGAAGCTCTAAAGGTGGATAGTCTACAGAAGCTCGGATCGTCTCTGGAACCCATTCTTCGTAGAGTGGTGAGTGAAGAAGTTGAACGTGCTTTGGCAAAGTTAGGCCCTGCTAGACTCAATGGAAGGTCTTCTCCAAAACGACTTGAGGGTCCTGATGGAAGAAGCCTTCAGCTGCATTTCAGGTCCAGACTCAGCCTTCCAATTTTCACAGGAGGAAAAGTGGAGGGTGAGCAGGGTGCTGCAATTCATGTTGTACTGCTTGATGCCAACTCTCGTCGTGTTGTAACTTCTGGACTTGAAGCTGCAGTGAAACTAGATATTATTGTTCTTGAAGGTGATTTTAATAATGAAGATGATGAAGATTGGACGCTAGAAGAATTTGAAACCCATGTGGTAAAAGAGCGTGAAGGAAAAAGACCTTTGTTGACTGGTGATCTTCAGGTTACTCTAAAGGAAGGAGTAGGTACACTGGGTGAGCTCACTTTCACAGATAATTCAAGTTGGATAAGGAGTAGGAAATTTAGACTTGGTTTGAAGGTTGCCTCGGGGTTTTGTGAAGGAATTCGCATACGTGAAGCAAAGACTGAAGCATTTACCGTGAAAGATCATAGAGGAGAATTGTACAAGAAACATTATCCTCCATCGCTAAATGATGAAGTATGGAGACTGGAAAAGATTGGAAAGGATGGGGCATTTCATAAGAGGCTAAATAATAATCAAATATACTCAGTTGAAGACTTCCTTCGGCTTGTGGTCCGAGATTTACAAAAGTTACGAACAATTCTTGGAAGTGGTATGTCAAACAGGATGTGGGATTCTCTCATTGAGCATGCAAAGACATGTGTCCTGAGTGGGAAGCTTTATATTTATTATCCTGATGATTCAAAAAACGTTGGAGTTGTTTTCAACAATATCTTTGAACTAAATGGCCTTATTGCAGTGGAGCAGTATTTTTCTGCTGATTCTCTTTCTGACAGCCAAAAGGTTTATGTGGATTCGTTGGTGAAGAAAGCTTACGATAATTGGGATGAAGTTATAGAGTATGATGGCAAGTCACTTTTGGGTTTCAAGCAAACCAATAAGTCAAGTACGTCGAGAAATGACTTTGATGTGGGCAACCTTGATATCCCACGAGCCTTGGATACTGACGTCTCAATGTCACACCTGCCTATTTCAGTAACTGAGCACCCTTTAGTTGATAATGGCCTACCACTTGGAGGATATAATAATAATATGGCAACAAGATATCCAACCCAATCACAGATTGTCAATACAAACTCCCGTGCTCGGATTGATAACAACACCTCATTTGCGCCTCAAGAGTTGTTTCCCAACAATGCTCATCAAGCCCATGGTCCAAGAATCGATAATAGTTCTGTGGGTTTAGCCCTTGGTCCTCCTCAACCATCTATATCCCCTTTCCAGGATATCGGCTCTTCTATGCAGCAATCCAACATGAACCCATTTGATGATTGGTCCCATAGCCGGGAAAAGGGAGTAGAGGACTTCTTCTCAGAGGAAGACATCCGCGTTAGAAGCCATGAAATGCTTGAGAATGAAGATATGCAGCATTTGCTTAGAATGTTTAGCATGGGAGGCCATACCTCTGTTAATGGGCCTGAGGATGGGTTTTCTTTCCCTGCATTCATGCCTTCTCCTATGCCTAATTTTGATGAGGATCGTGGCCGTTCTGGAAAAGCCGTTGTTGGCTGGTTGAAGATTAAAGCTGCAATGAGGTGGGGCTTTTTTGTACGGAAGAAAGCTGCTGAAAGGCGGGCCCAGATTGTGGAGTTGGACGATGAATAA 1920 43.49 MHTRYMERTNSMTGKRSSEGGEEEQPERKRPALASVIVEALKVDSLQKLGSSLEPILRRVVSEEVERALAKLGPARLNGRSSPKRLEGPDGRSLQLHFRSRLSLPIFTGGKVEGEQGAAIHVVLLDANSRRVVTSGLEAAVKLDIIVLEGDFNNEDDEDWTLEEFETHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCEGIRIREAKTEAFTVKDHRGELYKKHYPPSLNDEVWRLEKIGKDGAFHKRLNNNQIYSVEDFLRLVVRDLQKLRTILGSGMSNRMWDSLIEHAKTCVLSGKLYIYYPDDSKNVGVVFNNIFELNGLIAVEQYFSADSLSDSQKVYVDSLVKKAYDNWDEVIEYDGKSLLGFKQTNKSSTSRNDFDVGNLDIPRALDTDVSMSHLPISVTEHPLVDNGLPLGGYNNNMATRYPTQSQIVNTNSRARIDNNTSFAPQELFPNNAHQAHGPRIDNSSVGLALGPPQPSISPFQDIGSSMQQSNMNPFDDWSHSREKGVEDFFSEEDIRVRSHEMLENEDMQHLLRMFSMGGHTSVNGPEDGFSFPAFMPSPMPNFDEDRGRSGKAVVGWLKIKAAMRWGFFVRKKAAERRAQIVELDDE 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3944448 3949841 - Conep02aG0063700.1 Cone2ag0623 433090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0623 639 MobiDBLite consensus disorder prediction 1 31 - -
Cone2ag0623 639 Pfam Calmodulin binding protein central domain 254 319 IPR046830 -
Cone2ag0623 639 MobiDBLite consensus disorder prediction 484 531 - -
Cone2ag0623 639 PANTHER OS02G0177800 PROTEIN 16 630 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone2ag0623 639 MobiDBLite consensus disorder prediction 1 16 - -
Cone2ag0623 639 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cone2ag0623 639 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cone2ag0623 639 MobiDBLite consensus disorder prediction 510 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0548 Cone-Chr2:3074639 Cone2ag0623 Cone-Chr2:3944448 3.43E-193 dispersed
Cone2ag0623 Cone-Chr2:3944448 Cone6ag1054 Cone-Chr6:6149450 9.94E-283 dispersed
Cone16ag0372 Cone-Chr16:6107067 Cone2ag0623 Cone-Chr2:3944448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0623 - - - 0.0