Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0627 ATGAGTGATTGGAATTGTTATCAAGGAATTTCATGCTTGAGACAGTGTGAGATTCCAATTGAGCAGCAGCAATACGGGATGGATAGCCCTTCCACAATCCCAATTTCTGCCCCTAATTTCTCGCCAGGTTCAATTGATGAGAACCCTAGGGTCAAATTTCTTTGTAGTTTTTTAGGGAGTGTAATGCCTCGCCCACAAGATGGGAAACTTAGGTATGTAGGTGGAGAGACGAGGATAGTGAGCATGCCTCGAGATGTTACGTATGAGGAGTTGATGAGTAAAATGAGAGAGCTATATGAAGATGCTGCTGTGTTGAAGTACCAGCAACCTGATGAGGATATTGATGCTCTTGTCTCAGTTGTGAACAATGATGATGTGATTAACATGATGGAAGAGTATGATAAGTTGGGTTCCAGTGAGGGATTCACCAGGCTAAGAATATTCTTGTTTCCTCATCCTGATTATGATGGTTCTTCTGTCTTTGTTGAAGGGGATGAGAGGGAATCCGAGAGGAGATATGTTGATGCTCTTAATAATTTAAACGATGTTGCGGATTTTAGAAGACAACTAATTGATTCGTCTGTCATTAGCCATATCGATGATATTCATGGGATGGACCAGTTCTGTAATCCAGTAAGTCCTTGTGGAAGTCTTCCAAGAAGTTCTGAGCTTTTTCCACAGTATAATCTGAGACACCTTAAGATTCCTCATGTGGGTCTGGGACAAAACCAACAATCTGTTTCTCAGAGGTACAATGAAATGGAAGCTCCATCGAGTCCAGTTTACTATTCTCCAAGGCATCATGGGCATACTGATTCAAGACTGGTGGGAGAATATCCATCTTCTCCTGGATGGTACCGTATGCAATTTCCTGATAAGTATTTTGATAGAGTGCCTGAAGAATATGCTCGCCAACAACTGAATCACCAGCCTACATGCGAGCACCAACCACAATTTGCTGAGAATGTTGTCTGTTATCCAAGTGGAGTTATTACCGATGAAAAGTCGGGCTTCCCTGGTAACATTCTTCATAGACAAAATGTTATGGATGGGATTCATGGGAATAGTGTCTGTGAGCATTGTAGGATGAATTTCCATCGAAACCAACCTTATACAGAGCATGCCAGCATGATGAATGGACTCCCGCAAGTCCATAATCTATGTGGTGAGTGCCTTCCTTATAGGGAGGCTTCCATGATCAATTCAGATGCGAAGTTGCATCATGGGATTTTCCCCAGTGAGCATAATAACGATCACCGATCTGTCTTAAATTTCCCTAGTGGGACGAATGTCTATCATGGTTCTCCGAATTTTCATCAGCAAACTGGTCCAGAATTGGGGAATGAAGTATTTCATGACCAAGGTGTGCCTGCTATGCCACACGTACAAACACCTCCCCATGATGAAAGAGGAGTTTTGTATGGAAATTTGCCTTACGCTTATGATAGCCATTATCCTCCAGTATCACATGGACATGTACCTAGTACTGCTTTTAGGCAGAATATTCAGAATCCAATACATGTTCCTCCCCCCTATGACGTTTCAAATCCTCATCAGGAAGTGAATGGTACTGTTAATATTGGATATGTAAGGGGCCCACAAGAGGGTAGTCCAAGATTTTGTATTCATCCGGACAGTCAAAGTACTTGGGTCGATCCCTCACAAAGAATATTGGGTTTAGATGGAGCAACTACTCCAGAATATTCATACGGGCATGCTTCAAAAATGAACCCAGACACTCTTGGCCAGGAAAAGCAATATTTGCTTACTCAGGGCCATATTCAACCCCCACCTGAGAGGCAGAACTTCGCCAGTCCAGGACCCTTGATGATTCCAAGTCCCTCTTCTTTGACGATTGATGGTAGATTGGTTTCTTCTGTCCATCCTGTCCAAAATCCCCTGTCAGAAACTGACAGCAATGTTACTAAAATGCTGCTGTTCAAAAGTGAGAATATGGTTGTCGAAGGAAAGGAGGCAGGTCATGTGGAGAAGGCTGATACCTCTAATGTCCAAGCTGTCTCTCTTCCAGAAGAAAACCAACTTGCTTATAGTAATTCTGAGGTGGCGCCTCCTAAATCTTTTAATCGTAACTGCTTAAACTCTCCAGTAGAAAATGGCGGTGTTCTCTCACCGGCTGAAAATCTTTGTGCTCCTGCTGAGGAATCAAAACTATCTTCCAATCGATTGAGTTTACTCCCTCAGTTGATTGCTTCTGTGAAGAGAGCAGCATTAGAAGACTCTGAGGACATGAAAGGTGTGGTTGAAGAAATTACTCTTGAGGAGCCTGTTACAATAGTCAAGGAAGAAACCAAAAATGAAATAGTATCAGTGAATGCTCAGGAGGAATCAGAGTTGGAAATAGATGATGATCATTTAAAACCTTCCAAAATTGAGCCAACAAAGGCTGAGGAAGAGGCTATTTCTAGGGGATTACAGACAATAAAAAACGATGATCTGGAGGAGATCCGAGAGCTGGGATCTGGGACATATGGAGCTGTTTATCACGGGAAATGGAAGGGCTCTGATGTAGCGATAAAAAGAATTAAAGCAAGCTGTTTCTCAGGGCGGCCATCAGAAAGAGAACGTTTGATTGCGGATTTCTGGAAGGAAGCTTTGATATTAAGTTCTTTGCACCATCCAAATGTTGTTTCTTTCTATGGTATTGTCCGCGATGGTCCTGATGGATCCTTAGCAACTGTGACTGAGTTCATGGTAAATGGATCCTTGAAACAGTTCTTGAGAAAAAAGGACAGAACAATTGACCGTCGTAAGAGACTCATCATAGCTATGGATGCTGCATTTGGGATGGAGTATTTACATGGAAAGAACATCGTACATTTTGATTTGAAATGCGAAAATCTTTTAGTCAATATGAGAGACCCGCAAAGACCTGTTTGCAAGATTGGTGATTTGGGGTTATCAAAGGTTAGGCAGCACACCTTAGTGTCGGGTGGTGTTCGTGGAACTTTACCTTGGATGGCACCTGAGCTTCTTAGTGGGAAAAGTAACATGGTAACTGAGAAGATTGATGTCTACTCATTTGGAATTGTTATGTGGGAAGTTCTCACCGGTGATGAACCTTATGCGGATATGCATTGTGCTTCTATAATTGGAGGAATAGTGAACAACACATTACGTCCGAGAACTCCAACATGGTGCGATCCTGAATGGAAGGCTTTGATGGAAAGTTGTTGGGACTCTGATCCTGCAAAGAGACCATCTTTTGCAGAAATTTCTCAGAAGCTAAGGAACATGGCTAGTGCAATGAATCTGAAATAA 3279 42.39 MSDWNCYQGISCLRQCEIPIEQQQYGMDSPSTIPISAPNFSPGSIDENPRVKFLCSFLGSVMPRPQDGKLRYVGGETRIVSMPRDVTYEELMSKMRELYEDAAVLKYQQPDEDIDALVSVVNNDDVINMMEEYDKLGSSEGFTRLRIFLFPHPDYDGSSVFVEGDERESERRYVDALNNLNDVADFRRQLIDSSVISHIDDIHGMDQFCNPVSPCGSLPRSSELFPQYNLRHLKIPHVGLGQNQQSVSQRYNEMEAPSSPVYYSPRHHGHTDSRLVGEYPSSPGWYRMQFPDKYFDRVPEEYARQQLNHQPTCEHQPQFAENVVCYPSGVITDEKSGFPGNILHRQNVMDGIHGNSVCEHCRMNFHRNQPYTEHASMMNGLPQVHNLCGECLPYREASMINSDAKLHHGIFPSEHNNDHRSVLNFPSGTNVYHGSPNFHQQTGPELGNEVFHDQGVPAMPHVQTPPHDERGVLYGNLPYAYDSHYPPVSHGHVPSTAFRQNIQNPIHVPPPYDVSNPHQEVNGTVNIGYVRGPQEGSPRFCIHPDSQSTWVDPSQRILGLDGATTPEYSYGHASKMNPDTLGQEKQYLLTQGHIQPPPERQNFASPGPLMIPSPSSLTIDGRLVSSVHPVQNPLSETDSNVTKMLLFKSENMVVEGKEAGHVEKADTSNVQAVSLPEENQLAYSNSEVAPPKSFNRNCLNSPVENGGVLSPAENLCAPAEESKLSSNRLSLLPQLIASVKRAALEDSEDMKGVVEEITLEEPVTIVKEETKNEIVSVNAQEESELEIDDDHLKPSKIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFSGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLRKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNNTLRPRTPTWCDPEWKALMESCWDSDPAKRPSFAEISQKLRNMASAMNLK 1092
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3992967 3999230 + Conep02aG0064100.1 Cone2ag0627 433094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0627 1092 PANTHER SERINE-THREONINE PROTEIN KINASE 43 1086 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone2ag0627 1092 Pfam PB1 domain 66 151 IPR000270 GO:0005515(InterPro)
Cone2ag0627 1092 CDD STKc_MAP3K-like 825 1082 - -
Cone2ag0627 1092 CDD PB1_UP2 54 150 - -
Cone2ag0627 1092 PRINTS Tyrosine kinase catalytic domain signature 938 956 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 PRINTS Tyrosine kinase catalytic domain signature 1009 1031 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 PRINTS Tyrosine kinase catalytic domain signature 901 914 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 PRINTS Tyrosine kinase catalytic domain signature 1053 1075 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 Gene3D - 69 151 - -
Cone2ag0627 1092 SMART serkin_6 819 1086 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 ProSiteProfiles Protein kinase domain profile. 819 1085 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 Pfam Protein tyrosine and serine/threonine kinase 821 1082 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 Gene3D Transferase(Phosphotransferase) domain 1 906 1091 - -
Cone2ag0627 1092 Gene3D Phosphorylase Kinase; domain 1 805 905 - -
Cone2ag0627 1092 SUPERFAMILY Protein kinase-like (PK-like) 807 1080 IPR011009 -
Cone2ag0627 1092 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 70 152 - -
Cone2ag0627 1092 SMART PB1_new 65 150 IPR000270 GO:0005515(InterPro)
Cone2ag0627 1092 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 812 906 - -
Cone2ag0627 1092 ProSitePatterns Protein kinases ATP-binding region signature. 825 846 IPR017441 GO:0005524(InterPro)
Cone2ag0627 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 944 956 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0627 1092 SUPERFAMILY CAD & PB1 domains 67 158 - -
Cone2ag0627 1092 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 907 1092 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1310 Cone-Chr18:9105690 Cone2ag0627 Cone-Chr2:3992967 1.17E-92 dispersed
Cone2ag0627 Cone-Chr2:3992967 Cone3ag1498 Cone-Chr3:33573742 8.84E-159 dispersed
Cone18ag1309 Cone-Chr18:9104996 Cone2ag0627 Cone-Chr2:3992967 1.46E-38 transposed
Cone16ag0368 Cone-Chr16:6068296 Cone2ag0627 Cone-Chr2:3992967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82614 PF12819 Malectin_like 7.50E-32 CL0202 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0627 - - - 0.0