Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0646 ATGGCGAAGCCTCGTAAGCCAAAGAACATCGACGATATGAAACCAGATAGCTCTGGTGCTCTAGTTCGTCACCAGAAGCTTTGCCTCTCCATCGACATAGACAAACATCAAATATACGGGTACACAGAGTTGGAGATTATGGTACCAGAAATCGGTATTGTTGGGTTGCACGCCGAGGATTTACGGATCGAGAGTGTCACTGTCGATGGCGAGACGACGGAATTCGAGTATTATCCCCGACCTCAATATATGGAGAATGAGAGGAGGTGGAATGCTGTGGTGTCGCCGACCTCTGCTGCGGACGCTGGTAGCTCTATTTACTTGTCGTCTTTAGAAAGAGAATTGATTCCAAATTTACTGATAAATTGCTGCAAAACCTTCAAGAATGGAAACGAACAGCAAGAGCAGGTGGTCTTTGAAAATGGGGGCCAGCCCTCGTACGATGCCAACCAGAATGTAAGGCTGATTCGGATTGATTATTTGGTAGAGAAAGCAGAGACGGGTATACACTTCAATAGTCATATGGTACACACCAATAATCAGATAAGGCGCGCCCGATGCTGGTTCCCCTGTATAGATGATAGTTTACAGAGATGCTGCTACGACTTGGAGTTTACTGTTGCCCGTGATCTCGTGGCTGTCAGTACTGGAACCTTGCTATACCAGGCTTTGACTGAGGAAGATCTACCTCGTAGAACTTATGTCTATCGATTAGATACTCCTGTTAATGCGCAGTGGGTATCTCTTGCAGTAGCACCATTTGAAATACTTCCTGACCACCAAACTGGTGTCATATCACATATGTGTTTGCCAGCAAATTTCTCCAAGCTTCGGAATACAGTGGACTTTTTTCACACTGTATTCAGCTGTTTTAGGGACTATCTTTCATTGGATTTTCCATTTGGGTCATACAATCAAGTTTTCATAGATCCTGAGATGGCAGTATCTTCATCAAGTTTGGGAGCATCCATGTGCATCTTTAGTTCTCATGTTTTGTTTGATGAGAATATAATTGACCAGACCATAAACACGAGAATCAAACTTGCTTATGCTCTTGCACGGCAGTGGTTTGGAATATATATCACACCCGAGTCGTCAAACGATGATTGGCTGTTGGAAGGTCTTGCTGGTTTTCTGGTAGATTTATTTATCAAGAAGCACTTGGGAAATAATGAGGCACGATACCGAAGATACAAGGCAAACTCTACTGTGTGCAAAGCTGATGATAGTGGGGCAACCTCCTTAAGCTCCTCAGCGTCTTGTAAGGATTTGTATGGTACTCAATGCATTGGCATATATGGAAAAATAAGATCATGGAAATCTGTGGCGGTCCTTCAAATGTTGGAAAAGCAGATGGGGCCCGAGTCATTCCGTAAAATTTTGCAGACTATTGTTAGTCGTCCCAAAGATTCAACTCATTCTTTTAGATCACTTAGCACTAAAGAGTTTCGGCATCTTGCTAATAAGGTTGGAAATCTTGAGCGCCCATTTCTTAAAGAGTTCTTTCCCCGGTGGGTGGGATTGTGTGGGTGTCCAGTGCTGAGTATGGGATTTTCGTATAACAAACGGAAGAACATGGTTGAATTGGCGGTGCTACGGCGATGCACTGCTATGTCGGATGAAAATGCATTAGCTGCAATTCCAGGCTCTGAAAACCATGATGGTGATGCTGGATGGCCTGGAATGATGAGTATTAGGGTCTATGAACTAGATGGTGTGTTTGATCATCCAGTTCTGCCGTTGACTGGAGAATCTTGGCAACTGTTGGAAATACAATGCCATTCAAAACTTGCTGCGAAACGCCTCCAGAAGACTAAAAGAGGCTCAAAACCTGATGGGTCTGATGATAATGGCGATACACCTGCACTAGATGTGCGCTCCAGTATGGAGTCCCCTTTGTTGTGGTTGAGAGCAGACCCTGAGATGGAGTATCTTGCTGAAATTCATTTTAATCAACCTGTTCAGATGTGGATTAATCAATTAGAGAAAGACAAAGATGTCATTGCTCAAGCACAAGCAATTGCAATGCTGGAGACATTACCACAACTATCATTTTCTGGTGTTAATGCTTTGAATAACTTCCTCACAGACTCTAAGGTCTATTGGAGAGTTCGAATAGATGCTGCATTTGCATTGGGTAAGACAGCATCTGAGGACATGGATTGGGCTGGTTTACTCAATTTGGTAAAATTTTATAAGAGTCGGAGGTTTGATGCAAACATTGGACTCCCAAAGCCGAATGACTTTCATGAATTTTCCGAGTACTTTGTTCTTGAGGCCATTCCACATGCTGTGGCTGCTGTTAGAACTGGTGATGAGAAGAGCCCAAGGGAGGCTGTGGAATTCATTTTGCAGCTTTTGAAGTACAATGACAACAGTGGGAATCCTTACTCTGATGTGTTCTGGCTGGCTGCATTGGTCCAGTCGATCGGCAAACTTGAGTTCGGACAACAGAGTATTCTATTATTACCATCTCTCCTCAAGCGCATCGATAGGCTCTTGCAATTTGACAGACTGATGCCCAGCTACAACGGGATCTTGACAATCAGCTGTCTTCGAACCTTGACCCAGATTGCGTCGAAACTATCAGGATTCTTGCCTCCCGATCGTGTTTTCGAACTTATAATAGCTTCTAGAAATTCCAAAACAATGTGGCAAGTTCGATTAGAAGCAAGCAGAGCGCTCCTTGATCTTGAATTTCACTTCAAGGGCATTGATGCAGCGATCTGGCTGTTTATCAAATATTTAGAAGAAGAGCAATCTATGAGAGGGCAGGTGAAACTGGGTTTGCATACTATGCGGTTATGCTTGATAATAGATGGATCTGGTTGTAATAATTTCGTTAAGAATGACACTCTTGTGGCTTTGCTTCGACTACTTGAAGGGGATATAGCATTCAACAATGTCTGTCTTCGTCACTACTTATTCTGCATCTTGCAAGTCCTTGCAGGAAGGCGCTCTACACTTTACGGAGTTCCCAGAGATCATAGAAATTTGCATGTGGGTGATGGAGACATGGGCAATGAACAGAAGAACATTTTTTCCGCTCCCATTTCTCAAACCAACCCACCTGACCCATCTCTGGCACCTCCTATGCTGCAAGATTCCCATGGAAACCTTCTGCCTGAGAAGTTGGTAGTTCCAGAAGCTTTTAAGGAAGCACTAGAAATTCCAGAAGCATCCAAGGAAGCATCATCAATTCCAGAAGCATCCAATGAGGCATTGAAGATTCTGGAAGAAATATCCAATGTTATTCCAGAAACTTCCAAGGAGGCATTGGCAGTTCCAGAAACTTCCAAGGAGGCATTGGCAGTTCCAGAAACTTCCAAGGAGGCATTGGCAGTTCCAGAAACTTCCAAGGAGGCATTGGCAATTCCAGAAACCTCCGAAGTGGCATTTTCCATTCCAGAAGCCACCAAGGAAGCATCGGCCAGTCTGGAAGTTTCCAAGGAAGCAGATGCTGTTTCCAACAGCCACGAAAGGAAGAAGTCTGTGGTCAAGATTAAAGTTAGAAAATCTGCTCGTGTTACGACTACTACCAGTAATAAACTAGAGGGTGATCAAACCATTGAAATATCTCATGGGAGTCACCATGACCATGGAGGAGGACTCAGCAGCTCCGTCTCGGTCGATGCCCCGCCACAAAGGAATTTCACAGAGAATGTATGTGCTCGCACCCAAAACCTCGAGGAAGTCAACTCCTTTCATGATCATGTTGGGTCCCATTTGACTGCTAGCATCGGCAGTGCAAAGCTGACAAGTGAGGAAGGGCTTGTAAAGGAACTACAATGCACTGCTGATTCTGGTCGAGCTTCTTCCCTACCACTCTGTCCTCATCCAGATGATCCTTTGTCATCAAGCATTGTCCAAGAAAACAATGTTGATGTGGATGCCCAGAAATTTGCTAGTCTTCTGATGCTTTCTTCTGGGAAACAAAATCTTGATAGTTGTATGGAAGCTGTGGATTCTCCTATACAAGGAAAAGACAAGAAGAAGAAGAAAGACAGAGAAAAGAAGCGCAAGCGTGAGGAGAATAAAGAGCACTGCAATGATCCTGCGTATTTGGAGAGAAAACGAAGGAAGAAGGAGAAAAAGAAGAATGAAAAAGAGATTGCGAAGCTAGTGGAGCAAGCAAAACCGTCCACAGTAGATAGGGCTCAGAAGGAAATTGCAATACAGCCGGCTTCGATTGAGCGAAAACCAAATGAACAAAGTGGATCTAAATTAGTGACACTGGCTGATACTCGGCCCCAAGCTTCCGAGGGTACTTCTGCTACTATGAAATTTCGGTTTAGGATAAAGAATCTGCCACTTAACAAGCCAAGCTAG 4329 44.03 MAKPRKPKNIDDMKPDSSGALVRHQKLCLSIDIDKHQIYGYTELEIMVPEIGIVGLHAEDLRIESVTVDGETTEFEYYPRPQYMENERRWNAVVSPTSAADAGSSIYLSSLERELIPNLLINCCKTFKNGNEQQEQVVFENGGQPSYDANQNVRLIRIDYLVEKAETGIHFNSHMVHTNNQIRRARCWFPCIDDSLQRCCYDLEFTVARDLVAVSTGTLLYQALTEEDLPRRTYVYRLDTPVNAQWVSLAVAPFEILPDHQTGVISHMCLPANFSKLRNTVDFFHTVFSCFRDYLSLDFPFGSYNQVFIDPEMAVSSSSLGASMCIFSSHVLFDENIIDQTINTRIKLAYALARQWFGIYITPESSNDDWLLEGLAGFLVDLFIKKHLGNNEARYRRYKANSTVCKADDSGATSLSSSASCKDLYGTQCIGIYGKIRSWKSVAVLQMLEKQMGPESFRKILQTIVSRPKDSTHSFRSLSTKEFRHLANKVGNLERPFLKEFFPRWVGLCGCPVLSMGFSYNKRKNMVELAVLRRCTAMSDENALAAIPGSENHDGDAGWPGMMSIRVYELDGVFDHPVLPLTGESWQLLEIQCHSKLAAKRLQKTKRGSKPDGSDDNGDTPALDVRSSMESPLLWLRADPEMEYLAEIHFNQPVQMWINQLEKDKDVIAQAQAIAMLETLPQLSFSGVNALNNFLTDSKVYWRVRIDAAFALGKTASEDMDWAGLLNLVKFYKSRRFDANIGLPKPNDFHEFSEYFVLEAIPHAVAAVRTGDEKSPREAVEFILQLLKYNDNSGNPYSDVFWLAALVQSIGKLEFGQQSILLLPSLLKRIDRLLQFDRLMPSYNGILTISCLRTLTQIASKLSGFLPPDRVFELIIASRNSKTMWQVRLEASRALLDLEFHFKGIDAAIWLFIKYLEEEQSMRGQVKLGLHTMRLCLIIDGSGCNNFVKNDTLVALLRLLEGDIAFNNVCLRHYLFCILQVLAGRRSTLYGVPRDHRNLHVGDGDMGNEQKNIFSAPISQTNPPDPSLAPPMLQDSHGNLLPEKLVVPEAFKEALEIPEASKEASSIPEASNEALKILEEISNVIPETSKEALAVPETSKEALAVPETSKEALAVPETSKEALAIPETSEVAFSIPEATKEASASLEVSKEADAVSNSHERKKSVVKIKVRKSARVTTTTSNKLEGDQTIEISHGSHHDHGGGLSSSVSVDAPPQRNFTENVCARTQNLEEVNSFHDHVGSHLTASIGSAKLTSEEGLVKELQCTADSGRASSLPLCPHPDDPLSSSIVQENNVDVDAQKFASLLMLSSGKQNLDSCMEAVDSPIQGKDKKKKKDREKKRKREENKEHCNDPAYLERKRRKKEKKKNEKEIAKLVEQAKPSTVDRAQKEIAIQPASIERKPNEQSGSKLVTLADTRPQASEGTSATMKFRFRIKNLPLNKPS 1442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31145654 31191240 - Conep02aG0165700.1 Cone2ag0646 433113

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1173 1189 - -
Cone2ag0646 1442 Gene3D Neutral Protease Domain 2 259 508 IPR027268 -
Cone2ag0646 1442 SUPERFAMILY ARM repeat 442 985 IPR016024 -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1147 1214 - -
Cone2ag0646 1442 Pfam Peptidase family M1 domain 285 490 IPR014782 GO:0008237(InterPro)|GO:0008270(InterPro)
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 602 625 - -
Cone2ag0646 1442 Coils Coil 1355 1377 - -
Cone2ag0646 1442 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 252 IPR042097 -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1200 1214 - -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1320 1369 - -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1398 1425 - -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1392 1425 - -
Cone2ag0646 1442 CDD M1_like_TAF2 24 506 - -
Cone2ag0646 1442 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 266 515 - -
Cone2ag0646 1442 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1382 IPR037813 GO:0000976(PANTHER)|GO:0003682(PANTHER)|GO:0005669(InterPro)|GO:0005669(PANTHER)|GO:0006367(PANTHER)|GO:0016251(PANTHER)
Cone2ag0646 1442 FunFam Transcription initiation factor TFIID subunit 259 510 - -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 1340 1358 - -
Cone2ag0646 1442 Gene3D tricorn interacting facor f3 domain 20 251 IPR042097 -
Cone2ag0646 1442 MobiDBLite consensus disorder prediction 605 619 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0646 K03128 - - mdm:103437964 1766.51
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g367 . . . . . . . . Cmo13g01082 . . . . . . Cpe20g00107 . . . . . . . . . . . . . . . Cone2ag0646 . . . Lsi02g00164 Csa01g00648 Chy12g01454 Cme12g01894 . . . Bda14g00912 . Bpe15g00546 Bma03g00887 . . . . Cma13g01041 . Car13g00873 . . . Bhi08g01209 . . Lac10g0216 . . . Cla04g01110 Cam04g1162 Cec01g1673 Cco01g1719 Clacu04g1190 Cmu04g1170 Cre01g1467 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010321 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32