Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0665 ATGAGTAATTTGAAGGAATCGCCGTACCGGAGGCGGCGAGATTTGGAGGCCGGAAGGACAGAGGAAGAGGAATCGTCGTCGGGTCCTTTCGATATTACCAGAACAAAGAATGCTTCGGTCGAGCGTCTCAGACGCTGGAGACAAGCCGCACTCGTGCTTAATGCTTCTCGACGATTTCGTTATACGTTAGACTTGAAAAAGGAGGAAGAGAAGAAAGAAGCAATAATGAAGATCAGATCTCATGCCCAAGTCATAAGGGCTGCACATCGCTTCATAGAACTCGGGGTTAACTCGAACGGAACTACGGCACCAGTGATTTCCGATGGTGAATCTAATGTACAGGAGCAACTGGCGTCGCTTATGAAAAAACATAATTTATCAGCTCTGGAGCGATATGGAGGGGTTAAAGGGCTCGCTGATATGTTACAAACCAATATAGAGAAGGGGATTAGTGGAGATGATACTGATTTACAGAAACGGAAAGATATGTATGGATCAAATACCTATCCTCAGAAAAAAGGAAGGAGCTTTTGGAGGTTTCTTTGGGAAGCTTGGCAAGATCTCACATTGATTATATTGATGATAGCTGCAGTGGCTTCTTTAGCGCTGGGCATAAAAACTGAGGGTATCAAGGAAGGTTGGTATGATGGTGGAAGCATTGCCTTTGCAGTTATTCTTGTAATTGTTGTTACAGCAATTAGCGATTACAGGCAATCTCTTCAGTTCCAGAATTTAAATGATGAAAAGAGAAACATACATCTGGAGGTCACTAGGGGTGGTAGAAGAGTTGATGTTTCTATATATGACATTGTTGTCGGTGATGTTGTGCCCCTCAACATCGGTGATCAGGTTCCTGCCGATGGTATCTTAATTTCTGGTCACTCTCTTGCAATTGATGAGTCAAGCATGACGGGAGAGAGCAAGATTGTTAATAAAAATGCAAAAGAACCTTTTCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACTATGTTGGTTACATGTGTTGGGATAAATACTGAATGGGGAATGCTTATGGCTAGTATTTCAGAAGACACTGGTGAGGAAACACCTTTGCAGGTGCGTCTCAATGGCGTTGCAACTTGTATTGGTATTGTTGGGCTTACTGTTGCTTTTGTTGTCTTGGTTGTCCTCATAGTCAGGTACTTCACTGGCCACACAACAAATGAAGAAACTTCTCAGTTTATTGCAGGGAAAACAAAGGTTGGCAAAGCCATTGATGGAGTTATTAAGATCATTACTATTGCGGTAACCATTGTAGTAGTTGCAGTACCTGAAGGTCTACCATTAGCTGTCACCTTAACTCTTGCATACTCAATGAGAAAGATGATGGCGGATAAGGCGTTGGTTCGAAGACTTTCTGCATGTGAGACAATGGGTTCTGCAACAACTATTTGTAGCGACAAGACTGGAACATTAACGTTGAACCAGATGACCATCGTTGAGGTATATGCCGGTGGAAAGAAGGTTGAACCTCCAGAGAACAAGTCAGAGCTCTCTCAAATGCTTTCCTCTCTACTCATTGAAGGAATTGCGAATAATACAAATGGAAGTGTTTATATGGCTGAGGGAGGTGGAGATGTTGAGGTTTCTGGTTCACCGACGGAAAAAGCTATCCTCTCTTGGGGGCTTAAGCTGGGGATGAATTTTGAAACTGACCGATCAGAATCTTCCATTCTCCATGTTTTTCCTTTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCAGTTCAACAGCCAGACTCCCAAGTTCACATACACTGGAAGGGTGCTGCTGAATTAGTCCTAGCTTCATGCTCACAGTACTTGACCACAGACGATCATTTGGCTGCATTGGATGAAGACAAGAAAATGTATTTCAAGAAAGCAATCGAGGATATGGCTTCTCGTAGTCTGCGCTGTGTAGCCATCGCATACAGAACTTGTGAAAAGGAAAAAGTTCCAGTTAATGAGGAACAACTTAACAAGTGGGCACTACCGGAGGATGACCTCGTATTGTTGGCCATTGTTGGTATAAAGGACCCGTGTCGACCTAATGTGAAGGATGCTGTGCAGCTTTGCCAAAATGCGGGCATTAAGGTACGTATGGTCACAGGTGACAACCTGCAGACTGCTAGAGCTATCGCTTTAGAATGTGGCATACTTGGTTCAGATGCAGATGCCAATGAACCAAATCTTATTGAAGGAAGAGTCTTTCGTGAACTGTCTGATACACGGAGAGAAGAAATTGCTGAAAATATATCTGTGATGGGACGGTCCTCTCCCAATGATAAGCTTCTGCTTGTGCAAGCATTAAGGAGGAGGAAACATGTTGTTGCTGTTACTGGAGATGGAACCAATGATGCTCCTGCATTACATGAGGCAGACATTGGTCTTGCAATGGGTATCGCAGGGACTGAAGTTGCGAAGGAAAGCTCTGATATTATTATATTGGATGACAATTTTGCTTCTGTAGTTAAGGTTGTCAGGTGGGGCCGATCTGTGTATGCAAATATCCAGAAGTTCATTCAGTTTCAGCTGACTGTTAATGCTGCTGCTCTTGTCATAAATGTTGTGGCCGCAATTTCTTCAGGCGATGTTCCGCTAAATGCTGTGCAGCTTCTTTGGGTTAATCTTATCATGGATACTCTTGGAGCACTGGCATTGGCCACTGAACCACCAACAGATCACCTGATGCACAGGCCACCAGTTGGTAGAAAGGAACCTCTCATTACAAATATCATGTGGAGGAATTTGCTGATACAGGCCATGTATCAAGTGACTGTTCTTCTAATCCTCAATTATCGTGGGAGAAGCTTATTGCATTTGGAGGGTGACACTAGTGCGCAGAATAAAGTCAAGAATACACTTATATTCAACGCATTTGTTCTCTGTCAAGTTTTTAACGAGTTCAATGCTCGAAAACCAGATGAAAAGAACATATTCAAAGGGCTTACCAAAAATAAACTCTTTATTGGAATAGTGGGATTTACTCTTGTGTTACAGGTCATTCTCATTGAGTTTTCAGGAAAGTTCACTGATACTGTCAAGCTCAATTGGAAGCAGTGGTTGATTTCCATTATTATTGGTTTTATCAGTTGGCCTCTATGTCTTGTGGGAAAACTGATACCTGTTCCAGAAACTCCCATGTTCGAGTTCATTACAAAACGGTTTCATAGATGGAGGAATCTGCGAGCAGGTTAA 3204 42.95 MSNLKESPYRRRRDLEAGRTEEEESSSGPFDITRTKNASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKEAIMKIRSHAQVIRAAHRFIELGVNSNGTTAPVISDGESNVQEQLASLMKKHNLSALERYGGVKGLADMLQTNIEKGISGDDTDLQKRKDMYGSNTYPQKKGRSFWRFLWEAWQDLTLIILMIAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNDEKRNIHLEVTRGGRRVDVSIYDIVVGDVVPLNIGDQVPADGILISGHSLAIDESSMTGESKIVNKNAKEPFLMSGCKVADGSGTMLVTCVGINTEWGMLMASISEDTGEETPLQVRLNGVATCIGIVGLTVAFVVLVVLIVRYFTGHTTNEETSQFIAGKTKVGKAIDGVIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEVYAGGKKVEPPENKSELSQMLSSLLIEGIANNTNGSVYMAEGGGDVEVSGSPTEKAILSWGLKLGMNFETDRSESSILHVFPFNSEKKRGGVAVQQPDSQVHIHWKGAAELVLASCSQYLTTDDHLAALDEDKKMYFKKAIEDMASRSLRCVAIAYRTCEKEKVPVNEEQLNKWALPEDDLVLLAIVGIKDPCRPNVKDAVQLCQNAGIKVRMVTGDNLQTARAIALECGILGSDADANEPNLIEGRVFRELSDTRREEIAENISVMGRSSPNDKLLLVQALRRRKHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNAAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRKEPLITNIMWRNLLIQAMYQVTVLLILNYRGRSLLHLEGDTSAQNKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFKGLTKNKLFIGIVGFTLVLQVILIEFSGKFTDTVKLNWKQWLISIIIGFISWPLCLVGKLIPVPETPMFEFITKRFHRWRNLRAG 1067
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31727612 31749046 + Conep02aG0167600.1 Cone2ag0665 433132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 38 94 - -
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 183 240 - -
Cone2ag0665 1067 SUPERFAMILY Calcium ATPase, transduction domain A 253 348 IPR008250 -
Cone2ag0665 1067 MobiDBLite consensus disorder prediction 1 33 - -
Cone2ag0665 1067 Pfam Cation transporter/ATPase, N-terminus 132 200 IPR004014 -
Cone2ag0665 1067 CDD P-type_ATPase_Ca_PMCA-like 157 915 - -
Cone2ag0665 1067 MobiDBLite consensus disorder prediction 1 29 - -
Cone2ag0665 1067 Pfam E1-E2 ATPase 253 452 - -
Cone2ag0665 1067 Gene3D - 183 1033 - -
Cone2ag0665 1067 NCBIfam calcium-translocating P-type ATPase, PMCA-type 123 1045 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cone2ag0665 1067 ProSitePatterns E1-E2 ATPases phosphorylation site. 476 482 IPR018303 -
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 9 plasma membrane-type 329 498 - -
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 484 682 - -
Cone2ag0665 1067 Gene3D - 471 827 IPR023214 -
Cone2ag0665 1067 SFLD p-type atpase 456 834 IPR044492 -
Cone2ag0665 1067 PANTHER CATION TRANSPORTING ATPASE 99 1045 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cone2ag0665 1067 Pfam Ca2+-ATPase N terminal autoinhibitory domain 29 70 IPR024750 GO:0005516(InterPro)
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 675 827 - -
Cone2ag0665 1067 Gene3D - 484 682 IPR023299 GO:0000166(InterPro)
Cone2ag0665 1067 SUPERFAMILY HAD-like 472 887 IPR036412 -
Cone2ag0665 1067 Gene3D - 155 351 - -
Cone2ag0665 1067 SFLD Haloacid Dehalogenase 456 834 - -
Cone2ag0665 1067 Pfam Cation transporting ATPase, C-terminus 867 1043 IPR006068 -
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 799 1047 - -
Cone2ag0665 1067 SUPERFAMILY Calcium ATPase, transmembrane domain M 132 1045 IPR023298 -
Cone2ag0665 1067 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 481 679 IPR023299 GO:0000166(InterPro)
Cone2ag0665 1067 SMART Cation_ATPase_N_a_2 131 205 IPR004014 -
Cone2ag0665 1067 NCBIfam HAD-IC family P-type ATPase 413 509 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone2ag0665 1067 NCBIfam HAD-IC family P-type ATPase 749 862 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone2ag0665 1067 Gene3D - 38 94 - -
Cone2ag0665 1067 FunFam Calcium-transporting ATPase 230 351 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 782 801 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 474 488 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 697 707 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 299 313 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 675 686 - -
Cone2ag0665 1067 PRINTS P-type cation-transporting ATPase superfamily signature 806 818 - -
Cone2ag0665 1067 Pfam haloacid dehalogenase-like hydrolase 472 796 - -
Cone2ag0665 1067 PRINTS Sodium/potassium-transporting ATPase signature 467 488 - -
Cone2ag0665 1067 PRINTS Sodium/potassium-transporting ATPase signature 218 238 - -
Cone2ag0665 1067 PRINTS Sodium/potassium-transporting ATPase signature 593 611 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0021 Cone-Chr17:157509 Cone2ag0665 Cone-Chr2:31727612 0 dispersed
Cone20ag0829 Cone-Chr20:5887976 Cone2ag0665 Cone-Chr2:31727612 1.02E-151 dispersed
Cone20ag1385 Cone-Chr20:8835107 Cone2ag0665 Cone-Chr2:31727612 1.68E-41 dispersed
Cone2ag0665 Cone-Chr2:31727612 Cone7ag0285 Cone-Chr7:1209868 0 dispersed
Cone16ag0301 Cone-Chr16:3467576 Cone2ag0665 Cone-Chr2:31727612 6.11E-48 wgd
Cone16ag0324 Cone-Chr16:3989076 Cone2ag0665 Cone-Chr2:31727612 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0665 K01537 - csv:101211703 1636.31