Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0674 ATGCCGAGGAAGAGAAGAACTGAACATCCTAGTGGAGGTGAGAGCTCCTCCGAGTCTCAGGGTGGTGGCCGTGGGGCCCATCTACCAGGTCCAGGTCCCCAACCAGGTCGTGGAGGTTATGGTGGTGGCTATGGAGGAGGTCACAGCGGCCATGGTGGTGGTGGTGGCCGTGGACGAGGACCCCCTCCTCCGTCTAGTAGTGGCCCATCTAGGGCATCAGTTCCCGAGCTGCATCAAGCAAACCCCTCAACTCCTTCTCAAGCTAGGGCTTATAGTCCAATGCCCCCATCAGAGGCGAGTTCATCTCACCACCCACCACCAGTTTTACACACTGAACAGCAGTTTGAGCAGCTTAGCATACAACCAGTGCTCCCGTCTTCAAGTAAAACTATGAGGTTTCCTCTACGCCCTGGTAAGGGAAGTTTTGGTACAAAGTGTATTGTCAAAGCTAATCACTTCTTTGCTGAATTGCCGGACAAAGACCTGCATCAATATGATGTTACTATTGCACCGGAGGTGACATCACGAGCTGTGAACCGTGCTGTGATGGAGCAGCTGGTAAAATTGTACCGTGAATCACATCTTGGGAGGCGGCTCCCTGCCTATGATGGAAGAAAGAGTCTTTACACTGCTGGGCCACTTCCTTTTGTTTCGATGGAATTCAAAATCACTCTCATTGATGAAGATGATGGATCTGGAGGACAAAGGAGAGAGAGGGAATTTAAAGTTGTAATCAAACTGGCTGCACGTGCTGACCTGCATCATTTAGGACTCTTTCTGCAGGGAAGACAGGCTGATGCACCTCAAGAAGCCATTCAGGTTCTTGACATTGTTCTTCGTGAATTGCCTACTTCTAGGTATTGTCCAGTGGGCCGCTCATTTTACTCACCTAATTTAGGAAGACGTCAAACACTAGGTGAGGGTTTAGAAAGCTGGCGAGGCTTTTATCAAAGTATTCGCCCAACTCAGATGGGACTCTCTTTGAATATTGATATGTCTTCTACTGCATTCATTGAGCCCTTGCCTGTAATTGATTTTGTTGCACAGCTTCTCAATCGAGAAGTATCATCCCGACCATTATCTGATTCTGATCGGATTAAGATAAAAAAGGCTTTACGAGGAGTTAAAGTTGAAGTAACTCACCGTGGAAATATGCGAAGAAAATACCGTATTTCTGGTTTAACATCACAGGGAACCCGTGAGCTTACATTCCCTGTTGATGAAAGAGGTACAATGAAATCTGTTGTCGAGTACTTCCATGAGACATATGACTTTACCATTCGACATACACAATGGCCTTGCCTTCAAGTTGGAAATCAGCAAAGACCAAATTATTTGCCAATGGAGGTTTGCAAGATTGTTGAGGGTCAAAGATACTCCAAGAGGTTGAATGAACGTCAGATAACTGCTTTGCTGAAGGTTACCTGCCAGCGTCCTCAGGAACGAGAGCGTGACATTATGCAGACAGTTCGTCATAATGCTTATCATGATGATCCTTATGCAAAGGAGTTTGGTATCAAAATCAGTGAGAAGCTTGCTTCTGTTGAAGCTCGAATTCTCCCTCCGCCATGGCTCAAATATCACGACACAGGCAGGGAAAAGGATTGCTTGCCACAAGTTGGACAATGGAACATGATGAATAAAAAAATGGTCAATGGGGGCATAGTTAATCAGTGGATCTGCATTAACTTCTCTAGGAATGTGCAAGACAGTGTGGCCCGCGGATTTTGTTATGAACTTGCTCAAATGTGCCACATTTCTGGCATGGCATTCAATCCAGAACCAGTACTTCCTCCAGTCAGTGCTCGTCCTGATCAGGTTGAGAAGGTCCTCAAAACTCGATATCATGATGCAATGACCAAACTCAAGGGCAAGGAGCTTGATCTGCTTATTGTCATTTTGCCAGACGTTAATGGCTCTCTTTATGGTGATCTGAAACGCATTTGTGAGACAGATCTTGGCATAGTTTCTCAATGCTGCTTAACAAAGCATGTATTCAGGATGAGCAAACAGTATTTAGCTAATGTGGCTCTGAAGATAAATGTGAAAGTGGGGGGAAGGAATACAGTTTTGGTGGATGCCCTTTCAAGGCGTATTCCTTTAGTTAGTGACCAACCTACTATAATTTTTGGTGCTGATGTTACCCATCCTCATCCAGGGGAGGATTCAAGCCCGTCCATTGCAGCTGTTGTGGCTTCACAAGATTGGCCCGAAATCACAAAATATGCTGGTTTAGTTTGTGCTCAAGCACACCGACAAGAGCTCATTCAAGATCTGTTCAAAACATGGCAGGATCCTATAAGAGGAACAGTATCCGGTGGAATGATCAAGGAGCTACTTATATCTTTCCATAGAGCCACAAGACAGAAACCGCAGCGTATCATCTTTTACAGGGATGGCGTGAGTGAGGGACAGTTCTATCAAGTATTGCTTTACGAACTTGATGCAATTCGTAAGGCATGTGCCTCTTTGGAGCCTAATTATCAGCCTCCAGTGACTTTTGTAGTCGTTCAGAAACGTCATCACACAAGACTTTTTGCTAATAGCCATTCTGACCGTAATGCTGTTGATCGGAGTGGAAACATATTACCAGGTACAGTTGTGGACTCCAAAATCTGTCATCCAACTGAATTTGACTTCTATTTATGCAGCCATGCCGGAATACAGGGAACAAGCCGTCCAGCTCATTACCATGTCCTTTGGGATGAGAACAAGTTCACAGCTGATGGGTTACAGTCCCTCACAAATAATCTTTGCTATACATATGCAAGATGCACGAGGTCTGTTTCGATTGTGCCTCCAGCATATTACGCCCACCTTGCAGCATTTCGAGCTCGTTTCTATATGGAACCCGAGACCTCTGATAGTGGTTCAATGATCAGTGCTGCCACTGGACGTGGTGGTGCTGCCCGTGGCACACGAGTTCCAGGTGCAAATGCTGCTGTCAGACCACTTCCTGCGCTGAAAGAGAATGTCAAGAGGGTTATGTTCTACTGTTAA 3000 45.73 MPRKRRTEHPSGGESSSESQGGGRGAHLPGPGPQPGRGGYGGGYGGGHSGHGGGGGRGRGPPPPSSSGPSRASVPELHQANPSTPSQARAYSPMPPSEASSSHHPPPVLHTEQQFEQLSIQPVLPSSSKTMRFPLRPGKGSFGTKCIVKANHFFAELPDKDLHQYDVTIAPEVTSRAVNRAVMEQLVKLYRESHLGRRLPAYDGRKSLYTAGPLPFVSMEFKITLIDEDDGSGGQRREREFKVVIKLAARADLHHLGLFLQGRQADAPQEAIQVLDIVLRELPTSRYCPVGRSFYSPNLGRRQTLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNREVSSRPLSDSDRIKIKKALRGVKVEVTHRGNMRRKYRISGLTSQGTRELTFPVDERGTMKSVVEYFHETYDFTIRHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQERERDIMQTVRHNAYHDDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGIVNQWICINFSRNVQDSVARGFCYELAQMCHISGMAFNPEPVLPPVSARPDQVEKVLKTRYHDAMTKLKGKELDLLIVILPDVNGSLYGDLKRICETDLGIVSQCCLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDQPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKTWQDPIRGTVSGGMIKELLISFHRATRQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANSHSDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMISAATGRGGAARGTRVPGANAAVRPLPALKENVKRVMFYC 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32001583 32010053 + Conep02aG0168500.1 Cone2ag0674 433141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0674 999 MobiDBLite consensus disorder prediction 70 108 - -
Cone2ag0674 999 Gene3D - 519 692 - -
Cone2ag0674 999 MobiDBLite consensus disorder prediction 1 108 - -
Cone2ag0674 999 Pfam PAZ domain 345 471 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0674 999 Pfam Piwi domain 630 949 IPR003165 GO:0003676(InterPro)
Cone2ag0674 999 Gene3D paz domain 334 459 - -
Cone2ag0674 999 SMART Piwi_a_2 629 950 IPR003165 GO:0003676(InterPro)
Cone2ag0674 999 ProSiteProfiles PAZ domain profile. 342 455 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0674 999 Pfam N-terminal domain of argonaute 145 279 IPR032474 -
Cone2ag0674 999 FunFam Protein argonaute-2 334 460 - -
Cone2ag0674 999 SMART DUF1785_2 288 340 IPR014811 -
Cone2ag0674 999 FunFam Argonaute 10 519 692 - -
Cone2ag0674 999 FunFam protein argonaute 10-like 698 999 - -
Cone2ag0674 999 Pfam Argonaute linker 2 domain 481 527 IPR032472 -
Cone2ag0674 999 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 137 956 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cone2ag0674 999 ProSiteProfiles Piwi domain profile. 629 950 IPR003165 GO:0003676(InterPro)
Cone2ag0674 999 SMART PAZ_2_a_3 345 477 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone2ag0674 999 CDD PAZ_argonaute_like 340 454 - -
Cone2ag0674 999 SUPERFAMILY PAZ domain 147 491 IPR036085 GO:0005515(InterPro)
Cone2ag0674 999 Pfam Mid domain of argonaute 538 613 IPR032473 -
Cone2ag0674 999 Pfam Argonaute linker 1 domain 289 339 IPR014811 -
Cone2ag0674 999 SUPERFAMILY Ribonuclease H-like 615 950 IPR012337 -
Cone2ag0674 999 CDD Piwi_ago-like 499 949 IPR045246 -
Cone2ag0674 999 Pfam Glycine-rich region of argonaut 37 127 IPR024357 -
Cone2ag0674 999 Gene3D - 698 999 IPR036397 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1552 Cone-Chr11:10823950 Cone2ag0674 Cone-Chr2:32001583 3.03E-164 dispersed
Cone18ag0041 Cone-Chr18:251206 Cone2ag0674 Cone-Chr2:32001583 1.09E-154 dispersed
Cone19ag0371 Cone-Chr19:3158324 Cone2ag0674 Cone-Chr2:32001583 0 dispersed
Cone19ag0924 Cone-Chr19:7134156 Cone2ag0674 Cone-Chr2:32001583 7.33E-197 dispersed
Cone2ag0674 Cone-Chr2:32001583 Cone7ag0283 Cone-Chr7:1195885 0 dispersed
Cone2ag0674 Cone-Chr2:32001583 Cone13ag0363 Cone-Chr13:3287540 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0674 K11593 - rcu:8275074 1682.92