Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0683 ATGGCGAGTAAGCTGGGGCTGCAAAGAACTTACTTTGATGTGTTGGGTCTATGCTGCTCGTCCGAAGTGAGCCTGATCGAAAATATTCTGAAACCTCTTGATGGGGTTAAAGAGGTTTCAGTCATAGTTCCCACTAGAACTCTCATTGTTGTTCATGATAACCTCCTCGTTTCTCAGCTTCAAATCGTGAAGGCTCTAAATCAAGCAAGGCTAGAAGCAAATGTAAGAATGTATGGAGATAAGGATTCTCAGAAAATGTGGCCGAGTCCTTGGGCAGTAGTGAGTGGTCTATTGCTTGTGCTCTCACTATTGAAGTATGTGTTCCCTCCAATGCAGTGGTTAGCTTTAGGTGCTGTTTCAATCGGCATCGTTCCCATTGTTCTTAAAGCTATTACTGCCCTTCGGAATTCCAGGTTTTATGATATCAACATCCTCATAGTTATTGCAGTGATAGGAACAATTGCATTGAAAGATTATCTAGAAGCAGGGACTATAGTCTTCCTCTTCACCATTGCCGAATGGCTCCAGTCGAGAGCAAGCCACAAGACCAAAGTTGTGATGACTTCTCTAATGAGCATCTCCCCGAAAAAAGCAGTCATATCTGAAACCGGAGAAGAAGTTGACGTGGATGAGGTCAAGTTAAACACGGTCATTGCTGTTAAGGCCGGAGAAGTTATACCGATAGATGGAATTGTTATGGATGGAAACTGTGAAGTTGATGAGAAAACTCTAACCGGGGAATCTTTCCCAGTTGCCAAACAGAAAGATTCCACCGTCTTTGCTGGAACAATGAATCTAAATGGTTATGTTAGTGTGAAAACTACTGCTTTAGCTGAAGATTGTGTGGTGGCCAAAATGGTTAAGCTTGTAGAAGATGCTCAAAACAATAAATCTAGTACTGAGAGAATAATTGACAAATATACCAAATTTTATACCCCAGCGGTTTTATTGATATCGATCCTCATTGCGGTAATTCCAGCAGCTTTAAGAGTTAAGAATCAAAGCCACTGGTTTCACTTAGCCCTGGTTGTTCTAGTAAGCGCATGTCCATGTGCGCTGATACTTTCTACACCAGTTGCCACATTTTGTGCTCTTACAAGAGCCGCCTCCTCCGGGCTTCTAATCAAGGGAGGCAACTTCCTCGAAATTCTTGCTAAGGTTAAGGTCATGGCCTTTGACAAAACCGGCACCATTACTAGAGCCGAATTTGTGGTCACCAACTTTCAAGCTCTTCAAGACGATGTTACCCTTAACACCTTGCTTTATTGGGTTTCAAGCATAGAGAGCAAGTCAAGTCATCCAATGGCAGATGCAATTGTTGATTATGGAAAATCGCTTTCTATTGACCCGAAACCTGAAAATGTGGGCGTGTTTGAAAATTTTCCGGGAGAAGGAGTTCATGGAGTAATAGATGGAAATGACATCTATATTGGAAGTAGGAAGATTGCTGCAAGGGCTTGTCGCAAAACAGTTCCAAATCTGGATGAAGAATCAAAGGAAGGAAAGAGTGTTGGATACATTTTTTGTGGAGGTAGGCTAGTAGGAGATCTTTGTTTGTCCGATGCTTGTCGGACCGGAGCGGAGCAGGCGATCAAAGAACTCAAGTCAATGGGAATCAAAACGGCTATGCTTACCGGAGATTGTAATGCTGCTGCCATGCATGCCCAAAAACAGCTAAGGAATGCTCTAGAGATAGTCCATGCTGATCTTCTACCAGAAGAAAAAGCAAAGTTCATCGACCAATTCAAGAAAGAGATAGGACTGACGGCCATGATAGGTGACGGTATTAATGACGCACCTGCCTTAGCCACGGCCGATATTGGGATTTCAATGGGCATCTCAGGTTCCGCACTTGCATCAGAGACTGGAAACATCATCCTTATGTCGAACGACATAACGAAGATCCCAAAAGCTATAAGGCTTTCAAGGCGGGCCCGAAATAAAGTGATTCAAAATGTGATTCTCTCCATAACTACTAAGCTTGCTATCCTTGCTCTGTCTATTGCCGGTCATCCGCTTGTCTGGGCAGCTGTTCTTGCTGATGTCGGGACATGCTTACTTGTCATATTCAATAGTATGACACTTTTGAGAGGAGTTTACACTCCTAAGAAGAAACATTGCTGCAAATCTTCCGGTATACAACACTCACATGGTAATCAATGCAGTACGACGTCGAATGGCCTGTCTTCTCATGATCACCAGCATGGATCCCATGGTAGTGGTCATCATCACCATCATGATGATCACCATGATCGCCTTCATGATGACCCCCATCATCATCACGAATCCCAAGATCATCACCATCATGGAACTGACAATTGTCATCGCATCCGTAAGCAATGTGCTTCAAAGTGTTCTAATGATCATCACAGGCCAAATGAGAAAGCGAAAGCCTTGAAATCATGCACAGAGGCTCATCCTAAATTTATGGATCAAGGTCATGGTGAAGAAAGAGAGAAATGCCATTCAAACCATTGTCATGATCATGAACATGTTGAGCCTAGCTCATCCGATTGTGGCTTGAACATGTGGAGTGGAGACGAGAAGAAGTCGGATCATAGCATTATTGATTGTGTTGGTTCAGATGATGTGGAGTTGGAGAAGAGAAAAAGAAGTTGTGATGATGATCAGGGGAGTAGCAGTAGTAGTAATAGTTTGAAGGCATGTTGCAAAAGTCTGGACAAAAGAGAAGTGGCTGGATGTTGCAAGAGCTACTACATGAAGGAATGTTGTGCGAATAAGCATTCACATTTCGGCCCTGGTCACTCAAGTGGTGGGCTGACTGAAGTTGTGATAGAGTAG 2802 43.29 MASKLGLQRTYFDVLGLCCSSEVSLIENILKPLDGVKEVSVIVPTRTLIVVHDNLLVSQLQIVKALNQARLEANVRMYGDKDSQKMWPSPWAVVSGLLLVLSLLKYVFPPMQWLALGAVSIGIVPIVLKAITALRNSRFYDINILIVIAVIGTIALKDYLEAGTIVFLFTIAEWLQSRASHKTKVVMTSLMSISPKKAVISETGEEVDVDEVKLNTVIAVKAGEVIPIDGIVMDGNCEVDEKTLTGESFPVAKQKDSTVFAGTMNLNGYVSVKTTALAEDCVVAKMVKLVEDAQNNKSSTERIIDKYTKFYTPAVLLISILIAVIPAALRVKNQSHWFHLALVVLVSACPCALILSTPVATFCALTRAASSGLLIKGGNFLEILAKVKVMAFDKTGTITRAEFVVTNFQALQDDVTLNTLLYWVSSIESKSSHPMADAIVDYGKSLSIDPKPENVGVFENFPGEGVHGVIDGNDIYIGSRKIAARACRKTVPNLDEESKEGKSVGYIFCGGRLVGDLCLSDACRTGAEQAIKELKSMGIKTAMLTGDCNAAAMHAQKQLRNALEIVHADLLPEEKAKFIDQFKKEIGLTAMIGDGINDAPALATADIGISMGISGSALASETGNIILMSNDITKIPKAIRLSRRARNKVIQNVILSITTKLAILALSIAGHPLVWAAVLADVGTCLLVIFNSMTLLRGVYTPKKKHCCKSSGIQHSHGNQCSTTSNGLSSHDHQHGSHGSGHHHHHDDHHDRLHDDPHHHHESQDHHHHGTDNCHRIRKQCASKCSNDHHRPNEKAKALKSCTEAHPKFMDQGHGEEREKCHSNHCHDHEHVEPSSSDCGLNMWSGDEKKSDHSIIDCVGSDDVELEKRKRSCDDDQGSSSSSNSLKACCKSLDKREVAGCCKSYYMKECCANKHSHFGPGHSSGGLTEVVIE 933
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32188891 32194693 - Conep02aG0169600.1 Cone2ag0683 433150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0683 933 FunFam Copper-transporting ATPase 1, putative 180 294 - -
Cone2ag0683 933 MobiDBLite consensus disorder prediction 712 734 - -
Cone2ag0683 933 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 7 912 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Cone2ag0683 933 CDD HMA 12 73 IPR006121 GO:0046872(InterPro)
Cone2ag0683 933 Gene3D - 402 523 IPR023299 GO:0000166(InterPro)
Cone2ag0683 933 SFLD Haloacid Dehalogenase 374 644 - -
Cone2ag0683 933 CDD P-type_ATPase_HM 113 693 - -
Cone2ag0683 933 MobiDBLite consensus disorder prediction 709 772 - -
Cone2ag0683 933 SFLD p-type atpase 374 644 IPR044492 -
Cone2ag0683 933 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Cone2ag0683 933 MobiDBLite consensus disorder prediction 744 772 - -
Cone2ag0683 933 NCBIfam HAD-IC family P-type ATPase 165 668 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone2ag0683 933 Gene3D - 5 77 - -
Cone2ag0683 933 NCBIfam heavy metal translocating P-type ATPase 142 695 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone2ag0683 933 ProSiteProfiles Heavy-metal-associated domain profile. 8 74 IPR006121 GO:0046872(InterPro)
Cone2ag0683 933 PRINTS Cadmium-transporting ATPase signature 177 197 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone2ag0683 933 PRINTS Cadmium-transporting ATPase signature 23 44 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone2ag0683 933 PRINTS Cadmium-transporting ATPase signature 256 272 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone2ag0683 933 PRINTS Cadmium-transporting ATPase signature 275 289 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone2ag0683 933 Gene3D - 384 643 IPR023214 -
Cone2ag0683 933 FunFam Putative cadmium/zinc-transporting ATPase 3 4 77 - -
Cone2ag0683 933 Gene3D - 179 294 - -
Cone2ag0683 933 SUPERFAMILY HMA, heavy metal-associated domain 7 74 IPR036163 GO:0046872(InterPro)
Cone2ag0683 933 NCBIfam cadmium family heavy metal-translocating P-type ATPase 142 488 - -
Cone2ag0683 933 SUPERFAMILY HAD-like 390 693 IPR036412 -
Cone2ag0683 933 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Cone2ag0683 933 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Cone2ag0683 933 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Cone2ag0683 933 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Cone2ag0683 933 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Cone2ag0683 933 SUPERFAMILY Calcium ATPase, transduction domain A 203 290 IPR008250 -
Cone2ag0683 933 ProSitePatterns Hypothetical cof family signature 2. 592 614 - -
Cone2ag0683 933 FunFam Putative cadmium/zinc-transporting ATPase 3 402 523 - -
Cone2ag0683 933 Pfam haloacid dehalogenase-like hydrolase 387 606 - -
Cone2ag0683 933 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 669 IPR023298 -
Cone2ag0683 933 Pfam E1-E2 ATPase 201 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0683 Cone-Chr2:32188891 Cone8ag0313 Cone-Chr8:1804426 2.98E-67 dispersed
Cone16ag0309 Cone-Chr16:3628541 Cone2ag0683 Cone-Chr2:32188891 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0683 K01534 - rcu:8289731 1056.59