Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0699 ATGTTAGCCAATAACTACTCTTCTTCCTCCACCTCCCATCCGATTTCTTCCGAGCCCTTTTCTTGCTCGGAAAATGGAAACAACAAGAGAAGACGAAGGCCTGCCGGAACTCCTGATCCGGATGCAGAGGTGGTGTCTCTCTCGCCAAAGACATTACTAGAATCGGACCGTTACGTCTGCGAGATCTGCAAGCAGGGATTCCAGAGAGATCAGAATCTGCAGATGCATCGGCGAAGGCACAAAGTGCCATGGAAGTTTCTGAAGAGAGAGAGCGCATCGGTGAAGAAGCGCGTGTTTGTATGCCCCGAGCCAAGCTGCTTGCACCACTCCCCGTTCCATGCACTCGGCGATCTTGTCGGGATCAAGAAGCACTTCAGGAGGAAACACAGCGACCGTAAGCAGTGGGTTTGTGAGAGATGCTCCAAGGGTTATGCAGTTCAATCAGACTACAAAGCACATCTCAAGACCTGTGGGACTAGAGGTCATTCTTGCGATTGCGGCCGTGTTTTCTCGAGGATGGAGAGCTTTATAGAACATCAAGATGCTTGCAATGTTAATAATAATGGAGCGCGTCTCAATCCAGAACCACAAATAAAGCAGTCAGCTACTTCCACTCCATGTTTGTCCCGAACAGCTTCCAGTCCGACCCCGTCCAAAGACACCAACCGCAGCGCAGCTGCTCCTATCTGGCCTCATTCTCTGGCACCAATTCCTCGACCGACTAAGCCCGCTCACACCATCACAGCCCTCGTTTCGCATAACTTGGATCTTAAACTCTCTACTACATCATCAAATATAAATCCTATGAATTATGAACAATTTTCAGTTTCTCCGAAAACAGATGAAACCCAACATTCAACCAATTTGCATCTATCAATTGGCTCATCGTCATGCGATCATAGTGATAGCGATACTGAGCGATCTGGGTTCATGGCTGCTTCGAAGATTAAAGAACGAGCGCACGAGCAACTAAACATTGCCATGGCAGAAAAAGCACGTGCTGAAGAGGTAAGGCAGGAGGCAAAGAGGCAGATTGAACTAGCCGAGAAGGAGTTTGCGAATGCTAAGCTAATGAGACAGCAAGCGCAAGCCGAGTTAGATAAGGCTCAGGCCTTGAAAGACCATGCTATTAGACAAATGAACTCCACCATCTTACAAATTACTTGCCGGGCGTGCCAACAACAATTTCAAATCAGAAAAGTAATTGATCAACAAACAGAAGGTCATGAAATAGATAAAAGAGTTCTACTGCTACATACATCAACTATGCTGATGAATAAACTTAATTTGCCATTAAATTCGTGA 1305 46.59 MLANNYSSSSTSHPISSEPFSCSENGNNKRRRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICKQGFQRDQNLQMHRRRHKVPWKFLKRESASVKKRVFVCPEPSCLHHSPFHALGDLVGIKKHFRRKHSDRKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRMESFIEHQDACNVNNNGARLNPEPQIKQSATSTPCLSRTASSPTPSKDTNRSAAAPIWPHSLAPIPRPTKPAHTITALVSHNLDLKLSTTSSNINPMNYEQFSVSPKTDETQHSTNLHLSIGSSSCDHSDSDTERSGFMAASKIKERAHEQLNIAMAEKARAEEVRQEAKRQIELAEKEFANAKLMRQQAQAELDKAQALKDHAIRQMNSTILQITCRACQQQFQIRKVIDQQTEGHEIDKRVLLLHTSTMLMNKLNLPLNS 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32559838 32561818 - Conep02aG0171200.1 Cone2ag0699 433166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0699 434 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 134 158 - -
Cone2ag0699 434 Pfam BIRD-IDD transcription factor, second C2H2 zinc finger 95 129 - -
Cone2ag0699 434 MobiDBLite consensus disorder prediction 194 223 - -
Cone2ag0699 434 MobiDBLite consensus disorder prediction 1 44 - -
Cone2ag0699 434 Coils Coil 317 379 - -
Cone2ag0699 434 MobiDBLite consensus disorder prediction 1 24 - -
Cone2ag0699 434 Pfam BIRD-IDD transcription factor, fourth C2HC zinc finger 162 188 - -
Cone2ag0699 434 FunFam protein indeterminate-domain 12-like 37 105 - -
Cone2ag0699 434 Gene3D Classic Zinc Finger 120 197 - -
Cone2ag0699 434 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 384 IPR031140 GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone2ag0699 434 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Cone2ag0699 434 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Cone2ag0699 434 SMART c2h2final6 58 80 IPR013087 -
Cone2ag0699 434 SMART c2h2final6 135 162 IPR013087 -
Cone2ag0699 434 SMART c2h2final6 99 129 IPR013087 -
Cone2ag0699 434 MobiDBLite consensus disorder prediction 194 239 - -
Cone2ag0699 434 Pfam Zinc finger, C2H2 type 58 80 IPR013087 -
Cone2ag0699 434 SUPERFAMILY beta-beta-alpha zinc fingers 57 155 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0310 Cone-Chr19:2386394 Cone2ag0699 Cone-Chr2:32559838 7.95E-120 dispersed
Cone2ag0699 Cone-Chr2:32559838 Cone6ag1610 Cone-Chr6:12459846 3.23E-70 dispersed
Cone16ag0268 Cone-Chr16:2992420 Cone2ag0699 Cone-Chr2:32559838 3.76E-238 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45721 PF00067 p450 1.30E-96 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0699 K25871 - rcu:8261817 507.294