Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0700 ATGTTGGAAGGTGGTCCAAAATTCGCCGGAATGATCGATTTAAATACCAGGCACGATTATGATTTATCGCAAGGCTTTTACCATAAACTTGGCGAGGGTACAAACATGTCCATCGACAGCTTTGCAAGCTTGCGAACAAGTAATGATGGAGGGTCCGTTGCAATGTCTGTAGATAACAGTAGTGTCGGCTCGAATGATTCCCATACTCGGATTTTGAACCACCAAGGCTTGAAGCAAAGATCAAATGATAACTACACTGTCCAGCAGAGTGTGAATCATAGAGGAAGAGTCACTCATGCTTTGAGTGATGATGGACTGGCTCGAGCTTTGTTCGACACTAATACCCCCACTAGAGGGCTTGAAAACTTTGAGCAATGGACTCTCGATTTGAGAATGCTTAACATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTTTACAGAGGTACTTACAATGGTGAGGATGTTGCTATCAAGATCTTGGAGAGGCCAGAAAATGACCTTGAAAAGGCTCAGTTGATGGAGCAACAGTTTCAGCAGGAGGTTAAGATGCTTGCTACATTGAAGCACCCAAACATAGTTCGATTTATTGGGGCATGTCATAAGCCCATGGTTTGGTGCATTGTGACCGAATATGCAAAGGGTGGGTCAGTGAAGCAGTTCTTGGCAAAGCGACAGAATCGAACTGTACCACTCAAATTAGCTGTGAAACAAGCTTTGGATGTTGCTAGGGGGATGGAATTTGTTCATGGGTTTGGATTGATCCATCGGGACTTAAAATCTGACAATCTCTTGATATTTTCCGATAGGTCCATAAAGATTGCTGATTTTGGGGTTGCGAGGATTGAGGTGCAGACTGAAGGAATGACTCCTGAGACTGGAACATACCGGTGGATGGCTCCGGAGATGATCCAGCACAGGCCTTACACACAGAAGGTGGATGTATACAGCTTTGGGATCGTACTTTGGGAACTGATTACGGGAATGCTCCCGTTCCAGAACATGACTGCTGTTCAGGCAGCTTTTGCGGTGGTTAACAAGAATTTCCGGCCAATCATTCCCAATGACTGTTTACCTGAACTTGCTGAGATTATGACTCGGTGCTGGGATGCTAATCCGGATGTGAGGCCTCCTTTTACAGAAGTTGTTAGAATGCTCGAGCATGCACAGACTGAGATCATGACAACGACCCGTAAGGCTCGTTTTAGGTGCTGCATCTCCCAGCCAATGACGACGGACTGA 1245 45.86 MLEGGPKFAGMIDLNTRHDYDLSQGFYHKLGEGTNMSIDSFASLRTSNDGGSVAMSVDNSSVGSNDSHTRILNHQGLKQRSNDNYTVQQSVNHRGRVTHALSDDGLARALFDTNTPTRGLENFEQWTLDLRMLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPENDLEKAQLMEQQFQQEVKMLATLKHPNIVRFIGACHKPMVWCIVTEYAKGGSVKQFLAKRQNRTVPLKLAVKQALDVARGMEFVHGFGLIHRDLKSDNLLIFSDRSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNFRPIIPNDCLPELAEIMTRCWDANPDVRPPFTEVVRMLEHAQTEIMTTTRKARFRCCISQPMTTD 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32593335 32598053 - Conep02aG0171300.1 Cone2ag0700 433167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0700 414 CDD STKc_MAP3K-like 140 387 - -
Cone2ag0700 414 SMART serkin_6 133 392 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 FunFam serine/threonine-protein kinase HT1 216 409 - -
Cone2ag0700 414 PRINTS Tyrosine kinase catalytic domain signature 249 267 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 PRINTS Tyrosine kinase catalytic domain signature 295 305 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 PRINTS Tyrosine kinase catalytic domain signature 211 224 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 PRINTS Tyrosine kinase catalytic domain signature 314 336 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Cone2ag0700 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 Pfam Protein tyrosine and serine/threonine kinase 134 387 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 SUPERFAMILY Protein kinase-like (PK-like) 119 387 IPR011009 -
Cone2ag0700 414 PANTHER SERINE-THREONINE PROTEIN KINASE 81 388 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone2ag0700 414 ProSiteProfiles Protein kinase domain profile. 133 392 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0700 414 FunFam Serine/threonine-protein kinase isoform 1 123 215 - -
Cone2ag0700 414 Gene3D Transferase(Phosphotransferase) domain 1 216 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0266 Cone-Chr16:2951918 Cone2ag0700 Cone-Chr2:32593335 1.10E-206 dispersed
Cone2ag0636 Cone-Chr2:30695726 Cone2ag0700 Cone-Chr2:32593335 5.78E-117 dispersed
Cone2ag0700 Cone-Chr2:32593335 Cone5ag1835 Cone-Chr5:12907493 3.11E-94 dispersed
Cone4ag0275 Cone-Chr4:1234844 Cone2ag0700 Cone-Chr2:32593335 5.22E-19 dispersed
Cone2ag0637 Cone-Chr2:30699838 Cone2ag0700 Cone-Chr2:32593335 6.96E-36 transposed
Cone1ag0167 Cone-Chr1:930630 Cone2ag0700 Cone-Chr2:32593335 1.58E-86 wgd
Cone16ag0263 Cone-Chr16:2923665 Cone2ag0700 Cone-Chr2:32593335 9.14E-299 wgd
Cone16ag0342 Cone-Chr16:4435812 Cone2ag0700 Cone-Chr2:32593335 1.56E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82620 PF00067 p450 4.50E-99 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0700 - - - 0.0