Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0738 ATGGCTGTTGTTCGTGAGCGCCGCCAGCTCAATCTCCGCCTACCAGACCTCTCTGACCGCCGCCCTTGCTTCCCTCTGTCCCTGCCTCCTTGTTCAACCACCGCAGCTACAACAACCACATCTTCCAACACCGCTATCTCCACTTCCGATCTAGAGAAGCTTCAAGTCCTCGGCCACGGCAACGGGGGCACCGTATATAAAGTCCGTCACAAGAGAACTTCCATGATCTACGCGCTTAAAGTTATCCATGGAGACTGTGACCCTGACGTGCGCCGCCAGGTCTTTCGCGAGATGGAAATTCTCCGCCGTACCGACTCCCCTTGGGTGGTTCGGTGTCAGGCTTTCTTTGAGAAGCCGTCAAGCGACATAGCGATTCTTATGGAATATATGGACTTAGGGTCTCTAGACTCGCTTATGAAAACGCAGAAAACCTTGTCCGAACACACTCTTGCGCACGTGGCGCGGCAGGTACTGAATGGGCTTAGTTACCTTCACTCCCACAAGATCATTCATCGCGACATCAAGCCTTCCAATCTACTAGTAAACCAGAAGATGGAGGTGAAGATAGCCGATTTCGGGGTTAGCAAGATCATGTGCCGGCAATTGGATGCTTGCAACTCTTATGTCGGTACCTGTGCGTATATGAGTCCAGAGAGGTTTGACCCGGATAAATATGGCGGTAATTACAATGGCTACGCGAGTGACATATGGAGCCTTGGGCTGACACTGTTAGAGCTCTACATGGGCCACTTTCCTTTGCTTCCTGCCGGTCAGAGGCCGGATTGGGCTACTCTGATGTGTGCTATCTGCTTTGGGGAGCAGCCGGCGTTGCCCGATGGTGTCTCGGACGAGTTTCGGAGTTTTGTTGAGTGTTGCTTGCAGAAGGATTCTTGCAAAAGATGGTCGGCTGCACAACTTCTGTCGCACCCTTTTGTGAGCAAAGGTCAGACAGCAGATGACTGCGGCCTTGAATAG 975 52.31 MAVVRERRQLNLRLPDLSDRRPCFPLSLPPCSTTAATTTTSSNTAISTSDLEKLQVLGHGNGGTVYKVRHKRTSMIYALKVIHGDCDPDVRRQVFREMEILRRTDSPWVVRCQAFFEKPSSDIAILMEYMDLGSLDSLMKTQKTLSEHTLAHVARQVLNGLSYLHSHKIIHRDIKPSNLLVNQKMEVKIADFGVSKIMCRQLDACNSYVGTCAYMSPERFDPDKYGGNYNGYASDIWSLGLTLLELYMGHFPLLPAGQRPDWATLMCAICFGEQPALPDGVSDEFRSFVECCLQKDSCKRWSAAQLLSHPFVSKGQTADDCGLE 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33145279 33146533 + Conep02aG0175100.1 Cone2ag0738 433205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0738 324 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 37 315 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone2ag0738 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 Pfam Protein kinase domain 52 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 PIRSF ILK 26 309 - -
Cone2ag0738 324 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524(InterPro)
Cone2ag0738 324 Gene3D Phosphorylase Kinase; domain 1 31 131 - -
Cone2ag0738 324 FunFam Mitogen-activated protein kinase kinase 27 127 - -
Cone2ag0738 324 FunFam Mitogen-activated protein kinase 2 132 322 - -
Cone2ag0738 324 PRINTS Tyrosine kinase catalytic domain signature 163 181 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 PRINTS Tyrosine kinase catalytic domain signature 127 140 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 PRINTS Tyrosine kinase catalytic domain signature 234 256 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 SMART serkin_6 51 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 SUPERFAMILY Protein kinase-like (PK-like) 48 315 IPR011009 -
Cone2ag0738 324 ProSiteProfiles Protein kinase domain profile. 51 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0738 324 CDD PKc_MAPKK_plant_like 50 316 - -
Cone2ag0738 324 Gene3D Transferase(Phosphotransferase) domain 1 133 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0478 Cone-Chr12:3105733 Cone2ag0738 Cone-Chr2:33145279 3.61E-96 dispersed
Cone17ag0025 Cone-Chr17:183156 Cone2ag0738 Cone-Chr2:33145279 4.15E-97 dispersed
Cone2ag0738 Cone-Chr2:33145279 Cone7ag0824 Cone-Chr7:6143218 1.29E-97 dispersed
Cone2ag0738 Cone-Chr2:33145279 Cone20ag1378 Cone-Chr20:8798189 1.87E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82623 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0738 K20604 - csv:101203133 526.554