Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0776 ATGGTCTTCAAGGGAAGGTTCTTCTCCTCGAAGAAATCTGGCTCCTCTAGCCCTGATGGCTCCAACAGTCCTCGCTCTCTTGGCTCCAACTCTCCTGTCAGATCCGACAAGAAGAAACCTAAATCGGCCTCCAAAGAAGAGCCGCCGCGGGTCGGGAAAGCAAACACTGCTGCCGCCGGAACGTTTAGAAGTGACAGTTTGAAGGATGGTGTGAAGAAGGAAGTTAAAGGAAAAGATAGTTCAAATTCCGCGAGATTTCAGTCGCCGGCGACGGTGAGCTCGCCTGCAGTTGGTTCAAGTTCGGCGTCCAAGGCTAAGAAGGCGGTTGGAGATGTTAATGACTTGCCCTCGTCTGTGTCGCCGATTGTTGCATCGTCACTTGGATTGAATAGGATAAAGACCAGATCAGGACCGTTGCCGCAGGAGAGTTTTTTCAGCTTCAAGGGTGATAAGGGGATGAGTAATCTTTCTAAGCCGGGGGGTGATGGGAGTTCAGGTTCGGGCGGGTCAGTTTCAGGTAGTGGAGGGAAGAAGAAAGAGGTTCTCAATCAGAGCAGAAAGGGTATTCGGGATAATGTTAGTAATTCAGATGGTATGTCGATAGGGAGTGCACAGTCGAGAGAAGAGAGTCCGAATGTGCTGTCACGGTCTCGGCTACATAATGCTGAATCTTCCTCCGAAGCAGGCCGACGTGAACCATCATGGGATTGCTCTGGAAGTTTAAGAGATTCAGATATTTGTACACCCGAGAATACGTTTGATTTTGAAAATCCAAAAGAATCTGAATCTCCCCGTTTTAAAGCTATACTCCGTGTCACTAGTGCTCCTAGAAGGAAAAATCCTGCTGATATCAAAAGTTTCTCCCATGAATTAAATTCCAAGGGTGTTCGACCGTTTCCATTTTGGAAGCCTCGAGGACTAAACAACTTGGAGGAAACCTTGGTTGTTGTACGGGCAAAGTTTGACAAAGCAAAGGAAGAAGTAAATGCTGATCTGGCTATTTTTGCAGCAGATTTGGTTGGTATTCTGGAAAAAGATGCGGATACTCACCCTGAGTGGCAGGAGCCTCTTGAGGACTTGTTGGTTTTGGCTCGAAATTGTGCTATGACGACTCCTGGGGAATTTTGGCTCCAGTGTGAAGGCATTGTCCAGGAATTGGATGATAGGCGCCAAGAACTTCCTCCTGGCATGTTGAAGCAGCTTCATACCCGAATGCTTTTCATTCTCACGAGATGTACACGATTATTGCAGTTCCACAAAGAATTTGATGAAGGTGAACCTATTTATCAGCTTCGTCAATCTAGAGTCCTGTACTCTGCAGATAAAGGAATTCCTTCAGGACCACCAAGGGATGTCAAAAGTGCTAGTGCTGCTAAGGCCTCAAAGGCAGCTTCAGTCAGGAAATCTTATAGTCAGGAACAGCGTGCATTGAATTGGAGTAGAGAACAAGATAAACAGCCAGGGAAACTTGTCCCACCTGCTGCTGATGACACATCGGCGAATGTAGATTCTCCTGGTAGGGACAGGATGGCTTCATGGAAGAAACTCCCTTCTCCGGCACTGAAAAGCATGAAACAAGCTACTGTGACAAAGGATCAAAATAATGATAATGTTAACCCCAAAAAGGTGTCAAAGAACAGGAGAGGAGCTTTTGAAGGGAGCTTGACTACTGCTAAAACTTCAGAGCTTCCTCCTGTAAAAGATTCCAATGAACATACTTCCAAACACCAGCATAAAGTTTCTTGGGGCTACTGGGGAGATCATCCGACTATTTCTGATGAGAGTTCAATTATTTGTCGCATTTGTGAGGAAGAGGTTCCAACATCTCATGTGGAAGATCATTCAAAAATTTGTGCAGTAGCTGATCGATGTGATCAGAAGGGTGTAAGTGTTGATGAGCGTCTTCTAAGGATTGCAGAAGCTCTTGAGAAGATGATGGAATCTGCTCAACAGAAGGATGGCCAACATGGAGGATATCCTGAGGCTGCAAAAGGTTCAAGCTCTAGTATGATTGAAGACTTTGATGCTTTCTCTCCAAAGCTAAGTGATTGTTCCCGTAGAGGTTCTGAGGACATGCTTGATTGCTTCCCTGAGACAGATAACTCCTCCTTCATGGATGACTTGAAGGGCTTCCCTTCCATGTCCTGCAAAACTCGGTTTGGTCCAAAATCTGATCAGGGTATGACAACTTCATCTGCGGGTAGCATGACTCCTAGGTCTCCGTTATTGACTCCAAGAACCAGTCAGATTGACTTGCTCTTGTCGGGGAAGGGCGCATACTCCGAGCATGATGATCTTCCCCAGATGAACGAGCTTGCTGATATTGCAAGATGTGTGGCAAATATGCCTTTGGATGACGATCGCTCCATTCCATATCTACTATCTTGTCTTGAGGACTTAAGGGCCGTCATTGACAGTCGGAAGTTTGATGCACTTACTGTTGAAACTTTTGGAACGCGCATTGAGAAGCTAATTCGGGAGAAATATTTGCAGCTTTGTGAGCTGGTTGAGGATGAAAAAATGGATATATCAAGTACTGTCATTGATGAAGACACTCCTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGTCCTGTACATTCCTCTAAGGACCGTACTTCAATAGATGACTTTGAGATTATAAAACCAATCAGTCGTGGGGCATTTGGTCGGGTTTTCTTGGCTAAAAAGAGAACAACAGGGGACCTTTTTGCAATAAAGGTTCTGAAGAAGGCAGATATGATTCGGAAGAATGCTGTTGAGAGTATACTTGCAGAACGCGATATTCTAATTTCAGTTCGAAATCCTTTTGTGGTGCGGTTCTTCTATTCTTTTACATGCCGTGAGAACCTGTATCTTGTGATGGAGTATTTGAATGGAGGAGATCTCTACTCATTGTTGAGAAATTTAGGATGTCTAGATGAAGATGTTGCTCGTGTATATATAGCAGAAGTTGTGCTTGCATTGGAGTATTTGCATTCTCTCAATGTAGTTCATCGTGATTTGAAGCCTGACAATTTGTTAATTGCACATGATGGTCATCTTAAGTTGTCAGATTTTGGGCTCTCTAAGGTTGGTCTTCTTAACAGCACTGATGATTTGTCAGCACCAGCAGTCAGTGGGACCTCCCTCTTTGGGGAAGATGAACCTCCAGTATCTATGTCCGAGCATCAGCAAGAAAGGAGGAAGAAACGTTCTGCTGTGGGCACACCTGACTATCTGGCACCTGAAATACTTTTGGGAACTGGACATGGTGCCACTGCTGATTGGTGGTCTGTAGGTGTCATTTTGTTTGAACTGATTGTTGGCATCCCGCCTTTCAATGCTGAACATCCCCAGACAATATTTGATAATATTCTCAATCGTAAAATACCTTGGCCTCGGGCACCTGAAGAAATGAGCTTTGAAGCACAGGATTTAATTGATCGATTGTTGACTGAAGATCCTCATCAGAGACTCGGTGCTAGGGGAGCATCAGAGGTGAAGCAGCATATTTTCTTTAAAGATATCAACTGGGACACACTAGCCAGACAAAAGGCCGCATTTGTACCAACCTCAGAAAGTGCACTAGATACCAGTTATTTTACAAGTCGCTACACATGGAATAATGATGATGTTTATCCAGCGAGCGATATTGAGGATTCAAGTGATGCTGACAGTTTAAGTGGAAGTAGTTGTTTGAGCAATCGCCAAGAAGAAGTGGGAGATGAATGTGGGGGTCTCACTGAGTTCGAGCCTGGCTCATCTATCAATTACTCTTTTAGTAATTTCTCATTCAAGAATCTGTCCCAGCTTGTATCAATCAACTATGATCTGCTCTCCAAGGGCTGGAAGGATGATGATCCATCAAATCCTAATACATAA 3867 44.53 MVFKGRFFSSKKSGSSSPDGSNSPRSLGSNSPVRSDKKKPKSASKEEPPRVGKANTAAAGTFRSDSLKDGVKKEVKGKDSSNSARFQSPATVSSPAVGSSSASKAKKAVGDVNDLPSSVSPIVASSLGLNRIKTRSGPLPQESFFSFKGDKGMSNLSKPGGDGSSGSGGSVSGSGGKKKEVLNQSRKGIRDNVSNSDGMSIGSAQSREESPNVLSRSRLHNAESSSEAGRREPSWDCSGSLRDSDICTPENTFDFENPKESESPRFKAILRVTSAPRRKNPADIKSFSHELNSKGVRPFPFWKPRGLNNLEETLVVVRAKFDKAKEEVNADLAIFAADLVGILEKDADTHPEWQEPLEDLLVLARNCAMTTPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKEFDEGEPIYQLRQSRVLYSADKGIPSGPPRDVKSASAAKASKAASVRKSYSQEQRALNWSREQDKQPGKLVPPAADDTSANVDSPGRDRMASWKKLPSPALKSMKQATVTKDQNNDNVNPKKVSKNRRGAFEGSLTTAKTSELPPVKDSNEHTSKHQHKVSWGYWGDHPTISDESSIICRICEEEVPTSHVEDHSKICAVADRCDQKGVSVDERLLRIAEALEKMMESAQQKDGQHGGYPEAAKGSSSSMIEDFDAFSPKLSDCSRRGSEDMLDCFPETDNSSFMDDLKGFPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLSGKGAYSEHDDLPQMNELADIARCVANMPLDDDRSIPYLLSCLEDLRAVIDSRKFDALTVETFGTRIEKLIREKYLQLCELVEDEKMDISSTVIDEDTPLEDDVVRSLRTSPVHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLNVVHRDLKPDNLLIAHDGHLKLSDFGLSKVGLLNSTDDLSAPAVSGTSLFGEDEPPVSMSEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGVILFELIVGIPPFNAEHPQTIFDNILNRKIPWPRAPEEMSFEAQDLIDRLLTEDPHQRLGARGASEVKQHIFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYTWNNDDVYPASDIEDSSDADSLSGSSCLSNRQEEVGDECGGLTEFEPGSSINYSFSNFSFKNLSQLVSINYDLLSKGWKDDDPSNPNT 1288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33726449 33741896 + Conep02aG0180300.1 Cone2ag0776 433243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0776 1288 ProSiteProfiles AGC-kinase C-terminal domain profile. 1169 1270 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0776 1288 SMART serkin_6 879 1168 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 1054 1068 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 32 48 - -
Cone2ag0776 1288 PANTHER SERINE/THREONINE-PROTEIN KINASE 585 1262 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone2ag0776 1288 Pfam Protein kinase domain 880 1168 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 441 554 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 66 80 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 158 172 - -
Cone2ag0776 1288 Gene3D Phosphorylase Kinase; domain 1 877 1197 - -
Cone2ag0776 1288 Coils Coil 632 652 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 9 31 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 720 742 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 1211 1230 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 81 101 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 1216 1230 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 118 141 - -
Cone2ag0776 1288 Coils Coil 307 327 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 523 540 - -
Cone2ag0776 1288 CDD STKc_MAST_like 885 1173 - -
Cone2ag0776 1288 Gene3D Transferase(Phosphotransferase) domain 1 963 1186 - -
Cone2ag0776 1288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0776 1288 SUPERFAMILY Protein kinase-like (PK-like) 876 1211 IPR011009 -
Cone2ag0776 1288 FunFam probable serine/threonine protein kinase IREH1 877 966 - -
Cone2ag0776 1288 ProSiteProfiles Protein kinase domain profile. 879 1168 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 1040 1068 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 187 222 - -
Cone2ag0776 1288 MobiDBLite consensus disorder prediction 1 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1459 Cone-Chr19:9471323 Cone2ag0776 Cone-Chr2:33726449 6.94E-65 dispersed
Cone1ag0723 Cone-Chr1:6683988 Cone2ag0776 Cone-Chr2:33726449 8.10E-30 dispersed
Cone2ag0776 Cone-Chr2:33726449 Cone5ag1534 Cone-Chr5:10521986 1.29E-77 dispersed
Cone5ag1226 Cone-Chr5:5645208 Cone2ag0776 Cone-Chr2:33726449 1.09E-30 dispersed
Cone1ag0068 Cone-Chr1:340368 Cone2ag0776 Cone-Chr2:33726449 1.96E-50 wgd
Cone13ag0901 Cone-Chr13:7955235 Cone2ag0776 Cone-Chr2:33726449 1.71E-28 wgd
Cone16ag0254 Cone-Chr16:2793920 Cone2ag0776 Cone-Chr2:33726449 0 wgd
Cone19ag0899 Cone-Chr19:7013667 Cone2ag0776 Cone-Chr2:33726449 2.97E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82625 PF07724 AAA_2 6.40E-07 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0776 K08789 - rcu:8280394 1842.01