Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0777 ATGGCGGAACTCTTAAAGCAAAATCAAAAGCATTTCCTTCCCATTTTACTTCTCATCTTCCTCGCCATCCTCCCCAATGCAAAACCCGATCTTGCTTCCGACAAGGCGGCACTACTCTCCCTCCGGTCCGCTGTCGGCGGCCGCACTCTCCTTTGGAACGTAACAGAGCAAAGCCCCTGTTCATGGGTCGGAGTCGTTTGCGAGTCAGGCCGGGTCACAGTGCTCCGTTTACCCGGAGTTTCACTCTCCGGTCAAATACCCGCGGGAATATTCGGTAACTTGACCCGTTTACGTACTCTCAGCCTCCGCCTCAACGCCTTGATCGGTGAGCTCCCTTCAGATTTGGCCGCTTGTACTAATCTACGCAACCTTTATTTACAAGGCAATGGATTTAGTAGCGAAATCCCTTCATTCTTATTTCAGTTCCATAATCTTGTTCGTCTTAACTTAGCCTTTAACAATTTTTCCGGAGAAATCTCGCCGGATTTTAACAATCTGAATCGATTAGGCACTCTGTTTCTTCAGAACAATCAGCTTACTGGGTCTATACCGGATTTAAAGCTTCCTAATCTTGTCCAACTCAATGTATCTAATAATTTACTAACTGGGTCTGTTCCATTAAGCTTGAAATCCTTTTCTTCGAGTGCTTTTGAGGGTAACTCGCTCTGTGGAAGCCCTCTTGCTACTTGTTCTGAAGATTTGACCGTTCCGGCAACCGGAGCCACTGGAATCGGTGGGCCTGGGAAGAAGAAGTTGTCTGGAGGTGCCATTGCAGGGATTGTGATTGGATCTGTGCTTGGTTTTGTTTTGATTCTCTTACTTTTATTGCTTTTTTTCCGAAAAAGGAGTTCTAAGAAAACAAGCTCTGTTAATAATAATGATGCGGTTAAGAACCGGGAAGTTGAAATCGGAGGTTCAAAACCCGGCGGAGAGTTCGAAAATGGTGGATTTGGTAATGGGGTTCCCGTTGGTGCTCCAGCGGCTGTTGCAGCGTCAGCGGTGGTGGGGAATGGAGCAGGCGAAGAGAGTGGTGGGGCCGGGGTAAAGAAGTTGATGTTTTTCAGGAATTTTGGGAAGGTGTTTGATTTGGAGGATTTGTTGAGAGCTTCGGCTGAGGTGTTGGGGAAAGGGACATTTGGGACAGCGTATAAGGCGGTTTTGGAGGTGGGGATTGTGGTGGCGGTTAAGAGGTTGAAGGACGTGACACTTTCCGATAAGGAGTTTAGGGAGAAGATTGAACAGGTTGGAGTAATGGATCATAAGAATTTGGTACCTCTTAGGGCTTATTACTATAGTTCTGATGAGAAGCTTCTTGTCTTTGATTACATGCCCATGGGCAGCCTATCTGCCCTTCTGCACGGAAACAAAGGGGCTGGGCGGACCCCACTGAATTGGGAAATCCGGTCTGGCATTGCCCTTGGAGCAGCCCATGGAATTGAGTACCTCCATTCTCAAGGCCCAAACGTCTCACATGGAAACATAAAATCATCCAACATCCTCCTAACAAACTCCTACGATGCTCGAGTCTCCGATTTTGGGCTGGCTCATCTCGTGGGTCCATCCTCCACTCCCAACCGAGTGGCGGGCTATCGGGCCCCAGAGGTGACCGACCCACGAAAGGTCTCCCAGAAGGCAGATGTTTATAGCTTCGGTGTATTACTCTTAGAGCTTTTGACTGGAAAAGCTCCAACCCATTCCCTTTTAAATGAAGAAGGGGTTGATTTGCCCAGATGGGTTCAATCTGTTGTTCGAGAAGAGTGGACTTCTGAGGTTTTTGATCTTGAGCTATTAAGGTATCAAAATGTTGAGGAGAAGATGGTTCAGTTATTGCAACTTGCCGTGGACTGTTCGGCCCAATATCCCGATAAGAGGCCCACTATGTCTGAGGTTACGAGAAGGATTGAAGAGATATCGAGATCAAGCCACCTTGAAGACCGAGACCCGCCGATGGATATCGTCAATGAGTTATCTTCTCAGTGA 1980 47.68 MAELLKQNQKHFLPILLLIFLAILPNAKPDLASDKAALLSLRSAVGGRTLLWNVTEQSPCSWVGVVCESGRVTVLRLPGVSLSGQIPAGIFGNLTRLRTLSLRLNALIGELPSDLAACTNLRNLYLQGNGFSSEIPSFLFQFHNLVRLNLAFNNFSGEISPDFNNLNRLGTLFLQNNQLTGSIPDLKLPNLVQLNVSNNLLTGSVPLSLKSFSSSAFEGNSLCGSPLATCSEDLTVPATGATGIGGPGKKKLSGGAIAGIVIGSVLGFVLILLLLLLFFRKRSSKKTSSVNNNDAVKNREVEIGGSKPGGEFENGGFGNGVPVGAPAAVAASAVVGNGAGEESGGAGVKKLMFFRNFGKVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGIVVAVKRLKDVTLSDKEFREKIEQVGVMDHKNLVPLRAYYYSSDEKLLVFDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAAHGIEYLHSQGPNVSHGNIKSSNILLTNSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEKMVQLLQLAVDCSAQYPDKRPTMSEVTRRIEEISRSSHLEDRDPPMDIVNELSSQ 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33756899 33759781 - Conep02aG0180400.1 Cone2ag0777 433244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0777 659 Gene3D Ribonuclease Inhibitor 33 142 IPR032675 -
Cone2ag0777 659 SUPERFAMILY Protein kinase-like (PK-like) 372 638 IPR011009 -
Cone2ag0777 659 Gene3D Phosphorylase Kinase; domain 1 342 442 - -
Cone2ag0777 659 Gene3D Transferase(Phosphotransferase) domain 1 443 653 - -
Cone2ag0777 659 Pfam Leucine Rich Repeat 120 140 IPR001611 GO:0005515(InterPro)
Cone2ag0777 659 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515(InterPro)
Cone2ag0777 659 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515(InterPro)
Cone2ag0777 659 FunFam Probable inactive receptor kinase RLK902 31 187 - -
Cone2ag0777 659 ProSiteProfiles Protein kinase domain profile. 368 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0777 659 FunFam pollen receptor-like kinase 1 337 442 - -
Cone2ag0777 659 SMART serkin_6 368 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0777 659 FunFam Probable inactive receptor kinase At1g48480 443 646 - -
Cone2ag0777 659 Gene3D Ribonuclease Inhibitor 144 230 IPR032675 -
Cone2ag0777 659 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Cone2ag0777 659 CDD STKc_IRAK 374 637 - -
Cone2ag0777 659 PANTHER OS05G0588300 PROTEIN 15 644 IPR050994 -
Cone2ag0777 659 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
Cone2ag0777 659 Pfam Protein kinase domain 372 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0777 659 SUPERFAMILY L domain-like 50 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0338 Cone-Chr13:2885015 Cone2ag0777 Cone-Chr2:33756899 8.77E-247 dispersed
Cone18ag1215 Cone-Chr18:8658053 Cone2ag0777 Cone-Chr2:33756899 2.50E-188 dispersed
Cone2ag0777 Cone-Chr2:33756899 Cone3ag0485 Cone-Chr3:2368876 5.20E-127 dispersed
Cone7ag0778 Cone-Chr7:4973041 Cone2ag0777 Cone-Chr2:33756899 2.54E-40 transposed
Cone16ag0255 Cone-Chr16:2817920 Cone2ag0777 Cone-Chr2:33756899 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82626 PF07724 AAA_2 6.40E-07 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0777 - - - 0.0