Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0786 ATGCCTGCTCATTCTGCCCCTCACGTCCTACTTTACCCTTACCTCTCTTCAGGCCACGTCATCCCACTTCTCGATCTCGCCCACTGTTTACTCACCCGCGGCCTTACCGTCACTGTTTTGATCACGCCCAACAACCTCCCTCTCCTCCAACAACTCCTCTCTCTCCACGGGCCCTCAATCCAACCGTTGATTCTCCCTTCCCCTAAGATCGACTCTTCGAAAAACTTTCTCACCTCTAGCCTCCAATCAATGAAACAGGAGTACTATCCTCACCTGCTGCAGTGGTTTCAGTCCCATCCCTCACCCCCTGTCGCTATAATTTCCGATATCTTCTTGGGCTGGACCCACCATCTTGCTTCTCAGGTCGGTATACGACGTGTTGTCTTCTCCCCGTCTGCAGCTTTTGATTTGTCGGTTTGTTACTCTACGTGGCGTGATTTGCCAAAGGTTGATGATCCCAACGATGTGAACTCCGTCGTGTCGTTCCCTACCCTACCGAATTCCCCGATTTACCCTTGGTGGCAGATGCCTCATCATTATAGAGACGGTATGGAAGGAGATTCAGACTGGGAATTTCTCAGAGAAAGCTGGTTGGAGAATTTGGCAAGTTGGGGAGTCGTGTTCAACTCGTTTACTGAGTTGGAACGAGTTTACTTTGACCACTTAAAGAAGGAACTGGGTCATGATCGTGTGTGGGCAGTAGGACCATTATTACCACAGACAGACGTTGACGTAGCGGGTCGGGGCGGGTCGAGTACAGTACCGCATCACGAGATGATGAGGTGGCTTGACAGACATCCCGACCATTCAGTGGTTTATATTTCCTTCGGAAGTCGAACCGTTCTGACACGTAAGCAGTTGGATGTGCTGGTCAAGGCTTTGGAGCAAAGTGGGGTCCGGTTTGTACTGTGCGTTTTGGCCCCGGACGAACGACATGTCGAACTCGGAAACGATATCGGCGTGATTCCTGATTGGTTCGAGGATCGTGTAGCTGGGAGAGGATTTGTGATCAAGGGGTGGGCCCCACAGGTGGCTATACTGAGGCACCGAGCCGTGGGTTCGTTTCTGACTCACGGTGGTTGGAACTCGGTTTTGGAAGGGCTTAGTGCAGGAGTCGTGATGTTGACGTGGCCGATGGGTGCGGACCAGTTTACAAATGCTAAGCTTTTGGTTGATCAGTTGGGTATTGGAATACGGGCTGGTGAGGGGACGGTGAATATTCCCGAGCCCAATGAACTGACCCAAGTTTTGATAAACTCCCTGGACCAAAACAGGCCGGAAAGGGCTCGGGCGAAAGAGCTAAGTCACGCAGCTCAAAACGCCACCGTCAAAGGTGGAAGCTCCGACGGAGATTTGGACCGTTTGGTTAAACAATTGACCGAGCTTCAACAAGGAAAATAG 1401 51.53 MPAHSAPHVLLYPYLSSGHVIPLLDLAHCLLTRGLTVTVLITPNNLPLLQQLLSLHGPSIQPLILPSPKIDSSKNFLTSSLQSMKQEYYPHLLQWFQSHPSPPVAIISDIFLGWTHHLASQVGIRRVVFSPSAAFDLSVCYSTWRDLPKVDDPNDVNSVVSFPTLPNSPIYPWWQMPHHYRDGMEGDSDWEFLRESWLENLASWGVVFNSFTELERVYFDHLKKELGHDRVWAVGPLLPQTDVDVAGRGGSSTVPHHEMMRWLDRHPDHSVVYISFGSRTVLTRKQLDVLVKALEQSGVRFVLCVLAPDERHVELGNDIGVIPDWFEDRVAGRGFVIKGWAPQVAILRHRAVGSFLTHGGWNSVLEGLSAGVVMLTWPMGADQFTNAKLLVDQLGIGIRAGEGTVNIPEPNELTQVLINSLDQNRPERARAKELSHAAQNATVKGGSSDGDLDRLVKQLTELQQGK 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33846130 33847854 - Conep02aG0181300.1 Cone2ag0786 433253

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0786 466 Gene3D Glycogen Phosphorylase B; 2 261 - -
Cone2ag0786 466 Gene3D Glycogen Phosphorylase B; 262 443 - -
Cone2ag0786 466 MobiDBLite consensus disorder prediction 431 451 - -
Cone2ag0786 466 FunFam Glycosyltransferase 251 440 - -
Cone2ag0786 466 CDD GT1_Gtf-like 7 438 IPR002213 GO:0008194(InterPro)
Cone2ag0786 466 PANTHER GLYCOSYLTRANSFERASE 7 460 - GO:0035251(PANTHER)
Cone2ag0786 466 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 460 - -
Cone2ag0786 466 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 245 393 IPR002213 GO:0008194(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0786 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0240 Cone-Chr16:2613327 Cone2ag0786 Cone-Chr2:33846130 1.17E-243 dispersed
Cone2ag0786 Cone-Chr2:33846130 Cone6ag0506 Cone-Chr6:2510083 2.20E-118 dispersed
Cone13ag0020 Cone-Chr13:124501 Cone2ag0786 Cone-Chr2:33846130 2.66E-158 wgd
Cone2ag0786 Cone-Chr2:33846130 Cone9ag0517 Cone-Chr9:2472760 1.06E-116 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g414 . . . Bda15g00639 Bpe12g00509 . . . . . . . . . . Cpe20g00278 . . . . . . . . . . . . . . . Cone2ag0786 . Cone13ag0020 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001996 2 4 1 3 1 3 2 3 3 1 1 3 2 1 3 1 3 5 2 3 1 1 3 1 2 3 2 1 2 3 66