Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0794 ATGTATGGTCAATCAAATTATCGCCCTCGATTCGCAAATGGTCCTAGAACACCTATGCCCCCAGCATATCAACAGCAGAATCAAGCGGGTCCGCCCCACCATACTCCTCATTTGCAACAACTTCCTCCTACTGCCCCACCTCAAGTTGGTCATCTCCAAGGTTACCACCATGGTCTTCCTGGCCCACCTCCTACTCAAGTACCACTCAATGGGTCGGCAAATATGAATCTATCTTATTCACAGACTCCACCCCGTCCTGTCCATGGGAATGCCCCATTGGCACAATTTTACTGGAATGCTCAACAGCCTTTGCATCCAGGGGCCCACAATGTTCACTATATACCATCATCTTTACCTCCTCCTCCTCCACCTCCACTTGGTACTACTCAACCGGAATTACTACGGCCCCCACATCCCACGAGAGTATTACCTTCTAACCAACCAACACAAAGACAAATGGTTCAGGCTCTACCTCATGCATGGACTCAACATGATACTATGTTGGCTCTTCAGCCTAGACCACCCCCTCCACCTCCCCTTCCTACTCAAATGGCTTTCATGGGCCCCACTCCACCACTACCCTCTTCTCCACTGTCACTTCCACCTCCACCACCAAATACTACTCCCCTGCCATCATCTTCAATGCCAATTCATGCTGATTCCATCTTGCCACGCCATTTTGACACTCCTTGCAGCTCTGAGAAGCCTTCTGGAAGTGAAACAGGTTCTTTAGAATCTGTTGTTGAAGTTAGAGCTCCTATTCAGGTTGGAAATAAATCACTTGTGTGTGATAATAATCTGAACAGGGACAGTGGTAGTAGTTTGATGATAGACCTTCCACAACCTCCAGCAAAGCCGAAAGAAGACATTGTTGAGAAAATTGAAGGTTTTTGCCGACTTATTGTAAACAGTGGCTCAATTATTGAAGAGAAGACGCTTCAAAATGAATACAACAATCCAGAGTTTGAATTTTTGTTTGGTGGTGAGCCAGGGAGTGAAGCTGAAATTGCCCATGAGTATTTCATATGGATGAAAAGGAAGTATATCTTTGCTTCTAAAAGGTATGAAACACAACCTGAGCTGACATCAAACCCTTTGGAAATTGTGGAATCCTCACAGCCTAAATCTGTGATGGTTTCAACTTTATTGAGCTCACCTATGGGCTCTGACATGGAGATGGAAGATGATATCACTATATCTGATAAAGATGGAGGTCCCTTAATTGAATCTTTGAACCTTGAGTTTGACTTAATACCCAAGGAGCATAACGTGAAAGAGAAGTTACAAGGACCTCAAAATTTGTTGGGGTGCAGCAAAGTCAAAGTCATCTTACATGGAAGTAGTTCTTGCACTGAGTCCTCAAAACCGGTTGATGTAGTTGAAGGACTAAAATTCACATTTGATGATGACCAATCTACCAGCAAAGCAGCATTTATAGTTCATACTTCAAAAAGTAATCCCCCTGGAGCTACTGAACCTGTTAACTCTAATAAATCTTCTGGTCGGGTTATCAAAAGTGGGAGCCCATTTAGACTCGTACAGGACTATGCTTCTGATGACAATTCAGAAAATTCTGATTGTCCCCACCTTAGAGTTGTTAGCCCTCCAACTGTCTCACCGTCTGTTAGAGCTTCTGTTACTTCAATTCATAGGGATCCCACAAGTAATATGATTACCAATATCAAATCACAGAGTCCATGCAGGAAAGTTGAGGGGCTGGGTCCACTTTCTGAAACATTCTTGCTTGATAACAGTCCTGCTTTTTTCCCAGATTCTGAAGAAGATATTAATAACCGAAGAAATCAAGTGTCTGATATTGGTGATGCTTCTCATAATGTGGGTTGTGTTTATGACAAGTCTGAGAAAGAACATGAGGGGAAGGAGAAGACGGAAATGGCCGTGTTGGAAACAGACGAATTTGGGAGACTTGTTAGAGAAGGTCGTATTGACAGTGACTCTGATGATTCGCGCTATACAAGGAGGCATAACAGAAGAGCCAGAAGCCGCAGCAGGAGGCGCAGCTGGAGTCGCAGCAGGAGTCGCAGCAGGAGTCGATCTCCGATTGACAGAAAGAAAAGGCGGAGAAGTCCATGGAGGAGGAGGGAGAGACGAAACCAATCTCGCAGTTGGTCTCCTAGGACCAGAAGCACAAGTAGGTCTCCCCCTATCAGGCGATCCAATGAGCTAAGCAGTGAGAGTACAAGACAAAGAGGAAAGAATCTGATTCGAGAATGCTTCGATTTTCGTCGAGGAAGGTGCTATAGGGGAGGTTCATGCCGCTATATGCACCATGAATCGGGCAAGAGTAGAGAATCAAGGCTTCAAAGAAACAAGGATCCATATAATACTGAAATTCACCCTTCTTCAAAGAATTCTACAACTAGTAGGAAAAGGAATCAGAAATATTCTTCGGAAGTACGGGATCTTCAAGGGGAAGACAAGAAGAGCCAAGAGATTCCAAAAGATGTTAACATTAATAGGAAAAAAGATTTTTCTGATGAAGTGAAAAATCCGAACAATAGTGCTGTTATGGCCAATGCTGTGAAGGTAAAGCATGCAGTTCAAGAAGAACCAGAGGTGGCTATAACTACTGCCCATGTTCTTCCCCTTAATGAGAGTAATCAAGAGATGATTGAATCTTCCGTATCTGATTTATCACCTGATATTATAGCAATGGAGAATGCGGATTTTATCAATAAAGAGAACATTATTTCACAAATACCCAGCTCTTCTGGAGCTGGTAGCTGTACAAATAAAAAGCTTCTCATACTTGATGTTAATGGGCTGCTTGTAGATTTTGTCCCTTATCTTCCTGATGGGTACAAACCAGACATTACAATATCAAGAAAATCAGTATTCAAGAGGCCCTTCTGTGATGATTTTATAAAGTTCTGCTTTGAAAGATTTGAGGTGGGAGTTTGGTCGTCAAGAACCAGAAACAATTTGGACATGGTGGTCGACTTTCTTATGAGAGATTCTAGGGACAGATTACTATTTTGCTGGGATCAATCCCATTGTACTAGGACAGGGTTTGTCACAGTTGAAAATAAAAATAAGCCACTATTTTTGAAGGAATTGAAGAAGTTATGGGAAAAGCTTGAGCCTAATCTTCCCTGGGAATATGGGGACTACAATGAAACAAATACATTGTTATTGGATGATACCCCATATAAGGCTTTACGCAATCCGGCTAACACGGCAATATTTCCCCATCCGTATCAATACACGGACAAAGATGATGTTTCTTTGGGACCAGGTGGTGCTCTTCGATCCTATTTGGAGGGTTTAGCTTTGTCAGAGAATGTTCAAAAATATGTCGAGGAGAATCCATTTGGTCAACTACCCATTACAGAATCAGATCCATCTATAATCCATTTAGTCAACTACCCATTACAGAATCAGATCCATCTTGGAATTCCTAACTCTACTTTGCCATGTCAGCCTTCTCATTATCTGCCTCCTCCTTTTCCTCTCCCCCATTCACAGGGAGAAACCACCATACAACTGCCACCACCACCACCACCACCACCACCACCACCACCACCACTGCCGATAGTATCCTTTCAATACCCATCTGCTCCGATCGAAAGCTTTCAATCTTATCAAGCTTCTGTTTCCAGTCAGAATAGTCAACTCTCTGTTCCTCCAACTTCCTCTTGGTCTTCCTTCCAATCTCAATCTTCACAGTTTCACCCAAATTATATTTCGCCAAGAAATTACTTTAATTCTCATTCTCTAAGGCATTATTCTTCAGATCAACCGACACATTCTCAGGTTGGTGGGTTATATCAGCATCAACAACCTTTCTTGCATGTGGATAATTTCAGGTCAAACCCTCTTCCACAAAGTCAACTGTTGGGAGACCCACAATCTATGCCATTTTCTTCTGGGGCAAATTTTCTTCCTGGTCAACATCTGAATTCATCATCTTCTTCCTCCCAGCTTAATAATCTTTATCCACAGCCTCAGATCCCACCATATGGTATTCAATACCCAATAGAAGGAGGTAGCATTCCCGGTCTACACGGAAAGTCTGTTTCTTCCACTCCTCAAATCCTTCCAGACCCACCTGAGAATTTTAGTGGGTCGCGAATTTCAACTCATCACAACCCTTATGCATCCACTTTTGATAAGCCTCTTATGGGAAGCTACAACTTAAGTTCTAATGAAGAGGGTCCACCAAGAGCTAATCTGGGGCAGCTGCCCATATCATCAGGTGGGGCCCAGTATGATCCACTCTTCGACAGCATCGAGCCATCTTCCACTTCGCTTATGAAATCATCATCTCATGGTCCTAACAATAACAGTCTTGAACAAACTAGCTTTTCAGGTAAGAGGCAAAATAAGATTGTTGGCTCTACTGCTTCTTCTCCGGAAAATGATGAATTTGGTGAGACAGCAGATGCAGATCAAGTGGGTGCTGTTGAGAATGAGAGTCCTAGTAGTAATAATCCAATAGGCGATGAGGTCAAGTCTTCTCCTGGAAATAAGAGTAAGAATAAGAAAAAAAAGAAGACCAAGTCTATGAAGCCGTTCAAGATTGCTGTTGCGGACTTTGTAAAGGAAGTGCTTAAGCCCTCTTGGAGACAAGGTAATATGAGCAAGGAAGCTTTTAAGACAATTGTAAAGAAGACTGTTGATAAGGTTTCTGGTGCTATGAGGAGCCACCATATTCCTCAGTCTCAGATGAAGATTGATCAATACATTGAGTCTTCTCAAAGAAAACTGACCAAACTTGTTATGGGATATGTTGATAAGTATGTCAAGATGTAG 4773 42.68 MYGQSNYRPRFANGPRTPMPPAYQQQNQAGPPHHTPHLQQLPPTAPPQVGHLQGYHHGLPGPPPTQVPLNGSANMNLSYSQTPPRPVHGNAPLAQFYWNAQQPLHPGAHNVHYIPSSLPPPPPPPLGTTQPELLRPPHPTRVLPSNQPTQRQMVQALPHAWTQHDTMLALQPRPPPPPPLPTQMAFMGPTPPLPSSPLSLPPPPPNTTPLPSSSMPIHADSILPRHFDTPCSSEKPSGSETGSLESVVEVRAPIQVGNKSLVCDNNLNRDSGSSLMIDLPQPPAKPKEDIVEKIEGFCRLIVNSGSIIEEKTLQNEYNNPEFEFLFGGEPGSEAEIAHEYFIWMKRKYIFASKRYETQPELTSNPLEIVESSQPKSVMVSTLLSSPMGSDMEMEDDITISDKDGGPLIESLNLEFDLIPKEHNVKEKLQGPQNLLGCSKVKVILHGSSSCTESSKPVDVVEGLKFTFDDDQSTSKAAFIVHTSKSNPPGATEPVNSNKSSGRVIKSGSPFRLVQDYASDDNSENSDCPHLRVVSPPTVSPSVRASVTSIHRDPTSNMITNIKSQSPCRKVEGLGPLSETFLLDNSPAFFPDSEEDINNRRNQVSDIGDASHNVGCVYDKSEKEHEGKEKTEMAVLETDEFGRLVREGRIDSDSDDSRYTRRHNRRARSRSRRRSWSRSRSRSRSRSPIDRKKRRRSPWRRRERRNQSRSWSPRTRSTSRSPPIRRSNELSSESTRQRGKNLIRECFDFRRGRCYRGGSCRYMHHESGKSRESRLQRNKDPYNTEIHPSSKNSTTSRKRNQKYSSEVRDLQGEDKKSQEIPKDVNINRKKDFSDEVKNPNNSAVMANAVKVKHAVQEEPEVAITTAHVLPLNESNQEMIESSVSDLSPDIIAMENADFINKENIISQIPSSSGAGSCTNKKLLILDVNGLLVDFVPYLPDGYKPDITISRKSVFKRPFCDDFIKFCFERFEVGVWSSRTRNNLDMVVDFLMRDSRDRLLFCWDQSHCTRTGFVTVENKNKPLFLKELKKLWEKLEPNLPWEYGDYNETNTLLLDDTPYKALRNPANTAIFPHPYQYTDKDDVSLGPGGALRSYLEGLALSENVQKYVEENPFGQLPITESDPSIIHLVNYPLQNQIHLGIPNSTLPCQPSHYLPPPFPLPHSQGETTIQLPPPPPPPPPPPPPLPIVSFQYPSAPIESFQSYQASVSSQNSQLSVPPTSSWSSFQSQSSQFHPNYISPRNYFNSHSLRHYSSDQPTHSQVGGLYQHQQPFLHVDNFRSNPLPQSQLLGDPQSMPFSSGANFLPGQHLNSSSSSSQLNNLYPQPQIPPYGIQYPIEGGSIPGLHGKSVSSTPQILPDPPENFSGSRISTHHNPYASTFDKPLMGSYNLSSNEEGPPRANLGQLPISSGGAQYDPLFDSIEPSSTSLMKSSSHGPNNNSLEQTSFSGKRQNKIVGSTASSPENDEFGETADADQVGAVENESPSSNNPIGDEVKSSPGNKSKNKKKKKTKSMKPFKIAVADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMRSHHIPQSQMKIDQYIESSQRKLTKLVMGYVDKYVKM 1590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33948510 33959395 + Conep02aG0182100.1 Cone2ag0794 433261

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1415 1461 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 185 212 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 756 780 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 68 85 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1148 1186 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 662 702 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 518 544 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 800 822 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 781 799 - -
Cone2ag0794 1590 Gene3D - 879 1111 IPR023214 -
Cone2ag0794 1590 FunFam Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 872 1112 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 482 505 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 185 211 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1 88 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 710 736 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 19 34 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1352 1373 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1380 1394 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 756 822 - -
Cone2ag0794 1590 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 690 1589 IPR052650 -
Cone2ag0794 1590 SUPERFAMILY HAD-like 917 1105 IPR036412 -
Cone2ag0794 1590 SUPERFAMILY Surp module (SWAP domain) 280 348 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Cone2ag0794 1590 Gene3D Surp module 289 349 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 649 737 - -
Cone2ag0794 1590 ProSiteProfiles Zinc finger C3H1-type profile. 739 766 IPR000571 GO:0046872(InterPro)
Cone2ag0794 1590 ProSiteProfiles FCP1 homology domain profile. 915 1096 IPR004274 -
Cone2ag0794 1590 ProSiteProfiles SURP motif repeat profile. 293 341 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Cone2ag0794 1590 SMART forpap2 918 1080 IPR004274 -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 482 504 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1352 1508 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1276 1321 - -
Cone2ag0794 1590 MobiDBLite consensus disorder prediction 1475 1493 - -
Cone2ag0794 1590 Pfam NLI interacting factor-like phosphatase 920 1102 IPR004274 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0794 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0794 Cone-Chr2:33948510 Cone6ag1290 Cone-Chr6:10334828 2.23E-08 dispersed
Cone11ag0363 Cone-Chr11:1786468 Cone2ag0794 Cone-Chr2:33948510 5.83E-87 transposed
Cone6ag1001 Cone-Chr6:5522930 Cone2ag0794 Cone-Chr2:33948510 1.45E-15 transposed
Cone16ag0215 Cone-Chr16:1460441 Cone2ag0794 Cone-Chr2:33948510 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g457 Blo04g00798 . . . . . . . . . . Cma11g00215 Car10g00275 Car11g00194 Sed12g2017 . Cpe04g01453 Bhi02g00087 Tan09g2029 Cmetu02g1493 . Hepe09g0282 . . . . . . . . . Cone2ag0794 Cone16ag0215 . . . . . . . . . Bda14g00888 . Bpe15g00571 . . . Cmo10g00311 Cmo11g00217 . . . . . . . . . . . . . . . . . . . . . Csa01g00305 Chy02g02433 Cme02g01821
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0029745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2