Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0800 ATGTCAGTCGGCAAAGCGAAGCTCCTCGTCAACTTCGGAGGCGAGTTCACTCGCCAACTCGGAAAACTCAGCTACGTCGGAGGCAAAACTCGGCTCGTACTGATCGAACGGTTCGTGAGCTTCGAGGCGCTTCGAACTAAGATGACTCAACTCAGCTCGACCTTGCCGAGTTGCTTGGAGATCAGGTTCCAGCTCCCGGACGAGAGCCTGGAGTCCCGGCTCGTCTCCGTCGAGTGCGACGACGACGTATTTGCGATGATGAGCGAGTTCGAGGCCTCGCAGAGAATTCCGGTGTATATATTTGATACTAGCGCCGGCTCGGTTCAGAGGAGTGCTGGTCCTGCTGTTCCCGGAGCAGTTCTTGATCATCCAATTTCTACTCATGGAGATAACGCGGTACTAATTGATCCACTTGAGTTTGCTGATGCTGAAGATGACTTAATTTCACTTCCTAGAGTTTCAGACGATCCTCAAACTTCAACCAATAGTCATGTAAGCCCAGCAACCTCTGATTTGGTCAGTGGAACAGAGCCCCTAGCTATAGGCCAGGAATTCCCCACTGCACAAGCTTTCCGTGATGTATTAATAGCTATAGCCATTTCCCTTAAGTTTGAGTTAACATTCATAAGATCAGACCGAGCAAGAGTAACTGCCAAATGTGCTGCAGATGGCTGCTCATGGAGAGTTCATGCATCAAAACTCCCTGACATTGAAGCATTCCGGATAAAGACCTTGAAGGGAGAGCATTCTTGTACTCGGCCAGAACTGTCTAGCCATAGACAAGCAAGTATGAAATGGATCTTAAGCTGTATATTGGATCGTGTGAGGGCGAATACTAGTTACAAACCAAAGGAGATTATGAGGGATATTGAGCAAGAATATGGGGTGATGATACCGTATTTGAAAGCTCATCGAGCTAAGGAGCGTGCCCTAGAACTGATTTATAAGATGCCGATAAAGGATATTGTTAGAAGTCAAGCTGAGGTTCCTGGTGCAGAAAATGTTGCTCATAATTATGTTTCAGATCAGCAGAGAAAGAGGGTCTTGAAAGGGAGTCCAGTGCATTGCAATCTGTGTAAAAGACAGGGGCATAATAGGAGGAGTTGCTTAAAGTTTGGCCAAAATGAGAGTCGGGCTGCTGGTGATCTGAGGAAGAATTTTCATTGCATGCTTTGCAAACAAAATGGGCATAATAGGAGGACTTGCCTACACAAGTATGCGAAGTTATAA 1230 46.67 MSVGKAKLLVNFGGEFTRQLGKLSYVGGKTRLVLIERFVSFEALRTKMTQLSSTLPSCLEIRFQLPDESLESRLVSVECDDDVFAMMSEFEASQRIPVYIFDTSAGSVQRSAGPAVPGAVLDHPISTHGDNAVLIDPLEFADAEDDLISLPRVSDDPQTSTNSHVSPATSDLVSGTEPLAIGQEFPTAQAFRDVLIAIAISLKFELTFIRSDRARVTAKCAADGCSWRVHASKLPDIEAFRIKTLKGEHSCTRPELSSHRQASMKWILSCILDRVRANTSYKPKEIMRDIEQEYGVMIPYLKAHRAKERALELIYKMPIKDIVRSQAEVPGAENVAHNYVSDQQRKRVLKGSPVHCNLCKRQGHNRRSCLKFGQNESRAAGDLRKNFHCMLCKQNGHNRRTCLHKYAKL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34015139 34018117 - Conep02aG0182800.1 Cone2ag0800 433267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0800 409 SMART PB1_new 18 103 IPR000270 GO:0005515(InterPro)
Cone2ag0800 409 Pfam MuDR family transposase 180 242 IPR004332 -
Cone2ag0800 409 Pfam PB1 domain 21 96 IPR000270 GO:0005515(InterPro)
Cone2ag0800 409 MobiDBLite consensus disorder prediction 153 171 - -
Cone2ag0800 409 MobiDBLite consensus disorder prediction 151 171 - -
Cone2ag0800 409 SUPERFAMILY CAD & PB1 domains 20 95 - -
Cone2ag0800 409 PANTHER POLYPROTEIN, PUTATIVE-RELATED 176 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0800 Cone-Chr2:34015139 Cone8ag1038 Cone-Chr8:9577075 6.90E-09 dispersed
Cone2ag0800 Cone-Chr2:34015139 Cone12ag1011 Cone-Chr12:8540219 3.86E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0800 - - - 0.0