Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0815 ATGGGGACGGAGAAGAGGCACCAGATGATGCAGAATCTGTTCGGTGATCAATCCGAAGAGGAGGAAGAAGTCGATTCAGAGCACGAGTCCAATCCACAGCCTAATTACGCCTCTGATGAAGGAGAAGGAGGCCTTGAACCGGAGGGTGAAGGTGAAATTGAGGGACATGGGGAAGTGGAAGTAGAGAGTGAAGGTGAGCTGCAAGATGCAGATCCTGATCCTCGGGAGAGTGAGGGTGAAAGAGATCAAAGTTCGCAGGAAGTAGATGTTGTTGATCAAAGAGAAGGAAGTGAAGGAAAAGAGACTGACAGTGATGAAAAATATGAGTACGGTCAGAGAGTAGCAGCTACTAGGAGACTTGATGTTGGTGAAAGTGAATCTGAGAGATCCCAGGAAAACCATTATCCTGAAAACGAAGATGAGGAGGTTGATCAGGCTAGAAGCCCAAGTAAATCACCAGGGGGAAATGATCAGATTCCCATTTCGAATTTGGTTCCTGAGATTCGTGATGTTTTTGGGGACTCTGATGATGAGGAAGAAACTGATTATGCAGTTCGGGATGATATGAAGCAAGATTCAAATAGATTCTTTATGGAGGAGGAAGGAAGTTATGAGAGGAGTCCAAGACCAGAGGATATTGTGGCTGATGATGATGATCGGTATGAATCTGAAGAGGAAAATGTCGAGGTGAAACACAAAGAAAAGCCGGTTGGGCCTCCTTTGGAGCTAGAGATTCCATTGCGTCTACCTCCTGCCCGTCCAGAGAAGATGAACATGATTAAAGTTTCTAATATTATGGGTATTGACCCCAAACCATTTGATCCTAAGACATATGTGGAAGAGGATACATATGTCACAGACGAATCTGGATCTAAGAAACGAATACGCTTGGAAAACAATATCGTACGCTGGAGGAATGTTAGGTATCCAAATGGCAAGACAACTTGTGAAAGCAATGCCCGCTTTGTGAGATGGTCAGATGGCAGTTTGCAGTTATTAATTGGGAATGAGGTTCTTGACATATCCATGCAAGATGCACAGCACGATCAAGCACACCTATTTCTAAGGCATGGAAAGGGAATACTTCAATCACAAGGAAGGCTTCTGAGGAAGATGAAGTTTATGCCATCATCCTTGACATCAAACTCTCATCGTCTGCTGACTGCTCTTGTTGAATCACGCCATAAGAAAGTTTTTAAAGTTAAGAACTGCATCACTGATATTGATCCTGAAAGAGAAAAGGAGGAAAAGGAAAAGGCTGAAAGTCAAACAATCAGAGCTAATGTGCTTCTTAATCGGAAGAGAGAAAAGGTGAGCCGAAAATATACACCTAGTGTGGACAGGAGACGACAGCTTTCACCTGGATTTTTGGAGGATGCTCTTGAGGAGGATGATGAAGCAGACTATTATGACCAACGTCGTTCAAACCGTCGCTTCGAAGAAGATCTGGAAGTGGAAGCCCGGGCAGAGAGACGCATAATGAATGCTAAGAAGTCACAAGGAGCTAGAGATATCCCTCGCAAATCATCCTTGACTGCTGGTAAATCATCTGCACGTCCAGTAGATTTCTCTGACAGCGAAAGAGAGGAGTCTGAATATGAAACTGATGGAGAAGAAGATGAGAGGTATTCTCGTAAAAGGGCTGAGGAGCAAGAGCCAGAGTATGAAGAAGATGAAGACGATGAACAGGAAGAAGAGGAGGCAGAAGTTAATGAAGTGTCTGAAGAGGGGGAAGAAGATGAGGAGCCAAAGCACAGGGCTAGAGATTCTGCAAGCAACCACAAGCGCAAGGGGATTGAATTGGATGAAGAATCTCCTCCAAGAAAGACAGCTACTCATCGCCGGATGCGAGTTATTGATGATAGTGACGAGGACTGA 1878 44.52 MGTEKRHQMMQNLFGDQSEEEEEVDSEHESNPQPNYASDEGEGGLEPEGEGEIEGHGEVEVESEGELQDADPDPRESEGERDQSSQEVDVVDQREGSEGKETDSDEKYEYGQRVAATRRLDVGESESERSQENHYPENEDEEVDQARSPSKSPGGNDQIPISNLVPEIRDVFGDSDDEEETDYAVRDDMKQDSNRFFMEEEGSYERSPRPEDIVADDDDRYESEEENVEVKHKEKPVGPPLELEIPLRLPPARPEKMNMIKVSNIMGIDPKPFDPKTYVEEDTYVTDESGSKKRIRLENNIVRWRNVRYPNGKTTCESNARFVRWSDGSLQLLIGNEVLDISMQDAQHDQAHLFLRHGKGILQSQGRLLRKMKFMPSSLTSNSHRLLTALVESRHKKVFKVKNCITDIDPEREKEEKEKAESQTIRANVLLNRKREKVSRKYTPSVDRRRQLSPGFLEDALEEDDEADYYDQRRSNRRFEEDLEVEARAERRIMNAKKSQGARDIPRKSSLTAGKSSARPVDFSDSEREESEYETDGEEDERYSRKRAEEQEPEYEEDEDDEQEEEEAEVNEVSEEGEEDEEPKHRARDSASNHKRKGIELDEESPPRKTATHRRMRVIDDSDED 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34168907 34175472 - Conep02aG0184300.1 Cone2ag0815 433282

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0815 625 MobiDBLite consensus disorder prediction 538 552 - -
Cone2ag0815 625 PANTHER LEO1 PROTEIN 58 621 IPR007149 GO:0005634(PANTHER)|GO:0006368(InterPro)|GO:0016593(InterPro)|GO:0032968(PANTHER)|GO:1990269(PANTHER)
Cone2ag0815 625 MobiDBLite consensus disorder prediction 184 216 - -
Cone2ag0815 625 Coils Coil 545 576 - -
Cone2ag0815 625 Pfam Leo1-like protein 259 418 IPR007149 GO:0006368(InterPro)|GO:0016593(InterPro)
Cone2ag0815 625 MobiDBLite consensus disorder prediction 49 147 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 436 457 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 436 473 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 1 221 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 553 578 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 493 625 - -
Cone2ag0815 625 MobiDBLite consensus disorder prediction 579 625 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0815 K15177 - - cit:102619104 811.986
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0199 Cone-Chr16:1312882 Cone2ag0815 Cone-Chr2:34168907 9.25E-304 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g641 . Blo16g00172 . . . Bpe13g00308 Bma06g00156 . Cmo13g01129 . . . . . . Cpe20g00067 . . . . . . . . . . . . . . . Cone2ag0815 Cone16ag0199 . . Lsi02g00109 . Chy12g01508 Cme12g01953 . . Bda11g01718 . . . . . Sed08g2112 . . Cma13g01081 . Car13g00918 . . . Bhi08g01102 Tan05g2374 Cmetu12g0892 . Hepe07g2474 . . Cla04g01164 Cam04g1222 Cec01g1733 Cco01g1779 Clacu04g1249 Cmu04g1228 Cre01g1524 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005345 1 2 1 1 1 1 2 1 1 0 1 1 2 1 1 2 1 2 2 1 0 1 1 1 1 1 1 5 2 2 40