Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0826 ATGGGGTGCGTGAGCTCAAAGCAGGCGGTGTCTGTAACGCCTGCGTACGATCACTCTGGTGTGATCAGGGAAAACGGGTCGAGTTTGGGGAATTCGGGTCGGAGCAGGGGAGATGGAGGAGGAGGGGAGGTGGTTGTGGTGGTGGAGGAGAAGAATGTGAAGGATAATAAGACAACGACGATGACGACGAAGGAGAAGAAGAAGAGTGTCATGGCGGCGATTGAGTTGGGAACTGGGTTTGGGACCGAGTTGGACGAGTCAGGGTTGGCGAGTTCGAACGGTATGGGTGAATCGTTGAGCTTTAGGTTGGGGAGTTTGCAGAGGTACGTGGAAGGTGCACACGTGGCTGCTGGCTGGCCAGCTTGGCTCAGCGCCGTGGCTGGTGAAGCCATTCACGGTTGGGTTCCTCTTCAGTCTGATTCTTATGAGAAGTTAGAAAAGATTGGGCAGGGTACATATAGCAGTGTGTTCCGAGCACTTGATCTGGAAACAGGGAAGATAGTTGCTCTAAAGAAGGTTCGGTTAGACAATTTTGAGCCAGAAAGTGTCAGGTTTATGGCACGAGAGATAACGATTCTCCGCAAACTAGACCACCAGAATGTTATCAAATTGGAAGGCTTAATTACTTCAAGACTATCATGTAGTTTATACTTGGTCTTTGAGTACATGGACCATGACATTGCCGGGCTATTATCTTGCCCTAAAATCAAGTTTACCGAATCACAAATCAAATGCTATATGAAGCAACTATTATCCGGACTTGAGCATTGTCATTCTAGAGGAGTAATGCATAGGGACATTAAAGGATCTAATCTTCTGGTCAATAATGAAGGGATATTGAAGTTGGGTGATTTTGGATTGGCCAATTTCAGTCATTTGGGGCAAAAACAACCTCTAACTAGCCGGGTCGTCACTTTATGGTACCGTCCACCTGAGCTCTTACTGGGGTCCACAGAATATGGAGCAGCTGTGGATCTTTGGAGTGTTGGTTGTGTCTTTGCTGAGTTGCTAGTCGGCAGACCTATTCTTCAAGGGAGAACAGAGGTTGAACAGCTACACAAGATTTTCAAGCTCTGTGGCTCTCCTCCTGATGAATACTGGAAAAAAACCCAACTTCCCCATGCAACTTTGTTCAGACCACAACATCCCTATGAAACTTGTCTTAGGGACACCTTTCGAGGTTTCCCTCCAGCCACAGTGGACCTTCTTGAAACTCTTCTTTCAATCGAACCTTACAATCGTGGGACTGCCTCCTCTGCTCTTGCGTCCGAGTACTTCAGTTCCAAGCCTAATGCTTGTGATCCTTCAAGCATCCCGATATACCCACCCAGTAAAGAGATTGATGCAAGAAACAGAGAGGAAGCTAGAAGGAGCAGGACTAAAATTAGTGGGAGGGTCTGTAGACCCGAAAAAAGAAAGGCAACCCGAAAATCCCTTGAAAGCAATAAATTGGCACCCTCAGAGATTCTGAGAAAATTAAATCCATCAAAGCACAAATTCTCAAAGTCAAAAAGCTCAGTAAAGGTGGAGAGGCTTCGTCAAAGTTATCAACTGATAATCTTGAAGATGCTATCCATGTAA 1581 46.3 MGCVSSKQAVSVTPAYDHSGVIRENGSSLGNSGRSRGDGGGGEVVVVVEEKNVKDNKTTTMTTKEKKKSVMAAIELGTGFGTELDESGLASSNGMGESLSFRLGSLQRYVEGAHVAAGWPAWLSAVAGEAIHGWVPLQSDSYEKLEKIGQGTYSSVFRALDLETGKIVALKKVRLDNFEPESVRFMAREITILRKLDHQNVIKLEGLITSRLSCSLYLVFEYMDHDIAGLLSCPKIKFTESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKLGDFGLANFSHLGQKQPLTSRVVTLWYRPPELLLGSTEYGAAVDLWSVGCVFAELLVGRPILQGRTEVEQLHKIFKLCGSPPDEYWKKTQLPHATLFRPQHPYETCLRDTFRGFPPATVDLLETLLSIEPYNRGTASSALASEYFSSKPNACDPSSIPIYPPSKEIDARNREEARRSRTKISGRVCRPEKRKATRKSLESNKLAPSEILRKLNPSKHKFSKSKSSVKVERLRQSYQLIILKMLSM 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34261546 34270281 + Conep02aG0185400.1 Cone2ag0826 433293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0826 526 FunFam probable serine/threonine-protein kinase At1g54610 225 465 - -
Cone2ag0826 526 Gene3D Phosphorylase Kinase; domain 1 129 224 - -
Cone2ag0826 526 Pfam Protein kinase domain 142 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0826 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0826 526 FunFam probable serine/threonine-protein kinase At1g54610 129 224 - -
Cone2ag0826 526 MobiDBLite consensus disorder prediction 448 481 - -
Cone2ag0826 526 MobiDBLite consensus disorder prediction 20 42 - -
Cone2ag0826 526 Gene3D Transferase(Phosphotransferase) domain 1 225 465 - -
Cone2ag0826 526 SUPERFAMILY Protein kinase-like (PK-like) 136 432 IPR011009 -
Cone2ag0826 526 SMART serkin_6 142 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0826 526 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524(InterPro)
Cone2ag0826 526 MobiDBLite consensus disorder prediction 448 479 - -
Cone2ag0826 526 PANTHER CELL DIVISION PROTEIN KINASE 141 426 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone2ag0826 526 CDD STKc_CDK9_like 142 426 - -
Cone2ag0826 526 ProSiteProfiles Protein kinase domain profile. 142 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0478 Cone-Chr16:6950291 Cone2ag0826 Cone-Chr2:34261546 4.60E-191 dispersed
Cone2ag0537 Cone-Chr2:2974503 Cone2ag0826 Cone-Chr2:34261546 7.44E-194 dispersed
Cone2ag0826 Cone-Chr2:34261546 Cone4ag0174 Cone-Chr4:812123 1.93E-183 dispersed
Cone16ag0190 Cone-Chr16:1233246 Cone2ag0826 Cone-Chr2:34261546 1.98E-300 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82629 PF01920 Prefoldin_2 1.10E-19 CL0200 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0826 - - - 0.0