Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0827 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATAGGCTACTCGAGATCTCTGAGAGGGTCTACGTGTTTGATTGCTGCTTCTCACCTGATGTGTTGGAAGAAGATGAATACAAAGTATACTTGGGTGGCATTGTACCGCAACTGCAGGCCTACTTTCCTGATGCTTCTTTCATGGTGTTTAATTTCAGAGAAGGGGAGAGACGGAGTCAAATTTCAGATATATTGACTGACTATGACATGACAGTTATGGATTATCCTCGGCAATATGAGGGATGTCCTCTCCTGCCTTTAGAGATGATCCACCACTTTCTTCGATCCAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTGTTAATGCATTGTGAAAGAGGGGGTTGGCCAGTCCTTGCATTCATGCTTGCTGGTCTATTATTGTACCGAAAACAGTACAGTGGGGAGCAAAAAACTCTTGAAATGATATACAAGCAAGCTCCACGAGAACTTTTACATCTTTTGTCTCCTTTAAATCCACAGCCTTCTCAGATGAGATATCTTCAGTATATCTCTAGGAGAAATTTAGGTTCCGCTTGGCCTCCATCTGATACACCTCTATTTTTTGATTGTTTGATACTTAGAGTCCTACCTCTTTTTGAAGGGGGACAAGGATGCAGACCTGTTATACGAATTTATGGTCAGGACCCCTTTACACCATCTAATAGAAGTTCAAAGCTTCTGTTTTCATCTTCAAAAACCAAAAAGCATATCCGCCACTATTTACAGGCAGAGTGTATGCTGGTGAAATTTGACATTCGTAGTCATGTTCAAGGGGATGTTGTTTTTGAATGCATCCATCTGGATGGAGATCTAGTACGAGAGGAGACGATATTCAGAGTTATGTTTCACACAGCTTTTGTGCAGTCAAATGTTCTGATGTTTAACCGTGATGACATTGATGTTTTATGGGATGCCAAGGATCAGTTTTCTAAGGATTTTAGAGTAGAGGTACTGTTTTTGGATGCTGATGCTGTTATCCCTAATCTCGCCAGAGTTGCAACGGATGATGATGGAAATGGGACAGAAAGTGCTTCGCCTGAGGAATTTTTCGAGGTGGAAGAGATCTTTGGTAGTGTTGTAGATGGACAAGAAGTCAAAGGGGTCTATGATCCTCGAATGGTTCTTGAAAGTGCTGCTAATGATATAGAACAAAAAGCGGCCAGGAAGGAGGATTTGGCTCCTCCTAAATTTCAAGACTGCACTTCTGCTGATGGGAATCAGAAGGAGTTGAAGGTGGACAATGACATTGACGATGCAGTGAAGGATATTACTGTGGATGATGTGAAGTACAAGCTGGAGGAGGACTCTGAACCAGATGCAGTTAAGGATATTATTGTGGACAATGGGGAAAACAAGTCAAATTTAGTTGCATCTGAATGGGGACATGTAAAAACTGAGAAAGTCATAGATGATTCTGATGGTATATTGTATGAAACAGAAGATAAAGGAAATGGGGAGGATAATTCTTCAGAGAAAATGTTGGAACCAAATGTTTCCCTGAAAAAGTCAAGTGCACAGAAATCTGAAAAATTGTCTTCACAGACGACAAAGAAACAGCCTACATCAACTGCAAAACCAGCAGCTGATTGGACTGTAACCAAGCAAAAGGCTAACCAGCAAGAAGTCCAGGGGTTTTCGGCAAAATTAGCCAAGCCAAATGCACCATCTAGGTGGATTCCCTCTAACAAAGGGTCTTACACAAACTCGATGCATGTTGCCTATCCACCGTCAAGATATAACAGTGCACCGGCTGTTCTTAGTAATGCTTCATTGAAAGATTCTAATTCAAACTCCAAAACAAAGTCTGCTGCCCGTGGACCTTTGGTTCCAGTTGACCCTGATAATGAGCAAAAAAGTCTGAAAGTGTGTTCTCCAATGAGGTCTTCAAATTCTGGACCAGTGCAAACTCCAGAACCACAAGTGCCACCAATCCAACAGAGTTTAATGCCAGCTCCAGCTCCACCGCCGCCCCCACCCCCTCCGGCCAACAATTCTTTATTTTATACCTCCCTCTTCAACTCCAAATCTTCTTCACCACCTTTCCCACCCTTGCAGGTAGATTCAGTGTCTCCTCCCCATCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCTTTTCTCTCATTTGGTCATGTGGCTTCCAAATATGCTGGTCCACCTTCGTCGCGATTCACCCCAATGCCATCGACATCATCTTTACCAGAAACTCTCATGTCACCCCATCCCCCTCCACCCCAACTTTCATCTAGCTGGCAGAATAATGGGAAAGTATTATCTCATCCACCCCCACCTCCATCTCTGCCCCCCCCACCACCACCACCATCACTGCTACCTCCACCCCACTCATCTCTCTTTGGTAATGCAATATCTACATCAGAACTAGTTAGAGTTGGAGTTCCTACACCACCCCCCCCTCCACCACCTCCTCCTATGCATGGGGTTCCAACTCTCCACTTCTCTTCAATGAAAGGCACTACAGCTGCTTCCATAAATGGAGCTCCACCGCCACCGCCACCGCCTCCACCACCACCATCTCCTTTTAGTGGAGCATCTTCACCGCCTTGTCCTCCACAACATGGATCTCCACCTCTGCTACCGACTCCTCCTCAATGTGGAACTCCAGCTCCGCCACCGCCTCCTCCTCAACATGGATCTCCAGCTCCGCCACCTCCTCCTTTATATAGAGGTCCTTCTCCACCATCACCTCCTCCACATATGCATGGAGGTCCACCTCCACCACCACCTCCTCCACCTTTGTATGGTGATCCACCTCCACCGCCGCCTCCACCTTTATATGGAGGTACACCTCCACCGCCTCCGGCTCCTTTTCGAGGAGGCCCACCTCCGGCACCACCTCCTCCTTCATATGGAGGTTCACCTCCACCACCACCACCACCACCACCACCACCACCCTCAAATGGAGGTCCACCTCCACCACCACCTCCTCCTTTTCGAGGAGGCCCACCTCCTCCACCGCCTCCTCCTTCTTATGGAGGCCCACCTCCACCACCGCCTCCTCCTTCCTATGGAGGTCCACCTCCACCATCGCCTCCTCCTTCGTATGGAGGTCCAACTTCTTTTCGTGGGGGTCCACCTCCACCACCTCCTCCTCCTTTGCATGGAGGTCCGCCTCCACCGCCACCTCCTCCAATGCGAGGAGCACCGCCTCCGCCACCGTCACCTCTAGGTCGTGGGGCTCCACCTCCTCCACCACCCCCCCGAAGTGGAGGTCCACCTCCCCCTCCCCCTGGACCTTGTGCTCTTGGACCGCCTGCTCCTCCTAGACCTCCAGCTGGCGTTGGTGCTCCTCCTCCGCCTCCTCCCCTGGGTGTTAAAGGAGCAAATGCTGCAGCTGCGGCAGGTAGAGGGCGTGGGCTTTCCCGTCCTTCAGGATTTGGAGCGGGTGTGACAGGGCCTCGAAAATCCTCTTTAAAACCTTTACATTGGAGCAAGGTCACTAGGGCATTGCAAGGAAGCTTATGGGAAGAATTGCAAAGATATGGAGAACCTCAAATTGCGCCAGAGTTTGATGTCACTGAGTTGGAAAGCCTTTTCTCTGCAAATGTCCCTAAACCTGCTGATTCAGGTGGTAAATCTGGAGGCCGAAGAAAGTCAGTTGGATCTAAAACTGATAAAGTCCAATTGGTTGACTTAAGAAGAGCAAACAACACTGAAATTATGCTTACAAAAGTTAAGATGCCCCTTCCTGATATGATGGCTGCAGTTCTTGCAATGGATGAGTCGGTATTAGATGTTGATCAAGTGGAAAATCTCATCAAGTTTTGTCCGACGAAGGACGAAATGGAGCTTCTCAAGGGATACACTGGTGACAAGGAAACCCTTGGAAAGTGCGAGCAGTTCTTTTTCGAGTTGATGAAAGTTCCTCGGGTGGAGTCAAAGTTAAGAGTATTTTCCTTCAAGATTCAGTTTGGTTCACAGATTTCAGAATTCAAAAAGAGTTTAAACATTGTTAACTCTGCCTGTGAAGAGGTTAGAAATTCAATCAAATTAAAGGAGATAATGAAGAAAATTTTATATTTGGGGAATACATTGAACCAAGGAACCGCAAGGGGTTCCGCAATTGGTTTCAAGTTAGATAGTCTCTTAAAACTCACTGATACACGAGCTTCTAACAGTAAGATGACGCTAATGCATTATCTTTGCAAGGTCCTTGCTTCTAAGACTCCAGCACTTCTCGATTTTCATCTGGACCTATGCAGCCTGGAATTTGCATCAAAGATACAATTGAAGTCCTTGGCAGAAGAAATGCAAGCAATAATTAAGGGACTAGAAAAGGTCAAGCAGGAGTTGGTTGCATCCGAAAGTGATGGCCCTGTCTCAGAAGTTTTCCGTAAGACTTTGAAAGAATTCATTACCGTTGCTGAAACAGAGGTGACGTTCGTAACAAATCTATATTCTGTGGTGGGTAGAAATGCGGATGCACTTGCACTATATTTTGGAGAGGATCCTGTCCGTTGCCCATTTGAGCAAGTCACGGGGACACTTCTGAATTTTGTGAGGATGTTCCGGAAAGCACACGAAGAGAATTGTAAACAAGCTGAATTGGATAAGAAGAAAGCGGAAAAGGAGGCTGAAATGGAGAAGGCCAAAGGCATTAACCTTACAAGCAAGAGTGCAAAATAG 4731 47.11 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYKVYLGGIVPQLQAYFPDASFMVFNFREGERRSQISDILTDYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMIYKQAPRELLHLLSPLNPQPSQMRYLQYISRRNLGSAWPPSDTPLFFDCLILRVLPLFEGGQGCRPVIRIYGQDPFTPSNRSSKLLFSSSKTKKHIRHYLQAECMLVKFDIRSHVQGDVVFECIHLDGDLVREETIFRVMFHTAFVQSNVLMFNRDDIDVLWDAKDQFSKDFRVEVLFLDADAVIPNLARVATDDDGNGTESASPEEFFEVEEIFGSVVDGQEVKGVYDPRMVLESAANDIEQKAARKEDLAPPKFQDCTSADGNQKELKVDNDIDDAVKDITVDDVKYKLEEDSEPDAVKDIIVDNGENKSNLVASEWGHVKTEKVIDDSDGILYETEDKGNGEDNSSEKMLEPNVSLKKSSAQKSEKLSSQTTKKQPTSTAKPAADWTVTKQKANQQEVQGFSAKLAKPNAPSRWIPSNKGSYTNSMHVAYPPSRYNSAPAVLSNASLKDSNSNSKTKSAARGPLVPVDPDNEQKSLKVCSPMRSSNSGPVQTPEPQVPPIQQSLMPAPAPPPPPPPPANNSLFYTSLFNSKSSSPPFPPLQVDSVSPPHPPPPPPPPPPPPPPPPPPPPPPPPFLSFGHVASKYAGPPSSRFTPMPSTSSLPETLMSPHPPPPQLSSSWQNNGKVLSHPPPPPSLPPPPPPPSLLPPPHSSLFGNAISTSELVRVGVPTPPPPPPPPPMHGVPTLHFSSMKGTTAASINGAPPPPPPPPPPPSPFSGASSPPCPPQHGSPPLLPTPPQCGTPAPPPPPPQHGSPAPPPPPLYRGPSPPSPPPHMHGGPPPPPPPPPLYGDPPPPPPPPLYGGTPPPPPAPFRGGPPPAPPPPSYGGSPPPPPPPPPPPPSNGGPPPPPPPPFRGGPPPPPPPPSYGGPPPPPPPPSYGGPPPPSPPPSYGGPTSFRGGPPPPPPPPLHGGPPPPPPPPMRGAPPPPPSPLGRGAPPPPPPPRSGGPPPPPPGPCALGPPAPPRPPAGVGAPPPPPPLGVKGANAAAAAGRGRGLSRPSGFGAGVTGPRKSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVTELESLFSANVPKPADSGGKSGGRRKSVGSKTDKVQLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKDEMELLKGYTGDKETLGKCEQFFFELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNIVNSACEEVRNSIKLKEIMKKILYLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASKTPALLDFHLDLCSLEFASKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSEVFRKTLKEFITVAETEVTFVTNLYSVVGRNADALALYFGEDPVRCPFEQVTGTLLNFVRMFRKAHEENCKQAELDKKKAEKEAEMEKAKGINLTSKSAK 1576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34275656 34286330 + Conep02aG0185500.1 Cone2ag0827 433294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 827 843 - -
Cone2ag0827 1576 PRINTS Proline rich extensin signature 666 682 - -
Cone2ag0827 1576 PRINTS Proline rich extensin signature 711 732 - -
Cone2ag0827 1576 PRINTS Proline rich extensin signature 648 660 - -
Cone2ag0827 1576 PRINTS Proline rich extensin signature 697 709 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 682 700 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 507 563 - -
Cone2ag0827 1576 Coils Coil 1445 1469 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 487 506 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 653 681 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 787 809 - -
Cone2ag0827 1576 PANTHER FORMIN-J 1060 1564 IPR051144 -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 575 620 - -
Cone2ag0827 1576 Pfam Formin Homology 2 Domain 1168 1538 IPR015425 -
Cone2ag0827 1576 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1163 1564 IPR015425 -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 1549 1566 - -
Cone2ag0827 1576 SMART it6_source 577 1574 IPR015425 -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 1549 1576 - -
Cone2ag0827 1576 SMART PTEN_C2_2 198 338 IPR014020 -
Cone2ag0827 1576 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cone2ag0827 1576 Gene3D Formin, FH2 domain 1167 1550 IPR042201 -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 638 652 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 487 1173 - -
Cone2ag0827 1576 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cone2ag0827 1576 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cone2ag0827 1576 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1097 1558 - -
Cone2ag0827 1576 Gene3D - 205 336 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 1217 1239 - -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 701 737 - -
Cone2ag0827 1576 FunFam Formin-like protein 1163 1550 - -
Cone2ag0827 1576 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Cone2ag0827 1576 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cone2ag0827 1576 MobiDBLite consensus disorder prediction 860 1140 - -
Cone2ag0827 1576 Coils Coil 1539 1568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0984 Cone-Chr17:7577492 Cone2ag0827 Cone-Chr2:34275656 2.44E-280 dispersed
Cone2ag0827 Cone-Chr2:34275656 Cone8ag0537 Cone-Chr8:3939933 1.69E-233 dispersed
Cone13ag0054 Cone-Chr13:337662 Cone2ag0827 Cone-Chr2:34275656 0 wgd
Cone16ag0189 Cone-Chr16:1212438 Cone2ag0827 Cone-Chr2:34275656 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0827 K28090 - csv:101215105 898.271