Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0843 ATGGGATTGTTGTCTATGTATGATGAACCAACCAAAGATCGTCATCATGATCTATACAATTTCTTGTTTCCATGCCAACAGCTTCCATTTGATGATTTTGGAAATGGCTGTTCTTCATTGGAGGGGAACTATAATGGTTATCTGCCCATGCATAGCCATTTGGATAACGCTATCCCTGTTTACCAGCCTTTGTATGAATCGATGTTGGATTTTGATCAACCCTTTACAACTCTAATCGAAGATTATGTTTTCTGGGGTTCTAGTGGAAATCATGAGGTTGGAGTCCATTGTAACGAAGAAATTAATGTTAAGCAGCCATTGTTGTTATCTAATTTCAAGGCTGATGATGGAGATCTTCTTCATCAAAATGGAGAGGAAGCAATTAAAAGAGAGGATGTTGGCGAAGATAAGTGCATGAATATGAGAGATGATCATAAAACTAGTTCTAAAGCATTGTCTAGAGAAATGATATCAAGGTATTTCTACATGCCTATAACTGAGGCAGCAAAGGAGCTCAATGTAGGCCTCACTTTGTTAAAGAAAAGATGTCGAGAGTTGGGTATCCGTCGATGGCCGCATAGAAAGTTGATGAGCCTCCAAACCCTAATCCACAATGTCGAGGAACTGACTAAAGAGGAAAGGGAGGAGAATGAAGGGAAGTTGAGGGAAGCACTAGAAATATTGGAGAAGGAAAAAAAGTTGATGGAAGAAGCTCCCGATATGGACCTTGAGAATAATACTAGGAGGCTAAGACAGGCTTGCTTTAAGGCCAACTACAAGAAGAGAAAATTAATAAATTGTGGGAGTTAA 810 39.26 MGLLSMYDEPTKDRHHDLYNFLFPCQQLPFDDFGNGCSSLEGNYNGYLPMHSHLDNAIPVYQPLYESMLDFDQPFTTLIEDYVFWGSSGNHEVGVHCNEEINVKQPLLLSNFKADDGDLLHQNGEEAIKREDVGEDKCMNMRDDHKTSSKALSREMISRYFYMPITEAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIHNVEELTKEEREENEGKLREALEILEKEKKLMEEAPDMDLENNTRRLRQACFKANYKKRKLINCGS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34429850 34431383 - Conep02aG0187300.1 Cone2ag0843 433310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0843 269 PANTHER PROTEIN RKD4 144 265 IPR044607 GO:0003700(InterPro)
Cone2ag0843 269 Pfam RWP-RK domain 152 199 IPR003035 -
Cone2ag0843 269 ProSiteProfiles RWP-RK domain profile. 135 219 IPR003035 -
Cone2ag0843 269 Coils Coil 211 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0006 Cone-Chr14:49551 Cone2ag0843 Cone-Chr2:34429850 1.13E-17 dispersed
Cone2ag0843 Cone-Chr2:34429850 Cone8ag0893 Cone-Chr8:8705777 2.47E-23 dispersed
Cone2ag0843 Cone-Chr2:34429850 Cone12ag0864 Cone-Chr12:7730896 1.24E-24 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45733 PF00702 Hydrolase 1.10E-17 CL0137 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0843 - - - 0.0