Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone2ag0881 | ATGGGTGGAAATGGAAAGCACAGGTGGAAATTCTCAATCCATCGGACTCCAACAAGTTCAAAGCTCGAACCGAAAGGACCGCCTAAAGAGTTCCTCTGCCCCATTTCTGGATCTTTAATGGTGGACCCTGTGGTTGTTTCCACAGGCCAGACCTTTGAGCGAGTCTCAGCTCAAGTTTGCAGAGACTTAAACTTTTTTCCCAAGCTTGAAGAAGACGGCTCGAACCCTGATTTCTCCACCATGATCACCAATTTGAACATGAAAACGACGATTCTCAATTGGTGTCACGATTCCGGTACGCCGCCGCCGCGAGCTCCCGATTACTCTGCCGTTGAGAGAATCGTCTGGAGCTTGATCGGCGAGCAGAAACCGGAGCCGAGTCTTAGGGTTTCGGAACGGGAGTTGTTGAAAGGCGTCGCGGAAAAACCGGCGGTGAAGTTCACTCACGCGGCGACGGAGTTAGGTCATCGAGTCAATCACTTCTACTCGAGCTCGGAGGAATCCGTCGTTGTCGGAGCCGGTAGCACGCCGGGAACCCCGCTTCCGTTCACAACTCGACCGACTTGTTACTCGTCATCTTCTTCTGCGTCCTCCTCTGGACTTGTCGAAACAGAAACCCTAATCCCTAATTCCACCTCGTCGGAAGAAGAAGCGAGATTAATCCAGAAGCTTAAAAGCTCCGAAGTGGTTAATCAAGAAGAAGGTGTGATTTCTCTGAGGAAGATCACCAGATCGAACGAGCAAGCTAGGGTTTCTCTCTGTACGCCACTGTTACTCCTAGCTCTGAGAAATCTCATTTCCTCTCGATACGCCGTCGTTCAGGTCAACGCGGTAGCTTCGTTGGTCAACCTCTCGCTCGAGAAACCCAATAAGGTGAAGATCGTACGGTCAGGATTCGTTCCGCCATTGATCGACGTGTTAAAGAGTGGACTCAGTGAGTCACAAGAACACGCTGCCGGCGCGCTCTTCAGCTTAGCTTTAGAAGACGAGAACAAGATGGCGATTGGAGTGCTCGGCGCGTTGCAACCGTTAATGCACGTGCTGAGGTCAGAAAGTGAGCGGACTCGGAATGACTCGGCGCTTTGTTTGTACCATTTGAGTCTGACTCAGAGCAACCGAGTCAAACTCGTTAAACTCGGTGCTGTTCCATCGCTATTATCTATGGTTAAATCAGGCAATTTAGTGAGCCGGGTCTTGTTAATTCTATGTAATTTAGCGGTTTGTCACGAGGCAAGATCCGTCATGCTTGATAGTAATGGAGTGGGGACTTTGGTCGGAATGTTGAGGGGGAACGAGTTGGATTCAGAGTCAACCCGAGAGCACTGTGTGGCGGCACTTTATGCACTGAGTCATGGTGGGTTTAGGTTTAAAGGGTTGGCCAAGGAGGCAAGAGCGGTGGAGGTGTTGAGGGAGGTGGAAGAGAGAGGCAGTGAGAGAGCCAGAGAGAAGGCGAAGAGGATTTTGCAGATGATGAAAGGGAGAGAACAGAGGGATGACGAGTTCGAGCGGTTGAATGAATCGGCTCTCGACTCGGATGAACTCGGTTGGACTTGCAACCGAGTTGGAGTTGGTGAGAAAAACGCAAACTCAACCAATTTTTAA | 1602 | 50.5 | MGGNGKHRWKFSIHRTPTSSKLEPKGPPKEFLCPISGSLMVDPVVVSTGQTFERVSAQVCRDLNFFPKLEEDGSNPDFSTMITNLNMKTTILNWCHDSGTPPPRAPDYSAVERIVWSLIGEQKPEPSLRVSERELLKGVAEKPAVKFTHAATELGHRVNHFYSSSEESVVVGAGSTPGTPLPFTTRPTCYSSSSSASSSGLVETETLIPNSTSSEEEARLIQKLKSSEVVNQEEGVISLRKITRSNEQARVSLCTPLLLLALRNLISSRYAVVQVNAVASLVNLSLEKPNKVKIVRSGFVPPLIDVLKSGLSESQEHAAGALFSLALEDENKMAIGVLGALQPLMHVLRSESERTRNDSALCLYHLSLTQSNRVKLVKLGAVPSLLSMVKSGNLVSRVLLILCNLAVCHEARSVMLDSNGVGTLVGMLRGNELDSESTREHCVAALYALSHGGFRFKGLAKEARAVEVLREVEERGSERAREKAKRILQMMKGREQRDDEFERLNESALDSDELGWTCNRVGVGEKNANSTNF | 533 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 34729517 | 34731406 | + | Conep02aG0191100.1 | Cone2ag0881 | 433348 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone2ag0881 | 533 | ProSiteProfiles | U-box domain profile. | 26 | 101 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone2ag0881 | 533 | Gene3D | - | 210 | 490 | IPR011989 | - | |
Cone2ag0881 | 533 | Pfam | Armadillo/beta-catenin-like repeat | 289 | 326 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | Pfam | Armadillo/beta-catenin-like repeat | 329 | 367 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 380 | 420 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | SUPERFAMILY | ARM repeat | 219 | 491 | IPR016024 | - | |
Cone2ag0881 | 533 | SUPERFAMILY | RING/U-box | 16 | 100 | - | - | |
Cone2ag0881 | 533 | SMART | Ubox_2 | 30 | 94 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone2ag0881 | 533 | SMART | arm_5 | 328 | 368 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | SMART | arm_5 | 287 | 327 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | SMART | arm_5 | 408 | 451 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | SMART | arm_5 | 369 | 407 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 26 | 99 | IPR013083 | - | |
Cone2ag0881 | 533 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 298 | 335 | IPR000225 | GO:0005515(InterPro) | |
Cone2ag0881 | 533 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cone2ag0881 | 533 | PANTHER | U BOX DOMAIN-CONTAINING | 22 | 492 | - | - | |
Cone2ag0881 | 533 | Pfam | U-box domain | 28 | 94 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone2ag0881 | 533 | FunFam | RING-type E3 ubiquitin transferase | 215 | 491 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone2ag0881 | Cone-Chr2:34729517 | Cone11ag1246 | Cone-Chr11:9316383 | 1.53E-09 | dispersed | |
Cone13ag0120 | Cone-Chr13:709968 | Cone2ag0881 | Cone-Chr2:34729517 | 1.27E-127 | wgd | |
Cone16ag0900 | Cone-Chr16:9344124 | Cone2ag0881 | Cone-Chr2:34729517 | 1.18E-114 | wgd | |
Cone16ag0127 | Cone-Chr16:718916 | Cone2ag0881 | Cone-Chr2:34729517 | 2.02E-241 | wgd | |
Cone19ag0122 | Cone-Chr19:685798 | Cone2ag0881 | Cone-Chr2:34729517 | 2.28E-120 | wgd | |
Cone2ag0153 | Cone-Chr2:794797 | Cone2ag0881 | Cone-Chr2:34729517 | 8.37E-115 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone2ag0881 | - | - | - | 0.0 |