Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0883 ATGGTTGAAGGTTGTGATGCCTCCGTCTTTATCGCCTCCAATTCCTTCAACTCCACTGAACGAGACCATGAGGTCAATCTCTCCCTCCCTAGCAATGATTTTGACGTTCTTGTACGAGCCGAAACAACACTAGAACTGACATGCCCTGGGGTCATCTCCTGCTCGGACATAATAGCTCAGGCCACTAGGGACCTCATCACGATGGTGGGTGGTCCATTTTACAGAGTCCCTCTGGGTCGTAAAGATTCAGATTTATTGCCGGTCGACATCAATCTACCAAGATTGCATACAATCGGCTTTTCACACTGTAAGGAGTTTACAGATCGTCTGTTTCTTTACAATAAGACTACGCCAACTGATCCTGAAATGTACCCTCCATTGGCTGATGGGTTGAAGAAACTGTGTGCAAATTATGTAAATGATTCAGGACTTAGAGCTTTTAATGATATCATGACTCCCGGAAAGTTTGATAACATGTATTTTCAGAACATTCTCAGGGGATTGGGGCTTTTAACTTCAGATCATGCACTTGGACAGGATACGAGAACAAGGCCGATTGTAGAGCTATATGCAGCAAACCAGACCGTGCATTTTTCAATGACTTTGCCACAGCCATGGAAAAGCTTAGTGTGTTGA 636 44.34 MVEGCDASVFIASNSFNSTERDHEVNLSLPSNDFDVLVRAETTLELTCPGVISCSDIIAQATRDLITMVGGPFYRVPLGRKDSDLLPVDINLPRLHTIGFSHCKEFTDRLFLYNKTTPTDPEMYPPLADGLKKLCANYVNDSGLRAFNDIMTPGKFDNMYFQNILRGLGLLTSDHALGQDTRTRPIVELYAANQTVHFSMTLPQPWKSLVC 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34735984 34736700 - Conep02aG0191300.1 Cone2ag0883 433350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0883 211 PRINTS Plant peroxidase signature 51 61 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PRINTS Plant peroxidase signature 70 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PRINTS Plant peroxidase signature 32 45 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 ProSiteProfiles Plant heme peroxidase family profile. 1 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 SUPERFAMILY Heme-dependent peroxidases 2 196 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 Gene3D - 1 84 - -
Cone2ag0883 211 Gene3D Peroxidase, domain 2 90 200 - -
Cone2ag0883 211 Pfam Peroxidase 95 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 Pfam Peroxidase 2 84 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PANTHER - 96 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PRINTS Haem peroxidase superfamily signature 52 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0883 211 PRINTS Haem peroxidase superfamily signature 70 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0883 Cone-Chr2:34735984 Cone11ag0046 Cone-Chr11:222204 1.86E-45 dispersed
Cone13ag0121 Cone-Chr13:713201 Cone2ag0883 Cone-Chr2:34735984 2.00E-92 wgd
Cone16ag0901 Cone-Chr16:9346509 Cone2ag0883 Cone-Chr2:34735984 4.55E-68 wgd
Cone16ag0126 Cone-Chr16:712587 Cone2ag0883 Cone-Chr2:34735984 2.19E-111 wgd
Cone19ag0123 Cone-Chr19:688592 Cone2ag0883 Cone-Chr2:34735984 4.44E-89 wgd
Cone2ag0152 Cone-Chr2:793258 Cone2ag0883 Cone-Chr2:34735984 1.33E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0883 K00430 - mdm:114825404 259.61