Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0885 ATGGTGGTCTTGGGTTTTGATGTTGTTGATCTTCTTAACGAAATTGACGCCTTAGATTTGCTGGGTTTTGATCCCGACATGTCGCAGAAGAGAAACCCTGATGATGCCAAAGCTCGATTCGAAGGGAATAGTTCAGAAGATAAGCGTAGAAGGGTTCTCACTTTCAGAAGTGTCGTATTGGAGGTAATGCGCTTGCAAAGGATTCAAAATTTGTTAGAGCCTATGCTTCGGAAAGTGGTCCGGGAGGAAGTCGATCTTGCATTAAGAAAGCATTTAAGCAGCATGAAACAGAATGATGAGACTGATGGGAAAGAAGTGCACTTTTCCGAGTTAAGAAGTTTAGAGCTAAAATTCAGCAATAGTCTCTCTCTTCCGGTATTCACTGGAGCTCAAATAAAGGGGGTGGATGGGTCAGACTTGAAAGTATCTTTGATGGACGCTCTTACCGGGCAAATTATTGAGTTTGGACCTAAAGCTTCTTCTATGGTGGAGATTGTAGTACTTGAGGGTGATTTTGATGGTGATGAGAACGGAAACTGGAATATTGAAGAGTTTAAGGGTAATATTTTGCGGGAGAGAGAAGGGAAGAAGCCGATTCTAATGGGGGATCAGTTTCTGACTCTTAAAGATGGGATTGGTTTGGTGGGTGAGATTTGTTTTACAGATAATTCCAGCTGGACTAGGAGCCGTAGATTTAGGCTTGGAGCAAGAGTTGTGGAAGATAGCTTGGGTGGAATCAGAGTGAAAGAAGCAAAGACAGAGCCATTTATCGTGAAGGATCATCGTGGAGAATTGTACAAGAAGCATCATCCGCCATCTCTTTTAGATGAAGTGTGGAGGTTAGAGAAAATCGGCAAAGACGGAGCTTTTCATAAGCGTTTGTGCACGGAGAAGATCACGACTGTTAAGGACTTTCTGATTCAACTCTTTAGAGACCCCATTCGACTCCGAAATATCATTGGCACAGGTATGTCCGCTAAGATGTGGGAAGTCACCGTGGAGCATGCTCGGACATGCGTACTTGATAAGGCTCCGCTGTACTTGTACTACTACCCTCAAGGTTCCGAACAGAAAACAGGAGTGGTTTTTAATATTGTCGGCCAAGTCATGGGATTATATCGTGATTGTCATTATGTTCCTGTAGACAAGCTCTCAGAAATCGAGAAGGCCGATACGGAAAACATGGTTATCTCAGCATCTCAAAATTGGGAAGAAGTGGTCGCATTCAATGACCCGACCTCTAATGTCATCACCTTTTCCGACCCTACCAATGCTCTTTACATCTCAAACTTGCCCCAATCCGATGGTCCATATGGATCCAAGATTTTGTCTACTCCTAGGATCGGCGAATTCGACTACACACATTCAAACATGTTTTCTCCCGATATCATTTCATCCTTGTACTCCATTGGAAATATCGGATCCAGTCTAGATGACTATACCTTAGAAAATATTGACTCTATCCCTGTCGATCTAAGATACTATCCCAATTCAGGCTTCCAAGACCAACCAAGCAGCAACTCTTTGACCTGTGTTTCCGAATCCTTGAACCAAACTTTCTACGATGAGGACCATTTGCGATATTTTGAATCCGACCTTCAGTGTGAAAACTCGAGCTATGAACCACAAGCCCGCCTCCAAAACCATCCAACTGCTAAGAGGAGATGGAAGAAACTGTTCAATGTGGTTAATGTGCTCAAATGGTTCTTAGTATCGAGCCACATGACGAAGAAAACTTGA 1740 43.22 MVVLGFDVVDLLNEIDALDLLGFDPDMSQKRNPDDAKARFEGNSSEDKRRRVLTFRSVVLEVMRLQRIQNLLEPMLRKVVREEVDLALRKHLSSMKQNDETDGKEVHFSELRSLELKFSNSLSLPVFTGAQIKGVDGSDLKVSLMDALTGQIIEFGPKASSMVEIVVLEGDFDGDENGNWNIEEFKGNILREREGKKPILMGDQFLTLKDGIGLVGEICFTDNSSWTRSRRFRLGARVVEDSLGGIRVKEAKTEPFIVKDHRGELYKKHHPPSLLDEVWRLEKIGKDGAFHKRLCTEKITTVKDFLIQLFRDPIRLRNIIGTGMSAKMWEVTVEHARTCVLDKAPLYLYYYPQGSEQKTGVVFNIVGQVMGLYRDCHYVPVDKLSEIEKADTENMVISASQNWEEVVAFNDPTSNVITFSDPTNALYISNLPQSDGPYGSKILSTPRIGEFDYTHSNMFSPDIISSLYSIGNIGSSLDDYTLENIDSIPVDLRYYPNSGFQDQPSSNSLTCVSESLNQTFYDEDHLRYFESDLQCENSSYEPQARLQNHPTAKRRWKKLFNVVNVLKWFLVSSHMTKKT 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34752469 34756572 + Conep02aG0191500.1 Cone2ag0885 433352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0885 579 PANTHER OS02G0177800 PROTEIN 46 523 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone2ag0885 579 Pfam Calmodulin binding protein central domain 274 339 IPR046830 -
Cone2ag0885 579 Pfam Calmodulin binding protein C-terminal domain 347 408 IPR046829 -
Cone2ag0885 579 Pfam Calmodulin binding protein-like N-terminal domain 114 261 IPR046831 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0885 Cone-Chr2:34752469 Cone6ag1054 Cone-Chr6:6149450 1.66E-107 dispersed
Cone13ag0122 Cone-Chr13:717559 Cone2ag0885 Cone-Chr2:34752469 4.97E-145 wgd
Cone16ag0125 Cone-Chr16:706271 Cone2ag0885 Cone-Chr2:34752469 0 wgd
Cone19ag0124 Cone-Chr19:690718 Cone2ag0885 Cone-Chr2:34752469 8.77E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0885 - - - 0.0