Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0900 ATGAAGGAGAACAACAGTGATGCGTTTGTTAGGGCGGACCAGATTGATCTGAAGAGCTTGGATGAGCAGCTTGAAAGGCATCTTAACAAAGCTTGGAGTATGGAGAAGAAGAACAAGACGAAAGATGACGACGACGAAGCAGAGGAAGATAGATATCGTGATAGTTTTATCACTTCCGCCACTAAAGCAGCTGCCTCCATCAGCGCCGCCGCATCTACCGCCGCTAAATTGGCGGTTAAGAAGGATCGGCAGGAGTGGGAGATCGACCCGCCTAAGCTCCTCATCAAATCCGTTATAGCACGGGGCACTTTTGGCACCGTTCATCGCGGTATTTACGACGGTCAAGATGTCGCCGTAAAATTGCTTGATTGGGGAGAAGAAGGGCAGAGGACAGAAGCTGAGATTGCTTCTTTAAGGACTGCATTTCAGCAAGAAGTTGCAGTATGGCATAAACTCGATCATCCTAATGTTACTAAGTTCATAGGTGCGACAATGGGCTCATCAGAATTACTTATACAAACAGAGAACGGTCAAATCGGGATGCCTAGCAATGTATGTTGTGTTGTTGTGGAATATCTCCCGGGAGGTGCTTTAAAATCTTATCTTATCAAGAATAGGAGAAGGAAGCTAGCTTTCAAGGTTGTTGTTCAGATTGCGCTCGATCTTGCTAGAGGGTTGAGTTACCTTCACTCGCAAAAGATTGTTCATCGAGATGTAAAGACGGAGAACATGCTACTCGACAAAACCAGAACAGTCAAAATTGCCGATTTTGGAGTTGCCCGTGTTGAGGCTTCTAATCCCAATGATATGACAGGCGAAACCGGGACACTTGGTTACATGGCTCCAGAGGTTCTTAATGGCAATCCATATAACCGAAAATGCGATGTGTACAGTTTCGGAATTTGTTTATGGGAAATTTATTGTTGCGACATGCCTTACCCCGACCTTAGCTTCTCAGAAGTGACTTCTGCTGTTGTTCGCCAGAATCTGAGACCAGAGATTCCAAGATGCTGTCCAGGTTCTTTAGCAAATGTAATGAAGCGATGTTGGGATGCAAACCCGGACAAACGGCCAGAAATGGATGATGTGGTTTCAATGTTGGAAGCCATTGACACATCCAAAGGTGGAGGAATGATCCCTGTTGATCAGCAACAGGGTTGTCTCTGTTTCCGAATGACCCGTGGGCCCTAA 1191 45.93 MKENNSDAFVRADQIDLKSLDEQLERHLNKAWSMEKKNKTKDDDDEAEEDRYRDSFITSATKAAASISAAASTAAKLAVKKDRQEWEIDPPKLLIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGQRTEAEIASLRTAFQQEVAVWHKLDHPNVTKFIGATMGSSELLIQTENGQIGMPSNVCCVVVEYLPGGALKSYLIKNRRRKLAFKVVVQIALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPGSLANVMKRCWDANPDKRPEMDDVVSMLEAIDTSKGGGMIPVDQQQGCLCFRMTRGP 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34824127 34827250 - Conep02aG0193000.1 Cone2ag0900 433367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0900 396 Pfam Protein tyrosine and serine/threonine kinase 95 367 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 SMART serkin_6 93 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 SUPERFAMILY Protein kinase-like (PK-like) 79 367 IPR011009 -
Cone2ag0900 396 FunFam Serine/threonine-protein kinase HT1 193 378 - -
Cone2ag0900 396 Coils Coil 10 37 - -
Cone2ag0900 396 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 Gene3D Phosphorylase Kinase; domain 1 82 176 - -
Cone2ag0900 396 MobiDBLite consensus disorder prediction 29 49 - -
Cone2ag0900 396 Gene3D Transferase(Phosphotransferase) domain 1 193 385 - -
Cone2ag0900 396 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 PRINTS Tyrosine kinase catalytic domain signature 338 360 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 PRINTS Tyrosine kinase catalytic domain signature 190 203 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 PRINTS Tyrosine kinase catalytic domain signature 228 246 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0900 396 FunFam Kinase suppressor of Ras 1 82 177 - -
Cone2ag0900 396 CDD STKc_MAP3K-like 99 367 - -
Cone2ag0900 396 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 368 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0120 Cone-Chr11:540829 Cone2ag0900 Cone-Chr2:34824127 1.57E-228 dispersed
Cone16ag0112 Cone-Chr16:657816 Cone2ag0900 Cone-Chr2:34824127 4.84E-258 dispersed
Cone18ag1359 Cone-Chr18:9340188 Cone2ag0900 Cone-Chr2:34824127 1.11E-229 dispersed
Cone20ag0852 Cone-Chr20:6216207 Cone2ag0900 Cone-Chr2:34824127 4.05E-92 dispersed
Cone2ag0900 Cone-Chr2:34824127 Cone7ag0269 Cone-Chr7:1118657 3.78E-187 dispersed
Cone2ag0900 Cone-Chr2:34824127 Cone2ag0904 Cone-Chr2:34854307 3.69E-56 proximal
Cone13ag0137 Cone-Chr13:792263 Cone2ag0900 Cone-Chr2:34824127 1.44E-64 wgd
Cone19ag0138 Cone-Chr19:746743 Cone2ag0900 Cone-Chr2:34824127 1.85E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82634 PF00096 zf-C2H2 0.0087 CL0361 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0900 - - - 0.0