Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone2ag0904 | ATGGAGACCAAAACGGAGGCGATACTAAGAGAGTACAAGCGAGCAGTGTCATGGTCGAAGAAGTACTTAGTCTCATCTGGTGCAAAAATCAAAGGAGAAGGAGAAGAAGATTGGAGTGCTGATCTGTCTCAGCTCTTCATTGCCTCCAAATTTGCCAATGGAAGACATAGCAGGATTTACAGAGGACTTTACAAGCAAAAAGATGTTGCTATTAAGATGATAAGTCAGCCTGAAGAGGATGCAAATTTGGCTTCTATCCTAGAAAATCACTTCATTTCTGAAGTGGCCTTGATCTTTAGGCTGAGCCACCCCAATATCATCACTTTTATTGCGGCTTGTAAGAATCCACCCGTGTTCTGTATCATAACAGAGTACATGGCGGGAGGTTCGTTAAGAAAATATCTTCACCATCAAGAGCCAAATTCGGTCCCACACAGCCTAATTTTGAAACTAACACTAGATATATCCCGTGTGATGCAATACCTTCATTCCCAAGGAATACTTCATAGGGATCTCAAATCCGAGAATCTGCTTCTGGGTGATGATATGTGTGTTAAGAATTCGAATGTAGAAGAAGTGAAAAAGGGATTTACTGGAACTTACCGTTGGATGGCACCAGAAATGATCAAAGAGAAACACCATACAAAAAAAATCGATGTTTATAGCTTTGGGATTGTTCTTTGGGAGCTTTTAACTGCATTGATTCCGTTCGATAACTTAACTCCCGAACAAGCTGCATTTGCTGTTCACCAGAAGAATGCAAGGCCGCCATTACCGTCTGAGTGTCCTTTGGCATTTAGTCATTTGATCAATAGATGTTGGTCAAGTAATGCGGATAAGAGACCGAATTTCGACGAGATTGTTTTGATTCTTGAGAGTTATGCAGAGTCACTTGAGAAGGATCACCACTTTTTCTCATCTTACAAACCTACGGAACACACTTTTCTCCGGTGCTTGCCGAAATGTATTGCCGGCCAAAGGTCAGCTTCTTTAAGGGTTTAG | 1002 | 41.52 | METKTEAILREYKRAVSWSKKYLVSSGAKIKGEGEEDWSADLSQLFIASKFANGRHSRIYRGLYKQKDVAIKMISQPEEDANLASILENHFISEVALIFRLSHPNIITFIAACKNPPVFCIITEYMAGGSLRKYLHHQEPNSVPHSLILKLTLDISRVMQYLHSQGILHRDLKSENLLLGDDMCVKNSNVEEVKKGFTGTYRWMAPEMIKEKHHTKKIDVYSFGIVLWELLTALIPFDNLTPEQAAFAVHQKNARPPLPSECPLAFSHLINRCWSSNADKRPNFDEIVLILESYAESLEKDHHFFSSYKPTEHTFLRCLPKCIAGQRSASLRV | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 34854307 | 34856725 | + | Conep02aG0193400.1 | Cone2ag0904 | 433371 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone2ag0904 | 333 | PRINTS | Tyrosine kinase catalytic domain signature | 218 | 240 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | PRINTS | Tyrosine kinase catalytic domain signature | 199 | 209 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | PRINTS | Tyrosine kinase catalytic domain signature | 123 | 136 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | PRINTS | Tyrosine kinase catalytic domain signature | 262 | 284 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | SMART | serkin_6 | 45 | 305 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 316 | - | - | |
Cone2ag0904 | 333 | CDD | STKc_MAP3K-like | 54 | 291 | - | - | |
Cone2ag0904 | 333 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 127 | - | - | |
Cone2ag0904 | 333 | FunFam | Serine/threonine-protein kinase isoform 1 | 35 | 127 | - | - | |
Cone2ag0904 | 333 | ProSiteProfiles | Protein kinase domain profile. | 45 | 305 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | Pfam | Protein tyrosine and serine/threonine kinase | 49 | 289 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone2ag0904 | 333 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 289 | IPR011009 | - | |
Cone2ag0904 | 333 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 41 | 292 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0137 | Cone-Chr13:792263 | Cone2ag0904 | Cone-Chr2:34854307 | 3.51E-173 | dispersed | |
Cone16ag0108 | Cone-Chr16:632936 | Cone2ag0904 | Cone-Chr2:34854307 | 3.35E-212 | dispersed | |
Cone19ag0138 | Cone-Chr19:746743 | Cone2ag0904 | Cone-Chr2:34854307 | 2.36E-178 | dispersed | |
Cone1ag0032 | Cone-Chr1:202811 | Cone2ag0904 | Cone-Chr2:34854307 | 1.23E-115 | dispersed | |
Cone2ag0904 | Cone-Chr2:34854307 | Cone5ag1835 | Cone-Chr5:12907493 | 1.61E-115 | dispersed | |
Cone2ag0900 | Cone-Chr2:34824127 | Cone2ag0904 | Cone-Chr2:34854307 | 3.69E-56 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82635 | PF01590 | GAF | 1.80E-12 | CL0161 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone2ag0904 | - | - | - | 0.0 |