Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0910 ATGGAGAGAGCAGCCGTCAGTACTTACTCTTCCTCCTCTCTTCCTCTTCTCAAGCCTCGACACCCTACTTTCTCCTCCACCTTCGCCTTCAATCCAATTCGCCTCCCTTCTTCATCTGCTTCTGCTCTGTCTTCGTCGAGCTTGAACGATCTCGACTCCTCCTCCTCCTCCAGCTGCTCCAATGTCGCCGCTCTCTCTTCTTCATATTTCGCTCGCCGATCCTGGTCCTTGTCGTCTTCTCCGTTTTCTTCGGCGAAGCTTAGGCCATGGACCGGTGTTCCATTTCTCGGTTCTGATTGTGATGCGAATCGGTCTGTTGAAGTAAGGGCTACGTCAGTGCCGGAGAACACTGGAGATAAGGCCTCTGAGTCTGGTAGCTTTCTTGAGACTCTTGAGCTTGGATCGTTGTTTGGATTCTGGTTCCTATTCAACATCTACTTCAATATCTACAACAAGCAGGTCTTGAAGGTGTACCCATACCCTGCAACTGTCACTGCAGCTCAATTTGCTGTTGGTACTGCCCTTGTTCTTTTTATGTGGGGTTCTAATCTCTATAAGAAGCCGAAAGTTAGCCATTCACAGCTTGTAGCTATAGTTCCACTTGCAGTTGTTCACGTGTTGGGAAACCTTTTTACTAATATGAGTCTTGGGAAAGTGGCTGTGTCCTTTACTCACACAATCAAAGCTTCTGAGCCTTTCTTCTCCGTCATCCTGTCTGCCATGTTTCTCGGAGAGTTTCCTACCCCATGGGTGGTTGCTTCCCTTGTACCAATTGTCGGAGGTGTGGCGTTGGCATCAGCCACTGAGGCCTCATTTAATTGGGCTGGGTTTTGGAGTGCAATGGCTTCCAATTTGTCAAATCAATCTCGTAATGTCCTTAGCAAGAAGGTCATGATCAACAAAGAGGAAACAATCGACAACATCACTTTGTTTTCAATAATAACAGTAATGTCATTTTTCTTGGTTTTCCCTTTCACTATCTTCACGGAAGGCATCAAGATTTCTCCTGGTTTCCTTCAATCAGCTGGATTAAATGTTAAACAAGTCTACACGAGGTCTCTTATCGCTGCACTTTGCTTCCATGCTTATCAACAGGTTTCTTATATGATATTGCAAAGGGTATCTCCTGTTACTCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTTCTCTTCTTCAGAACACCTGTTTCTCCGATCAACTCAATTGGCACCGGAGTGGCTCTTGCCGGAGTTTTCCTATATTCAAGGGTCAAGCGCATCAAGTCAAAGCCAAAGACAGCTTAA 1302 46.16 MERAAVSTYSSSSLPLLKPRHPTFSSTFAFNPIRLPSSSASALSSSSLNDLDSSSSSSCSNVAALSSSYFARRSWSLSSSPFSSAKLRPWTGVPFLGSDCDANRSVEVRATSVPENTGDKASESGSFLETLELGSLFGFWFLFNIYFNIYNKQVLKVYPYPATVTAAQFAVGTALVLFMWGSNLYKKPKVSHSQLVAIVPLAVVHVLGNLFTNMSLGKVAVSFTHTIKASEPFFSVILSAMFLGEFPTPWVVASLVPIVGGVALASATEASFNWAGFWSAMASNLSNQSRNVLSKKVMINKEETIDNITLFSIITVMSFFLVFPFTIFTEGIKISPGFLQSAGLNVKQVYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFRTPVSPINSIGTGVALAGVFLYSRVKRIKSKPKTA 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34906514 34909349 - Conep02aG0194000.1 Cone2ag0910 433377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0910 433 SUPERFAMILY Multidrug resistance efflux transporter EmrE 177 266 - -
Cone2ag0910 433 SUPERFAMILY Multidrug resistance efflux transporter EmrE 345 424 - -
Cone2ag0910 433 PANTHER SOLUTE CARRIER FAMILY 35 124 422 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cone2ag0910 433 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 131 431 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone2ag0910 433 Pfam Triose-phosphate Transporter family 132 421 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0106 Cone-Chr11:463083 Cone2ag0910 Cone-Chr2:34906514 2.59E-140 dispersed
Cone2ag0910 Cone-Chr2:34906514 Cone9ag1074 Cone-Chr9:6041529 1.29E-67 dispersed
Cone13ag0145 Cone-Chr13:911231 Cone2ag0910 Cone-Chr2:34906514 5.88E-206 wgd
Cone16ag0098 Cone-Chr16:545209 Cone2ag0910 Cone-Chr2:34906514 1.40E-251 wgd
Cone19ag0142 Cone-Chr19:787906 Cone2ag0910 Cone-Chr2:34906514 5.12E-206 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0910 K15283 - csv:101203848 572.778