Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone2ag0953 | ATGAAAGCAGCCATAGTCATCACCTCATCTCTTCTTGTCTTGCTTTCTCTTTCGGTTCATGAATTTGTCTTAGCTTCTTCTTCATCAAATACTTCAGAGAAAAGCAAGGAACCGGAGCTTGTACATGGAGTACATTGTTCCCGAGAAAGAAGTCGGACGGCCTGGAATATTATTCAGGAGTATTTGATGCCATTTGTGGAGAAGGAGAAGTATCAGCTTTCGAGCAAGTGTAGGCTTCATCCTGACAATGATATGTTTAGAGATCATGAGCAACACAAGATTCATATGGATGTAAATGAGTGGCAATGTGGATATTGTAAGAAAAGCTTCCATGCCGGGAAATTTCTTGATCAGCATTTTGACAGTCGACACTCCGACCTTCTTAATGCTAGCCAGAGCAGCTGCTTGGCCGATCTATGTGGGGCATTGCATTGTGACCTCGTGATGAATACCAAGTCACCAAAATCCAAGTGCAATCCGGCAGCAGCTGCAAGGAACCGGCACCTCTGTGAGAGTCTTGCGGATAGCTGTTTCCCCATCCATAATGGTCCCTCAGCTAGCCGTCTTAATGAAGCAAACAAGTGTCTTTTACCTATCCATGGCGATTCTGACAATGATGCTGCTTCCTCTTTTCTATATCCTCGTTTATTTGCACCAGAGAGAAAAGAGAAATGGAACCCAAAATCTCAAGCGCATCTCGAAAGTTGGATGGAAAGCAAAGCCCTCATAACGTGTATCGAGCTTAGGAGTTTGAAATATACTCCATTCGTTGATACTCAAAACAAATCGGAAGGAAGCAAACAAATCGGAAAACGGAATCGTACAACTCAAATACGACCCGTCCCGGCTTCATATTTTTTCCACCACCCGAGTCTGCATTTGTTGTGGAAAAAAAGTATAGGTGAAGATATTATTGCAGCTAAAAGTGAGAGTCATGCAGGTGGCGGTATAGTGGCTGTGGAGGCGAAGGTGGAGGGATTGCTGGGGGTCATAGTCGGCGAGCACGAGCCTGAGGAGAATCTGATGAATCGGTTCAGAAGAGAGGTCTTGAAAGCAGGCGTGTTGCAGGAATGTAAGGGGCGGAGATTCTTCGAGAACATGCGGGAGAAGAAGAAGAGGAAAGAGAATCAGAGATTGTTGTTTATCGAGTTCATGGCTTGA | 1161 | 44.79 | MKAAIVITSSLLVLLSLSVHEFVLASSSSNTSEKSKEPELVHGVHCSRERSRTAWNIIQEYLMPFVEKEKYQLSSKCRLHPDNDMFRDHEQHKIHMDVNEWQCGYCKKSFHAGKFLDQHFDSRHSDLLNASQSSCLADLCGALHCDLVMNTKSPKSKCNPAAAARNRHLCESLADSCFPIHNGPSASRLNEANKCLLPIHGDSDNDAASSFLYPRLFAPERKEKWNPKSQAHLESWMESKALITCIELRSLKYTPFVDTQNKSEGSKQIGKRNRTTQIRPVPASYFFHHPSLHLLWKKSIGEDIIAAKSESHAGGGIVAVEAKVEGLLGVIVGEHEPEENLMNRFRREVLKAGVLQECKGRRFFENMREKKKRKENQRLLFIEFMA | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35159780 | 35163597 | + | Conep02aG0198700.1 | Cone2ag0953 | 433420 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone2ag0953 | 386 | Pfam | Ribosomal protein S21 | 330 | 378 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone2ag0953 | 386 | NCBIfam | 30S ribosomal protein S21 | 330 | 377 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone2ag0953 | 386 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 103 | 124 | IPR013087 | - | |
Cone2ag0953 | 386 | Gene3D | Ribosomal protein S8 | 342 | 378 | IPR038380 | - | |
Cone2ag0953 | 386 | PANTHER | ZINC FINGER PROTEIN-RELATED | 2 | 192 | - | - | |
Cone2ag0953 | 386 | PRINTS | Ribosomal protein S21 family signature | 339 | 348 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone2ag0953 | 386 | PRINTS | Ribosomal protein S21 family signature | 331 | 339 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone2ag0953 | 386 | PRINTS | Ribosomal protein S21 family signature | 351 | 361 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone2ag0953 | 386 | PRINTS | Ribosomal protein S21 family signature | 363 | 373 | IPR001911 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0989 | Cone-Chr16:9743748 | Cone2ag0953 | Cone-Chr2:35159780 | 9.61E-12 | transposed | |
Cone16ag0965 | Cone-Chr16:9655090 | Cone2ag0953 | Cone-Chr2:35159780 | 5.64E-78 | wgd | |
Cone16ag0045 | Cone-Chr16:247764 | Cone2ag0953 | Cone-Chr2:35159780 | 2.71E-92 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone2ag0953 | - | - | - | 0.0 |