Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0964 ATGGCGAACTTGGAAGATATCCCCTCCGTCGATCTCATGACTGAGCTCCTCCGTCGGATGAAATGCAGCTCCAAACCCGACAAGCGCCTCATCCTCATAGGCCCACCTGGATCAGGAAAAGGAACCCAATCACCAATAATCAAGGATGAGTACTGCTTGTGCCACTTGGCTACTGGTGATATGTTAAGAGCTGCAGTTGCAGCTAAAACCCCTCTTGGGGTTAAGGCTAAAGAGGCAATGGACAAGGGTGAACTTGTGTCTGATGACTTGGTTGTTGGCATCATAGATGAAGCAATGAAGAAGCCTTCATGTCAGAAAGGCTTCATTCTTGATGGATTTCCAAGAACTGTGGTTCAAGCCCAAAAGCTCGATGAGATGCTTCAGAAGCAAGGAGTTAAAGTTGACAAGGTCCTTAACTTTTCCATTGATGATTCAATCCTCGAGGAGAGAATTACTGGACGTTGGATCCACCCATCCAGTGGAAGAACCTACCACACCAAATTTGCCCCTCCCAAAGTTCCCGGGATTGATGATGTAACTGGCGAGCCTTTGATTCAACGCAAGGATGATACTGCCTCTGTTCTCAAGTCTCGGCTCGAGGCATTTCACAAGCAGACCGAACCTGTGATTGACTATTATTCGAAGAAGAAGATTGTTGCTAATCTTCCAGCCGAGAGACCTCCCAAAGAAGTCACAACTGAAGTTCAGAAAGTGCTTTCCTCATAG 726 46.83 MANLEDIPSVDLMTELLRRMKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLQKQGVKVDKVLNFSIDDSILEERITGRWIHPSSGRTYHTKFAPPKVPGIDDVTGEPLIQRKDDTASVLKSRLEAFHKQTEPVIDYYSKKKIVANLPAERPPKEVTTEVQKVLSS 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35200753 35203039 - Conep02aG0199800.1 Cone2ag0964 433431

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0964 241 Pfam Adenylate kinase 32 217 - -
Cone2ag0964 241 ProSitePatterns Adenylate kinase signature. 108 119 IPR033690 -
Cone2ag0964 241 FunFam Adenylate kinase mitochondrial 28 241 - -
Cone2ag0964 241 CDD ADK 29 231 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 NCBIfam adenylate kinase 29 239 IPR006259 GO:0004017(InterPro)|GO:0005524(InterPro)|GO:0016776(InterPro)
Cone2ag0964 241 Gene3D - 1 240 IPR027417 -
Cone2ag0964 241 PRINTS Adenylate kinase signature 108 124 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 PRINTS Adenylate kinase signature 59 73 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 PRINTS Adenylate kinase signature 187 202 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 PRINTS Adenylate kinase signature 204 218 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 PRINTS Adenylate kinase signature 31 44 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 Pfam Adenylate kinase, active site lid 154 189 IPR007862 GO:0004017(InterPro)
Cone2ag0964 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 239 IPR027417 -
Cone2ag0964 241 Hamap Adenylate kinase [adk]. 28 240 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone2ag0964 241 PANTHER NUCLEOTIDE KINASE 25 238 IPR000850 GO:0004017(PANTHER)|GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006139(InterPro)|GO:0019205(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0964 K00939 - - osa:4350358 454.521
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0054 Cone-Chr2:266466 Cone2ag0964 Cone-Chr2:35200753 3.46E-07 dispersed
Cone16ag0439 Cone-Chr16:6735845 Cone2ag0964 Cone-Chr2:35200753 2.14E-34 transposed
Cone17ag0717 Cone-Chr17:5036979 Cone2ag0964 Cone-Chr2:35200753 7.26E-39 transposed
Cone16ag0982 Cone-Chr16:9724110 Cone2ag0964 Cone-Chr2:35200753 1.40E-07 wgd
Cone16ag0028 Cone-Chr16:180341 Cone2ag0964 Cone-Chr2:35200753 7.48E-170 wgd
Cone19ag0199 Cone-Chr19:1247532 Cone2ag0964 Cone-Chr2:35200753 1.43E-62 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g143 . . Bda06g00737 . . . . Bma12g01075 . Cmo18g00202 . . Car10g00061 . . . . Bhi02g00537 . . . Hepe09g0061 . . . . . . . . . Cone2ag0964 Cone16ag0028 . Cone19ag0199 Lsi02g00488 Csa01g00950 Chy12g01181 Cme12g01602 . Blo15g00217 Bda11g01817 . Bpe07g00882 . . . . . . . . . Car18g00219 Cpe09g00971 . Bhi08g01461 . . . . . . Cla03g00344 Cam03g0360 . Cco03g0365 Clacu03g0361 Cmu03g0966 Cre03g0659 . Csa01g00069 Chy02g02651 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003681 2 2 1 2 2 1 2 0 0 2 1 1 1 2 2 2 1 2 2 1 2 2 2 2 2 0 2 2 1 2 46