Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone2ag0970 | ATGTCTGTTGCTCTTATCCTCTTTTCCTCTCTCTCTTTTTTCCTCCTCTCTTTTCTCTTATCTCTCGTAAAAGAACTTCTTACCACCACTCCTCCTGCTCCTACTCCCAAATTACAACCTTCCTTCACCACCACTCATGGCCCTACTTCCTACCCCTTCATAGGTTGCCTAATCTCCTTCTGCCGAAATCAGCACCGCCTGTTATCATGGTACACCGATCTACTCTCAGGCTCACCATCACAGACCATAACGGTGCATCGGTTAGGAGCCAGGCGCACCATAGTCACGGCCAACCCGACCAATGTCGAATACATCCTCAAAACCAACTTCAACAACTTCCCGAAGGGCAAACCCTTCACTGACATCCTCGGCGATCTTCTAGGTTGTGGGATTTTCAACGTGGACGGGCAACTTTGGTTGACGCAACGCAAACTAGCTAGCCACGAGTTCAGCACAAGAACCCTAAGGCAATTTGTGGTCAAAACACTTGAAGAAGAAGTTTCTACTCGTCTGATCCCATTGCTTGAAAATGCTTGTGAGACTAATAGAGTTGTTGATTTCCAAGATTTGTTGAAGAGATTTGCTTTCGATGTGATATGTAAAGTCTCATTAGGCACGGACCCGAAATGTTTGGACCCATCGATCGATGAGCTGTCCGAAGTTAATGATCCCCTTGTTAAAGCTTTTGATTGTGCTACAGCCATTAGTGCGATGAGATCGATGGCTCCTATTTTTCTTGCATGGAAAATTAAGAGGGTTTTGAATATTGGGTCTGAAAAGAAACTCAAAGAATCTGTAGCATTCATTCATGATTCGGTAGTGAAGATAGTGAGGAACAAAAGGGTATCAAACAATATTGATCATCGTAAATCCTGTGATGATGTTGATGAGCATGATCATGATTTGCTGTCAAGATTGATATCAGCTGGTCATGGTGAAGAAGTTGTTAGAGATATGGTGATAAGTTTTGTAATGGCTGGAAGAGATACCACTTCATCTGCCCTAACTTGGCTCTTTTGGCTTCTTGCTAAGAATCCAAACATAGAGAAGATGATTGTGAGTGAAGTAAATAATTATATGTATGATCATGAAGGGTCATTTTTTGGCTATGAGGAGTTGAAGGAGATGAAATATTTGAAGGCTTGTTTATGCGAATCAATGCGGCTTTACCCACCTGTCGTATGGGACTCAAAACACACGGATTCGGACGATATTTTGCCAGACGGGACCCCTGTCAAGAGAGGAGATAGGGTTACATATTTTCCTTACGGTATGGGGAGGATGGAAGGGATATGGGGAAGGGATTGGGCCGAGTTTAGACCCGACCGGTGGTTTAATGGGCCCGTTGAGGACGGGGTGATGAAATCGGTTAGTCCTTTTGAGTTCCCGGTTTTTCAAGCCGGTCCGAGGGTTTGTCTAGGGAAGGAGATGGCTTTTATTCAGATGAAGTATGTAGTGGCCGAAGTGTTGAGCCGGTTTGAGATGAGGTTGGTTGATAGTGAGGTTGAACCGGTTTTCATTCCTTTGTTGACGGCTCACATGGCTGGTGGGTTGAAGGTAATGGTAAGGAAAAGGAGGAACAGTTATACAGTGTAG | 1596 | 44.36 | MSVALILFSSLSFFLLSFLLSLVKELLTTTPPAPTPKLQPSFTTTHGPTSYPFIGCLISFCRNQHRLLSWYTDLLSGSPSQTITVHRLGARRTIVTANPTNVEYILKTNFNNFPKGKPFTDILGDLLGCGIFNVDGQLWLTQRKLASHEFSTRTLRQFVVKTLEEEVSTRLIPLLENACETNRVVDFQDLLKRFAFDVICKVSLGTDPKCLDPSIDELSEVNDPLVKAFDCATAISAMRSMAPIFLAWKIKRVLNIGSEKKLKESVAFIHDSVVKIVRNKRVSNNIDHRKSCDDVDEHDHDLLSRLISAGHGEEVVRDMVISFVMAGRDTTSSALTWLFWLLAKNPNIEKMIVSEVNNYMYDHEGSFFGYEELKEMKYLKACLCESMRLYPPVVWDSKHTDSDDILPDGTPVKRGDRVTYFPYGMGRMEGIWGRDWAEFRPDRWFNGPVEDGVMKSVSPFEFPVFQAGPRVCLGKEMAFIQMKYVVAEVLSRFEMRLVDSEVEPVFIPLLTAHMAGGLKVMVRKRRNSYTV | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 35224812 | 35226407 | - | Conep02aG0200400.1 | Cone2ag0970 | 433437 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone2ag0970 | 531 | CDD | CYP86A | 81 | 518 | - | - | |
| Cone2ag0970 | 531 | PANTHER | CYTOCHROME P450 | 21 | 518 | - | - | |
| Cone2ag0970 | 531 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | SUPERFAMILY | Cytochrome P450 | 46 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | PRINTS | P450 superfamily signature | 472 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | Gene3D | Cytochrome P450 | 42 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | Pfam | Cytochrome P450 | 46 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0970 | 531 | FunFam | Cytochrome P450 | 40 | 528 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0600 | Cone-Chr17:3230226 | Cone2ag0970 | Cone-Chr2:35224812 | 4.35E-146 | dispersed | |
| Cone18ag0213 | Cone-Chr18:1052733 | Cone2ag0970 | Cone-Chr2:35224812 | 5.34E-137 | dispersed | |
| Cone18ag1427 | Cone-Chr18:9653458 | Cone2ag0970 | Cone-Chr2:35224812 | 1.04E-203 | dispersed | |
| Cone19ag0644 | Cone-Chr19:5523495 | Cone2ag0970 | Cone-Chr2:35224812 | 7.55E-140 | dispersed | |
| Cone19ag1179 | Cone-Chr19:8279317 | Cone2ag0970 | Cone-Chr2:35224812 | 2.61E-131 | dispersed | |
| Cone2ag0970 | Cone-Chr2:35224812 | Cone7ag1015 | Cone-Chr7:7851846 | 6.49E-139 | dispersed | |
| Cone16ag0020 | Cone-Chr16:148165 | Cone2ag0970 | Cone-Chr2:35224812 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone2ag0970 | K20665 | - | mdm:103409661 | 661.759 |