Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0023 | ATGGCCAGGGCCGCATCAGAGTCTGGATTTCATGTTTTGGCCGTCGATGATAGCATCATAGATAGGAGGCTAATTGAGAGGCTCCTCAAAATCTCTTCATTTGAAGTTACTACAGTTGATTCGGGTAACAAGGCATTGAATGAAGAAGATGAACATAGACTTATTGATCCAGAAAATCATCAGGAAGTGGAAGTAAATCTTATTATAACAGATTATTGTATGCCTGGAATGGCAGGCTATGATTTGCTGAAGAAAATCAAGGAATCATCTTCTTTTAGAAACATACCGGTTGTGATCATGTCATCTGAGAATGTCCCTGCAAGGATCAGCAGATGGTTGGAAGAAGGAGCAGAAGAGTTTTTCTTGAAGCCAGTGAAGCTACAAGATGTGAATAGGTTAAAACCCCATATGATGAAAAGCAAAGGAGTGAAGGATGACGATCATGTCCATAAACAAGAAAAGCAAGAAAGAGTAACAGTAGGAAAAGAAAAACACGAACAATTACAGCAGCAGCAATCAAGTAGTAGTAATAATAACAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAAGAAGAGTAGTACTATAGAAGCCGAGGAGGGAGTTTCATCTGATAGAACAACAAGACCAAGATTCAATGGAATCACTGGATTTGTCATATTAATTGACACAACGAAGATTTTAGTCTTATTTTTTTTATCTTCATCCCTTTTTGTCATATCTCTTTTTGTCATGCTCTCTTCTAATGCCGATGAATACTACAAGCATTAG | 783 | 38.7 | MARAASESGFHVLAVDDSIIDRRLIERLLKISSFEVTTVDSGNKALNEEDEHRLIDPENHQEVEVNLIITDYCMPGMAGYDLLKKIKESSSFRNIPVVIMSSENVPARISRWLEEGAEEFFLKPVKLQDVNRLKPHMMKSKGVKDDDHVHKQEKQERVTVGKEKHEQLQQQQSSSSNNNNNNNSSSSSSSSSKRKKSSTIEAEEGVSSDRTTRPRFNGITGFVILIDTTKILVLFFLSSSLFVISLFVMLSSNADEYYKH | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 145504 | 146792 | + | Conep03aG0002300.1 | Cone3ag0023 | 433482 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0023 | 260 | Gene3D | - | 11 | 210 | - | - | |
Cone3ag0023 | 260 | MobiDBLite | consensus disorder prediction | 196 | 210 | - | - | |
Cone3ag0023 | 260 | MobiDBLite | consensus disorder prediction | 139 | 211 | - | - | |
Cone3ag0023 | 260 | Coils | Coil | 151 | 171 | - | - | |
Cone3ag0023 | 260 | ProSiteProfiles | Response regulatory domain profile. | 11 | 138 | IPR001789 | GO:0000160(InterPro) | |
Cone3ag0023 | 260 | SMART | REC_2 | 10 | 137 | IPR001789 | GO:0000160(InterPro) | |
Cone3ag0023 | 260 | MobiDBLite | consensus disorder prediction | 139 | 164 | - | - | |
Cone3ag0023 | 260 | Pfam | Response regulator receiver domain | 12 | 129 | IPR001789 | GO:0000160(InterPro) | |
Cone3ag0023 | 260 | SUPERFAMILY | CheY-like | 8 | 132 | IPR011006 | - | |
Cone3ag0023 | 260 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 6 | 207 | IPR045279 | GO:0009736(InterPro) | |
Cone3ag0023 | 260 | CDD | REC_typeA_ARR | 12 | 133 | - | - | |
Cone3ag0023 | 260 | MobiDBLite | consensus disorder prediction | 165 | 195 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0023 | Cone-Chr3:145504 | Cone7ag0062 | Cone-Chr7:273575 | 3.21E-56 | dispersed | |
Cone13ag0617 | Cone-Chr13:6253790 | Cone3ag0023 | Cone-Chr3:145504 | 1.58E-67 | wgd | |
Cone19ag0548 | Cone-Chr19:4566224 | Cone3ag0023 | Cone-Chr3:145504 | 2.61E-66 | wgd | |
Cone19ag0548 | Cone-Chr19:4566224 | Cone3ag0023 | Cone-Chr3:145504 | 2.61E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45745 | PF00204 | DNA_gyraseB | 1.00E-54 | CL0329 | Cone | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0023 | K14492 | - | rcu:8279885 | 231.876 |