Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0080 | ATGGCGGATTACCTTCTTCTCTTCTTCATCTGGATACTTTCCACCCTCATTATCCGTACCATCTTAACCAAACTTCAATCCAAGAAGAAGCCTCGTCTTCCACCAGGCCCCCTAGCCCTACCAGTCATAGGCCACCTCCACCTCCTCGGTCCATTACCTCACCAGTCTCTCCACAAACTCTCATCCCGTCACGGCCCGTTAATTCACCTCTTTCTCGGCTCCGTCCCATGCGTCGTCGCTTCATCTGCTGAAACCGCCAAACAGTTCCTCAAAACGTACGAATCCTCCTTCTCTAACCGCCCCCAAATCTCCGCCGTCGATTACCTCACCTACAACTCCGCCGATTTCTCCTTCGCGCCATACGGACCGTACTGGAAGTTCATGAAGCAGCTCGTCGTCTCCGAGCTTCTCGGCGGCCAAACGCTGAATCAACTTCTTCCCATCCGGCGAGACGAGCTGAAGCGGTTTTTGCACGCGATTCTGCAGCGATCTCAAACCGGCCAAGAAATCGACGTCGGAGGAGCGCTCGTTAGGGTTTCGAATAACGTGATATCGAGAATGATGATGAGTACAAGATGTTCAGAGGACGAAAATGAAGCCGATGAGGTCAGGAAGCTAGTGAAGGACATCGCTGAACTTACAGGGACGTTTAACCTATCAGATTATATCTGGATCTGTAAAAACTTCGATTTGCAGGGGATGAAAAAGAGATTAAAGGAAGTTCGTGATCGATTCGATGGAATGATGGAGAGGATCATTAAGGAGCATGAAGAAATCAGGAAGAATAACAAGAATCGAGGTGGAGATCATGACGATAGTAACAGAGTGAAGGATCTGCTTCATATTCTGCTTGATGTGTATGAAGATCAGAATTCAGAGATGAAGTTGACCAGAGAGAACATCAAGGCCTTCATTCTGGACATATTTGCAGCGGGGACGGACACTTCAGCAATAACAGCGGAATGGGCAATGGCAGAGCTGATAAACAATCCAAACATAATGCAAAAAGCTGTACAAGAAATCGAAACAGTAGTTGGGAAAAACAGAGTAGTAGAAGAGTCAGACATAGTCAACCTGCCTTACCTTCAAGCCATAGTGAAAGAGACCTTAAGGCTTCACTCAAGCCCAATGATAGTGAGAGAATCCTCAGAGGACTGTACTGTTAATGGGTTTGACATCCCAGCTAAAACCCAATTGTTTGTGAACGTTTGGGCCATCGGGCGGGACCCAGAGAATTGGGAAAGCCCACTTGAGTTTGACCCAGATAGGTTCATTGAAGGGGAGAAAAAGAAGTTTGATGTGAGAGGGCAGCATTTTGAGTTATTGCCGTTTGGGAGTGGAAGAAGAGGTTGCCCTGCAACTTCACTTGCTTTGCAGTTTGTTCATACTAGTTTAGGTGCTATGATTCAATGCTTTGAATGGAGGGTTAAAGGAGGTCAAAATGTTAGTATGGAAGAAGGAGGAGGGTTGACTCTTCCTAGGGCTTCTCCCCTCATGTGTTTCCCTGTCCCTAGGCTCAACCCTTTTCCTTCTTTTTGA | 1539 | 47.04 | MADYLLLFFIWILSTLIIRTILTKLQSKKKPRLPPGPLALPVIGHLHLLGPLPHQSLHKLSSRHGPLIHLFLGSVPCVVASSAETAKQFLKTYESSFSNRPQISAVDYLTYNSADFSFAPYGPYWKFMKQLVVSELLGGQTLNQLLPIRRDELKRFLHAILQRSQTGQEIDVGGALVRVSNNVISRMMMSTRCSEDENEADEVRKLVKDIAELTGTFNLSDYIWICKNFDLQGMKKRLKEVRDRFDGMMERIIKEHEEIRKNNKNRGGDHDDSNRVKDLLHILLDVYEDQNSEMKLTRENIKAFILDIFAAGTDTSAITAEWAMAELINNPNIMQKAVQEIETVVGKNRVVEESDIVNLPYLQAIVKETLRLHSSPMIVRESSEDCTVNGFDIPAKTQLFVNVWAIGRDPENWESPLEFDPDRFIEGEKKKFDVRGQHFELLPFGSGRRGCPATSLALQFVHTSLGAMIQCFEWRVKGGQNVSMEEGGGLTLPRASPLMCFPVPRLNPFPSF | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 461130 | 462803 | + | Conep03aG0008200.1 | Cone3ag0080 | 433539 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0080 | 512 | Coils | Coil | 231 | 251 | - | - | |
Cone3ag0080 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cone3ag0080 | 512 | Gene3D | Cytochrome P450 | 19 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | CDD | CYP93 | 65 | 502 | - | - | |
Cone3ag0080 | 512 | SUPERFAMILY | Cytochrome P450 | 27 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | Pfam | Cytochrome P450 | 34 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone3ag0080 | 512 | FunFam | Cytochrome P450 family protein | 25 | 500 | - | - | |
Cone3ag0080 | 512 | PANTHER | CYTOCHROME P450 93A3-LIKE | 10 | 505 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0324 | Cone-Chr17:1529102 | Cone3ag0080 | Cone-Chr3:461130 | 2.06E-142 | dispersed | |
Cone1ag0672 | Cone-Chr1:6300483 | Cone3ag0080 | Cone-Chr3:461130 | 4.05E-167 | dispersed | |
Cone20ag1085 | Cone-Chr20:7526554 | Cone3ag0080 | Cone-Chr3:461130 | 1.21E-140 | dispersed | |
Cone3ag0080 | Cone-Chr3:461130 | Cone5ag1178 | Cone-Chr5:5287006 | 1.13E-119 | dispersed | |
Cone4ag1063 | Cone-Chr4:9247254 | Cone3ag0080 | Cone-Chr3:461130 | 1.71E-53 | dispersed | |
Cone7ag1066 | Cone-Chr7:8134825 | Cone3ag0080 | Cone-Chr3:461130 | 9.30E-43 | dispersed | |
Cone10ag0065 | Cone-Chr10:384058 | Cone3ag0080 | Cone-Chr3:461130 | 1.00E-105 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0080 | K24188 | - | rcu:8277508 | 686.411 |