Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0080 ATGGCGGATTACCTTCTTCTCTTCTTCATCTGGATACTTTCCACCCTCATTATCCGTACCATCTTAACCAAACTTCAATCCAAGAAGAAGCCTCGTCTTCCACCAGGCCCCCTAGCCCTACCAGTCATAGGCCACCTCCACCTCCTCGGTCCATTACCTCACCAGTCTCTCCACAAACTCTCATCCCGTCACGGCCCGTTAATTCACCTCTTTCTCGGCTCCGTCCCATGCGTCGTCGCTTCATCTGCTGAAACCGCCAAACAGTTCCTCAAAACGTACGAATCCTCCTTCTCTAACCGCCCCCAAATCTCCGCCGTCGATTACCTCACCTACAACTCCGCCGATTTCTCCTTCGCGCCATACGGACCGTACTGGAAGTTCATGAAGCAGCTCGTCGTCTCCGAGCTTCTCGGCGGCCAAACGCTGAATCAACTTCTTCCCATCCGGCGAGACGAGCTGAAGCGGTTTTTGCACGCGATTCTGCAGCGATCTCAAACCGGCCAAGAAATCGACGTCGGAGGAGCGCTCGTTAGGGTTTCGAATAACGTGATATCGAGAATGATGATGAGTACAAGATGTTCAGAGGACGAAAATGAAGCCGATGAGGTCAGGAAGCTAGTGAAGGACATCGCTGAACTTACAGGGACGTTTAACCTATCAGATTATATCTGGATCTGTAAAAACTTCGATTTGCAGGGGATGAAAAAGAGATTAAAGGAAGTTCGTGATCGATTCGATGGAATGATGGAGAGGATCATTAAGGAGCATGAAGAAATCAGGAAGAATAACAAGAATCGAGGTGGAGATCATGACGATAGTAACAGAGTGAAGGATCTGCTTCATATTCTGCTTGATGTGTATGAAGATCAGAATTCAGAGATGAAGTTGACCAGAGAGAACATCAAGGCCTTCATTCTGGACATATTTGCAGCGGGGACGGACACTTCAGCAATAACAGCGGAATGGGCAATGGCAGAGCTGATAAACAATCCAAACATAATGCAAAAAGCTGTACAAGAAATCGAAACAGTAGTTGGGAAAAACAGAGTAGTAGAAGAGTCAGACATAGTCAACCTGCCTTACCTTCAAGCCATAGTGAAAGAGACCTTAAGGCTTCACTCAAGCCCAATGATAGTGAGAGAATCCTCAGAGGACTGTACTGTTAATGGGTTTGACATCCCAGCTAAAACCCAATTGTTTGTGAACGTTTGGGCCATCGGGCGGGACCCAGAGAATTGGGAAAGCCCACTTGAGTTTGACCCAGATAGGTTCATTGAAGGGGAGAAAAAGAAGTTTGATGTGAGAGGGCAGCATTTTGAGTTATTGCCGTTTGGGAGTGGAAGAAGAGGTTGCCCTGCAACTTCACTTGCTTTGCAGTTTGTTCATACTAGTTTAGGTGCTATGATTCAATGCTTTGAATGGAGGGTTAAAGGAGGTCAAAATGTTAGTATGGAAGAAGGAGGAGGGTTGACTCTTCCTAGGGCTTCTCCCCTCATGTGTTTCCCTGTCCCTAGGCTCAACCCTTTTCCTTCTTTTTGA 1539 47.04 MADYLLLFFIWILSTLIIRTILTKLQSKKKPRLPPGPLALPVIGHLHLLGPLPHQSLHKLSSRHGPLIHLFLGSVPCVVASSAETAKQFLKTYESSFSNRPQISAVDYLTYNSADFSFAPYGPYWKFMKQLVVSELLGGQTLNQLLPIRRDELKRFLHAILQRSQTGQEIDVGGALVRVSNNVISRMMMSTRCSEDENEADEVRKLVKDIAELTGTFNLSDYIWICKNFDLQGMKKRLKEVRDRFDGMMERIIKEHEEIRKNNKNRGGDHDDSNRVKDLLHILLDVYEDQNSEMKLTRENIKAFILDIFAAGTDTSAITAEWAMAELINNPNIMQKAVQEIETVVGKNRVVEESDIVNLPYLQAIVKETLRLHSSPMIVRESSEDCTVNGFDIPAKTQLFVNVWAIGRDPENWESPLEFDPDRFIEGEKKKFDVRGQHFELLPFGSGRRGCPATSLALQFVHTSLGAMIQCFEWRVKGGQNVSMEEGGGLTLPRASPLMCFPVPRLNPFPSF 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 461130 462803 + Conep03aG0008200.1 Cone3ag0080 433539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0080 512 Coils Coil 231 251 - -
Cone3ag0080 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone3ag0080 512 Gene3D Cytochrome P450 19 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 CDD CYP93 65 502 - -
Cone3ag0080 512 SUPERFAMILY Cytochrome P450 27 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 Pfam Cytochrome P450 34 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag0080 512 FunFam Cytochrome P450 family protein 25 500 - -
Cone3ag0080 512 PANTHER CYTOCHROME P450 93A3-LIKE 10 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0324 Cone-Chr17:1529102 Cone3ag0080 Cone-Chr3:461130 2.06E-142 dispersed
Cone1ag0672 Cone-Chr1:6300483 Cone3ag0080 Cone-Chr3:461130 4.05E-167 dispersed
Cone20ag1085 Cone-Chr20:7526554 Cone3ag0080 Cone-Chr3:461130 1.21E-140 dispersed
Cone3ag0080 Cone-Chr3:461130 Cone5ag1178 Cone-Chr5:5287006 1.13E-119 dispersed
Cone4ag1063 Cone-Chr4:9247254 Cone3ag0080 Cone-Chr3:461130 1.71E-53 dispersed
Cone7ag1066 Cone-Chr7:8134825 Cone3ag0080 Cone-Chr3:461130 9.30E-43 dispersed
Cone10ag0065 Cone-Chr10:384058 Cone3ag0080 Cone-Chr3:461130 1.00E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0080 K24188 - rcu:8277508 686.411