Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0091 ATGTTTTCATGGCTGGCAAGGATCGCGTTTTCTTGTTGGATGCCGGTAAGAAGGTATGCCCGTACGAGCAAGGATGAAGATTCTGACCAGCAAGATTCCTCCTCCTCCTTTTCTCCGCAGGATAATCTTTTATGGTTCCGAGACCTTGAAAAGCACTCGTATGGCGACTTCTCCTTTGCGGTGGTTCAGGCCAATGAGGTCATTGAGGATCACAGCCAGGTCGAGACTGGTCGTGAAGGTATCTTCGTCGGAGTTTATGACGGCCATGGTGGGCCCGAGGCATCTCGATTCATCTCCGACCACCTCTTTCGCCATCTAATGAGGCATGCCCGAGAAAACGGAACCATATCAGAAGAAGTACTTAAAAGCGCCTTTTCTGCAACAGAAGAGGGCTTTCTTACTCTTGTCCGTAGGTCGTGGGGAATAAAACCGGTGATCGCAGCAATGGGCTCTTGCTGTTTAGTGGGGGTCATATACAGAGGGACACTATACATAGCTAATGTAGGTGACTCAAGAGCCGTGATTGGTTCCTTAGGCAAATCTAATAAGATGGTAGCCGAGCAGTTAACTAGAGAACATAACGCAAGCATGGAGGACGTTAGACAAGAACTCAGGTCATTACACCCAGATGATTCCCACATCGTTGTTTTAAAGCACGGAGTTTGGCGTATTAAAGGAATAATTCAGGTATCAAGGTCCATAGGCGATGCATACTTGAAGAAGCCGGAATTCTCTCTAGATCCTTCTTTTCCAAGATTCCATCTTTCGGAACCAATACGCCGGCCCGTTCTAACTGCCGAACCGACATTAAACATTAGAGTATTACAACCGAATGATAAATTTCTCATATTTGCATCAGACGGTCTTTGGGAGCACATTACTAATCAAGAGGCTGTTGAGATCGTTCATAACGGCCCGCGGCGAGGAATTGCAAGGAGACTTGCGAAAAGGGCTCTGAACGAGGCAGCGAAGAAGAGGGAGATAAGATATGATGATCTAAATAAGGTGGAGAAGGGTGTTAGGAGATTCTTTCACGATGACATAACTGTGGTGGTTGTCTTTTTAGACAACGAGTTGCCGGGAAGTATGATATCCGTGCCAGAGTTGTCGATCAGAGGGTACAATGACACTGTGGGACCCTCTAGTTTCAACATTGTCTGA 1161 46.68 MFSWLARIAFSCWMPVRRYARTSKDEDSDQQDSSSSFSPQDNLLWFRDLEKHSYGDFSFAVVQANEVIEDHSQVETGREGIFVGVYDGHGGPEASRFISDHLFRHLMRHARENGTISEEVLKSAFSATEEGFLTLVRRSWGIKPVIAAMGSCCLVGVIYRGTLYIANVGDSRAVIGSLGKSNKMVAEQLTREHNASMEDVRQELRSLHPDDSHIVVLKHGVWRIKGIIQVSRSIGDAYLKKPEFSLDPSFPRFHLSEPIRRPVLTAEPTLNIRVLQPNDKFLIFASDGLWEHITNQEAVEIVHNGPRRGIARRLAKRALNEAAKKREIRYDDLNKVEKGVRRFFHDDITVVVVFLDNELPGSMISVPELSIRGYNDTVGPSSFNIV 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 529818 532593 + Conep03aG0009300.1 Cone3ag0091 433550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0091 386 SUPERFAMILY PP2C-like 61 357 IPR036457 -
Cone3ag0091 386 CDD PP2Cc 54 355 IPR001932 -
Cone3ag0091 386 SMART PP2C_4 50 353 IPR001932 -
Cone3ag0091 386 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Cone3ag0091 386 ProSitePatterns PPM-type phosphatase domain signature. 82 90 IPR000222 GO:0043169(InterPro)
Cone3ag0091 386 ProSiteProfiles PPM-type phosphatase domain profile. 56 355 IPR001932 -
Cone3ag0091 386 PANTHER PROTEIN PHOSPHATASE 48 354 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone3ag0091 386 FunFam Probable protein phosphatase 2C 42 47 362 - -
Cone3ag0091 386 Gene3D - 26 360 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0091 Cone-Chr3:529818 Cone8ag1300 Cone-Chr8:10628497 2.22E-143 dispersed
Cone10ag0077 Cone-Chr10:444149 Cone3ag0091 Cone-Chr3:529818 1.65E-264 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0091 K01102 - csv:101222146 616.69