Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag0170 | ATGTGGGCAAATGCAGAAGGAGGCCCTCCCGAGGTGACTCTAGAAACTTCTATGGGAGCTTTCACAGTTGAGCTGTACTTCAAACACGCACCGAGAACTTGCAGGAACTTCATCGAACTCTCTCGCAGAGGCTATTACGACAATGTTAAGTTCCACAGAATCATCAAGGATTTTATTGTGCAAGGTGGAGATCCTACAGGGACAGGAAGAGGTGGAGAATCCATTTACGGGAAGAAGTTTGAGGATGAAATAAAGCCGGAGTTGAAGCACACAGGGGCTGGGATTTTATCAATGGCAAATGCCGGTCCGAATACGAACGGAAGCCAGTTCTTTATCACCCTTGCACCTTGTCCGTCTCTGGATGGAAAACACACTGTTTTCGGAAGAGTTTGCTGGGGAATGGAGATTATCAAAAGGCTTGGCAGTGTCCAAACCGATAACAATGATAGGCCCATACATGATGTTAAGATACTGCGAACATCAGTGAAAGACTAA | 495 | 46.06 | MWANAEGGPPEVTLETSMGAFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTVFGRVCWGMEIIKRLGSVQTDNNDRPIHDVKILRTSVKD | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 915157 | 917389 | + | Conep03aG0017300.1 | Cone3ag0170 | 433629 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag0170 | 164 | PIRSF | Peptidylpro_ismrse | 3 | 164 | IPR024936 | GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | FunFam | Peptidyl-prolyl cis-trans isomerase | 2 | 164 | - | - | |
| Cone3ag0170 | 164 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 162 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | SUPERFAMILY | Cyclophilin-like | 11 | 162 | IPR029000 | - | |
| Cone3ag0170 | 164 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 9 | 160 | IPR044666 | GO:0000413(PANTHER)|GO:0003755(PANTHER)|GO:0071013(PANTHER) | |
| Cone3ag0170 | 164 | Gene3D | - | 3 | 164 | IPR029000 | - | |
| Cone3ag0170 | 164 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755(InterPro)|GO:0006457(InterPro) | |
| Cone3ag0170 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 121 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) | |
| Cone3ag0170 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 137 | IPR002130 | GO:0000413(InterPro)|GO:0003755(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1362 | Cone-Chr11:9917404 | Cone3ag0170 | Cone-Chr3:915157 | 1.48E-52 | dispersed | |
| Cone18ag0216 | Cone-Chr18:1066762 | Cone3ag0170 | Cone-Chr3:915157 | 3.31E-51 | dispersed | |
| Cone20ag1007 | Cone-Chr20:7061604 | Cone3ag0170 | Cone-Chr3:915157 | 2.97E-22 | dispersed | |
| Cone3ag0170 | Cone-Chr3:915157 | Cone6ag1459 | Cone-Chr6:11655955 | 4.97E-51 | dispersed | |
| Cone10ag0151 | Cone-Chr10:758104 | Cone3ag0170 | Cone-Chr3:915157 | 6.08E-35 | wgd | |
| Cone13ag0425 | Cone-Chr13:3905146 | Cone3ag0170 | Cone-Chr3:915157 | 1.54E-16 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag0170 | K12733 | - | csv:101222111 | 325.479 |