Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0198 ATGGTGATGACCAAAGAGAAGAAGGAGAATTCTGGTCACTTTCTCTTCCTCATTCTCTTCTTCTTCTTCTCTTCCTTTTCTTCCCTTTCCTCTTCTTCTCATTTACCTCCTCTAAACGATACCGTTGCTCTCACCAACTTCCGTCTCCTCACAGATACACACGGCAACCTACTCTCCAACTGGACCGGCCCTGACGCCTGCTCCGCCAACTGGCACGGCGTTCGCTGCTCCTCCACCGGCCGTGTCACCGGCCTCTCCCTTCCTTCCCTAAACCTCCGAGGACCCATTCTCTCCCTCTCACCACTCGACGAGCTCCGCCTCCTTGACCTCCATGACAACCGCTTAAACGGCACAATCACACCACTCACTAACTGCACCAACTTAGTCCTCATCTACCTCGCCGGAAACGACTTATCAGGCGAGATCCCACAGCAAATATCCTCCTTGAAAACTCTCACCCGCCTCGACCTTTCAAATAACAACATCCATGGCTCTATCCCTGACCAGTTATCTCATCTCACTCTTCTCCTCACTCTTCGTTTGCAGAACAATTTACTTTCCGGAAAAATCCCAGATTTCTCTGGCTTTCTAACCAATCTTAAGGACCTCAATCTAACCAACAACGAGCTTAGCGGAAAACTACCGGACGGTTTATTATCAAAATTCGGTTACAAAAGCTTTTCTGGAAATGAAGGGCTATGTGGGTCTGGGGCCGGGGCTGGACTGATCCCGTTACAAGTTTGTACCCCATCACCATCATCTATAAACAATTCAGCTGAAAAAACTCTCCCATTAAAACCAAACTCGTTTCCTCAAAAGCCCCTGCTTAGCCGGACAGATGGACAAAATCATAAAGGGCTAAAACCCGGAGAAATAGTCGCAATCGTGATCGCTATGTCCGTGGCATTGTTGGTAACTATCTCCTTCTTCGTGGCCTATTGCTGCGCAAAAGACCGGAACAATTCAAATTCAAATCACGGGAGTGAAGTAGGGAAGAGGAGAAGTTATGGAAGTAGTAGTAATGGGAGCGAGAAGAAGGTCTACTCAAACGGAGATGGAGATAGTGATGGGACAAATGTTACGGACCGGAGTAAGCTCGTGTTTTTCGACCGGAAGAAGGGATTTGAGCTGGAAGACCTGCTCCGAGCATCGGCTGAGATGGTTGGAAAAGGGAGCCTTGGGACGGTATATAGGGCTGCGCTAGATGATGGGTGCACTGTAGCAGTTAAGAGATTGAAAGACGCGAACCCATGTGGGAGAAAGGAGTTTGAGGAGTATATGGAGATAATTGGGAGGGTAAGGGATAAGCATATTGCAAGGCTTAGAGCTTACTATTATGCTAAGGAAGAGAAGCTTCTTGTTTATGACTTCCTCTCTAATGGGAGCTTGCATTCTCTTCTCCATGGGAATAGGGGACCTGGAAGAGTTCCATTGGATTGGACTACAAGAATAAGCTTGGTCTTAGGAGCTGCTCGTGGGCTTTCTAGGATCCATGAAGAGTACAGTGAATCGAAAATACCACACGGAAATGTGAAATCTTCAAACGTCCTACTCGACAAGAATGGTGTGGCGTGCATTTCAGATTTCGGGCTGTCTCTACTTCTCAGCCCGGCCCATGCCATAGCAAGACTAGGAGGCTACAAAGCACCCGAACAATCCGAAACAAAGAAGCTTTCTCAGGAAGCGGATGTGTACAGCTTTGGTATCCTGTTATTAGAAGTGCTTACTGGCCGATTTCCTTCTCTACGGGCCGGTGGAGATGACCCGGCATTGGACCTTCCGAAGTGGGTCCGGTCTGTGGTGAAGGAAGAATGGACAGCTGAAGTGTTTGATCAAGAGCTTTTGAGGTACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTCCACTTGGGCTTGGCCTGTGTGGCTGAGCAGCCAGAAAAGAGGCCCATTATGGCAGAAGTTGCTAAGATGATCGCCGAAATAAGGGTCGAGCAATCTCCTCTCGGTGAAGAACAGGATGAGTCTCGAAACTCCCTTTCGCCTTCTATCCCGACTACTGATGATGGGCTGGTTTGA 2058 48.35 MVMTKEKKENSGHFLFLILFFFFSSFSSLSSSSHLPPLNDTVALTNFRLLTDTHGNLLSNWTGPDACSANWHGVRCSSTGRVTGLSLPSLNLRGPILSLSPLDELRLLDLHDNRLNGTITPLTNCTNLVLIYLAGNDLSGEIPQQISSLKTLTRLDLSNNNIHGSIPDQLSHLTLLLTLRLQNNLLSGKIPDFSGFLTNLKDLNLTNNELSGKLPDGLLSKFGYKSFSGNEGLCGSGAGAGLIPLQVCTPSPSSINNSAEKTLPLKPNSFPQKPLLSRTDGQNHKGLKPGEIVAIVIAMSVALLVTISFFVAYCCAKDRNNSNSNHGSEVGKRRSYGSSSNGSEKKVYSNGDGDSDGTNVTDRSKLVFFDRKKGFELEDLLRASAEMVGKGSLGTVYRAALDDGCTVAVKRLKDANPCGRKEFEEYMEIIGRVRDKHIARLRAYYYAKEEKLLVYDFLSNGSLHSLLHGNRGPGRVPLDWTTRISLVLGAARGLSRIHEEYSESKIPHGNVKSSNVLLDKNGVACISDFGLSLLLSPAHAIARLGGYKAPEQSETKKLSQEADVYSFGILLLEVLTGRFPSLRAGGDDPALDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHLGLACVAEQPEKRPIMAEVAKMIAEIRVEQSPLGEEQDESRNSLSPSIPTTDDGLV 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1023787 1026040 - Conep03aG0020300.1 Cone3ag0198 433657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0198 685 Gene3D Phosphorylase Kinase; domain 1 357 457 - -
Cone3ag0198 685 Gene3D Transferase(Phosphotransferase) domain 1 458 676 - -
Cone3ag0198 685 MobiDBLite consensus disorder prediction 258 283 - -
Cone3ag0198 685 MobiDBLite consensus disorder prediction 659 685 - -
Cone3ag0198 685 PRINTS Leucine-rich repeat signature 197 210 - -
Cone3ag0198 685 PRINTS Leucine-rich repeat signature 152 165 - -
Cone3ag0198 685 MobiDBLite consensus disorder prediction 322 357 - -
Cone3ag0198 685 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 458 666 - -
Cone3ag0198 685 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0198 685 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Cone3ag0198 685 SUPERFAMILY L domain-like 38 220 - -
Cone3ag0198 685 ProSiteProfiles Leucine-rich repeat profile. 151 174 IPR001611 GO:0005515(InterPro)
Cone3ag0198 685 Gene3D Ribonuclease Inhibitor 120 239 IPR032675 -
Cone3ag0198 685 FunFam Nuclear pore complex protein NUP107 38 192 - -
Cone3ag0198 685 SUPERFAMILY Protein kinase-like (PK-like) 386 652 IPR011009 -
Cone3ag0198 685 CDD STKc_IRAK 388 655 - -
Cone3ag0198 685 PANTHER OS05G0588300 PROTEIN 12 666 IPR050994 -
Cone3ag0198 685 Pfam Protein tyrosine and serine/threonine kinase 386 650 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0198 685 Gene3D Ribonuclease Inhibitor 38 119 IPR032675 -
Cone3ag0198 685 Pfam Leucine Rich Repeat 199 218 IPR001611 GO:0005515(InterPro)
Cone3ag0198 685 Pfam Leucine Rich Repeat 152 173 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1206 Cone-Chr19:8418148 Cone3ag0198 Cone-Chr3:1023787 1.35E-243 dispersed
Cone3ag0198 Cone-Chr3:1023787 Cone3ag0485 Cone-Chr3:2368876 6.83E-109 dispersed
Cone10ag0190 Cone-Chr10:933889 Cone3ag0198 Cone-Chr3:1023787 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82650 PF01201 Ribosomal_S8e 3.30E-46 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0198 - - - 0.0