Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0209 | ATGGCTTCCTTTTCTGCAACTAGTGAAATTGTGGAAGCAAGTGAAGAAACATATCCGGGTCAACCTTCCATGGAGTCATATAGAATGAGATACGGATCAGCTGTCAAAGAAGGGAAGCTTCCAATGGTAGGGTACAATAATTTTCTTGAGGAAGATCTTAATCACCTTTTTGAGGCCATCAATCTTAAAGACTTTTCGAAGAGTGAAGGGGGGCTTTCCCAACCACGGACAAGCCCTATGAGGAAAAGTGCATTAAAAAGGCCAATTGCATTGCCTCGTTCACCGGGAATTGGGATTTCTGAACAGGTTAATCTGAAACAAGCATTAAGAGAACTCTGCCTTTCAAAGGCATCAGAAATGGCAGCTACTAAACGGTTATCGAAATCAAGACCTTCAGGTGCATCAGAAGCTGGACGTATTAAGACGTTGTACAATTCTGTTGTGATTGAAGCAAGTCGGTCTAGTACTTCACTAGATAAAGAGGGCAAGGGGAGTATGGTTGAAATATCCCTAGTTCCAGAGGACAGCTTATCCAAACCCGTGAAAAATGATAACCTTAAAATACACACAGTCAAATCCCCGACCAGAAGTCCTCGTTTGTCCCCCCGATCAGTCGTTATGACATCACAAAGCTCTAACGAGATTACAGAAGAGGAAAGCGATATTGTTCACAGACCAAAGAAACTCGGGGCTCAAACATTGAAGGAAGAACTGGCACGGAAAGAGAAAGATGCATCCCCTCCTTCTGCTTCCTCTTCTAATACTATTCGCAATGTATTAGTGCAGGATGAGGCTACCCCTGCCTCAAGCAAGTTAGCAAATAAAGCATCATCATCAAAGCCAGGTAGGAAAGGCAGGTTGCAAACTGTAGCTTCATCGGTCAGTGGAAACAGGGTTAGCAGATTCTCGAGAAATACTGCTAGGACAGTTAAACCAGTTATCAGGAACAAAGCACTTGCAAAGAAGAAAGTAAAACAGGAATCAACCATCGATATCTGTTCTTCTAGCACACAGAATGTAGCGACTGAAACAGTGAATCCTAGTGCAAAACCTTTGATATGTGAGAGATGCCAGTGCGCAATAAAGAGTGCAGGTAATGAATCAAAAGAAATTTATTCAGAATCAAAATTTAACAGTGTTGGGGCCGAAGTAAGCTTGATGAATAATGGGAAGTCTGGTTCAGGCAAAGATGCTGTGCTGAAAGGAAAAAGGAACATGAAAATGCAAGAAAAGGGTGAGTTTTCCCAAAGCTCAAAAAGCAGTCACGGGGAGTACAGCAGCAGCACTACAAGTATCAGTGAGGAAAGCAATGCAAGTAGGTCTAGCTGTGGGAACAGACCCCATATGTCGAAAGATGTGAGGTGGGAAGCAATCCGTCAGGTTCGGAGGCAGAGTGGGACCCTCAGGTTGACCCACTTCAATCTGTTGAAGAAGCTGGGTTGTGGAGATATTGGAACTGTATATCTGGCCGAATTAGTTGGTACAAATTGCGTATTTGCTATAAAAGTGATGGACAATGAGTTCTTAGCAAGGAGAAAGAAGATGCCAAGGGCTCAGACAGAGAGAGAAATACTTAGAATGCTTGACCATCCTTTTCTCCCTACGCTTTATTCTCAGTTTACATCGGATAACCTGTCTTGTCTTGTCATGGAGTATTGTCCGGGAGGAGACCTTCATGTCCTTAGGCAGAAGCAGCTTGGCAGGGTATTCTCTGAGCCAGCAGCAAGATTTTATGTAGCAGAAGTCCTCCTTGCTTTGGAGTACTTACACATGCTTGGAGTTGTTTATCGAGATTTGAAACCAGAGAACATTCTCGTACGAGAAGATGGTCACATTATGCTCACTGACTTTGACCTCTCACTCCGATGCACAGTCAATCCAACTCTCCTAAAATCTTCTTCATTCAACCTAGATCCAGTAAGAATATCCGGTCCGTGCACAGGATCCACTTGTGCCGAGCCCTTTTGCATTGAACCAGCCTGTCAAGTTCCGTGCTTCAGCCCGAGATTCTTACCTAACGCCACCAAAGCAAGAAAGTTAAAATCCGACCTTTCAATTCCAACGAGATCATTGCCCCAGCTGGTTGCGGAGCCCACTGAAGCTCGATCGAATTCCTTTGTCGGGACCCACGAGTACTTGGCCCCCGAAATCATTAAAGGAGAGGGTCACGGAGCAGCAGTTGATTGGTGGACATTTGGGGTGTTTCTTTACGAGCTTTTGTATGGGAAAACACCGTTCAAAGGCCCCAGTAACGACGAGACATTGGCCAATGTGGTTTTGCAGGGCCTGAAATTTCCGGACAGCCCACTTGTTAGTTTCCAGGCGAGGGACCTTATCCGAGGCCTGTTGGTGAAGGAGCCCGAGAATCGATTTGGGTCTGAGAAAGGTGCGGCTGAGATTAAACAGCATCCCTTTTTTGAAGGCTTGAACTGGGCCTTGATAAGGTGTGCTGTTCCACCAGATCTGCCTGATCAGTTCTGTGATTTTGATGTTACAAACTTTGCTGCTGCTCAGCAAAACTACAGCAAGTACTTGGATTACAAGGCTAACGGAGAACACGTAGAGTTCGAGTTGTTTTAG | 2580 | 44.88 | MASFSATSEIVEASEETYPGQPSMESYRMRYGSAVKEGKLPMVGYNNFLEEDLNHLFEAINLKDFSKSEGGLSQPRTSPMRKSALKRPIALPRSPGIGISEQVNLKQALRELCLSKASEMAATKRLSKSRPSGASEAGRIKTLYNSVVIEASRSSTSLDKEGKGSMVEISLVPEDSLSKPVKNDNLKIHTVKSPTRSPRLSPRSVVMTSQSSNEITEEESDIVHRPKKLGAQTLKEELARKEKDASPPSASSSNTIRNVLVQDEATPASSKLANKASSSKPGRKGRLQTVASSVSGNRVSRFSRNTARTVKPVIRNKALAKKKVKQESTIDICSSSTQNVATETVNPSAKPLICERCQCAIKSAGNESKEIYSESKFNSVGAEVSLMNNGKSGSGKDAVLKGKRNMKMQEKGEFSQSSKSSHGEYSSSTTSISEESNASRSSCGNRPHMSKDVRWEAIRQVRRQSGTLRLTHFNLLKKLGCGDIGTVYLAELVGTNCVFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNLDPVRISGPCTGSTCAEPFCIEPACQVPCFSPRFLPNATKARKLKSDLSIPTRSLPQLVAEPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGPSNDETLANVVLQGLKFPDSPLVSFQARDLIRGLLVKEPENRFGSEKGAAEIKQHPFFEGLNWALIRCAVPPDLPDQFCDFDVTNFAAAQQNYSKYLDYKANGEHVEFELF | 859 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1113014 | 1116602 | - | Conep03aG0021500.1 | Cone3ag0209 | 433668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 217 | 244 | - | - | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 178 | 296 | - | - | |
Cone3ag0209 | 859 | PANTHER | FLIPPASE KINASE 1-RELATED | 306 | 830 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cone3ag0209 | 859 | FunFam | serine/threonine-protein kinase D6PK-like | 701 | 824 | - | - | |
Cone3ag0209 | 859 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 594 | 606 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone3ag0209 | 859 | Gene3D | Transferase(Phosphotransferase) domain 1 | 553 | 622 | - | - | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 246 | 296 | - | - | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 188 | 216 | - | - | |
Cone3ag0209 | 859 | SUPERFAMILY | Protein kinase-like (PK-like) | 446 | 825 | IPR011009 | - | |
Cone3ag0209 | 859 | FunFam | serine/threonine-protein kinase D6PK-like | 557 | 624 | - | - | |
Cone3ag0209 | 859 | FunFam | Serine/threonine-protein kinase D6PK-like | 471 | 556 | - | - | |
Cone3ag0209 | 859 | ProSiteProfiles | Protein kinase domain profile. | 473 | 806 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0209 | 859 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 552 | - | - | |
Cone3ag0209 | 859 | Gene3D | Phosphorylase Kinase; domain 1 | 825 | 838 | - | - | |
Cone3ag0209 | 859 | SMART | serkin_6 | 473 | 806 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 408 | 448 | - | - | |
Cone3ag0209 | 859 | MobiDBLite | consensus disorder prediction | 411 | 446 | - | - | |
Cone3ag0209 | 859 | Pfam | Protein kinase domain | 474 | 624 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0209 | 859 | Pfam | Protein kinase domain | 703 | 806 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0209 | 859 | CDD | STKc_phototropin_like | 471 | 824 | - | - | |
Cone3ag0209 | 859 | Gene3D | Transferase(Phosphotransferase) domain 1 | 701 | 824 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag1361 | Cone-Chr11:9912074 | Cone3ag0209 | Cone-Chr3:1113014 | 2.36E-224 | dispersed | |
Cone13ag1200 | Cone-Chr13:9287179 | Cone3ag0209 | Cone-Chr3:1113014 | 2.05E-290 | dispersed | |
Cone18ag0217 | Cone-Chr18:1076442 | Cone3ag0209 | Cone-Chr3:1113014 | 7.97E-231 | dispersed | |
Cone19ag1184 | Cone-Chr19:8299360 | Cone3ag0209 | Cone-Chr3:1113014 | 8.99E-293 | dispersed | |
Cone3ag0209 | Cone-Chr3:1113014 | Cone5ag1793 | Cone-Chr5:12725115 | 4.62E-179 | dispersed | |
Cone10ag0177 | Cone-Chr10:861393 | Cone3ag0209 | Cone-Chr3:1113014 | 0 | wgd | |
Cone11ag1025 | Cone-Chr11:8118512 | Cone3ag0209 | Cone-Chr3:1113014 | 7.87E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82652 | PF16421 | E2F_CC-MB | 6.20E-31 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0209 | - | - | - | 0.0 |