Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0258 ATGATCGGAAGGACCACTCTAGTCATTGCCCATCGCCTTTCTACAATTCGAAAAGCTGATCTCGTAGCCATAATTCAACAAGGGAGTGTTTCCGAAATCGGATCCCACGATGACCTCTTTGCCAAAGGCGAGAATGGAGTCTATGCCAAGCTTATCCAAATGCAAGAGACAGCCCACGAAAATGCCCTCAACAATGCTAGAAAGAGTAGTGCAAGGCCTTCTAGTGCAAGGAACTCATTAAGCTCACCCATAATAGCACGAAACTCCTCTTACGGAAGATCACCATATTCACGTCGATTATCAGATTTCTCCAGTTCGGATTTTAGTCTCTCTGTTGATGCATCACACCCTTACCAGCTCGAAAAGCTTCCGTTCAAAGAGCAGGCTAGTTCCTTCTGGCGCTTGGCAAAAATTAACAGACCCGAATGGATCTACGCACTAATCGGTTCTATCGGCTCTATCATTTGCGGCTCACTAAGCACTTTCTTTGCATAG 495 45.66 MIGRTTLVIAHRLSTIRKADLVAIIQQGSVSEIGSHDDLFAKGENGVYAKLIQMQETAHENALNNARKSSARPSSARNSLSSPIIARNSSYGRSPYSRRLSDFSSSDFSLSVDASHPYQLEKLPFKEQASSFWRLAKINRPEWIYALIGSIGSIICGSLSTFFA 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1358078 1358651 + Conep03aG0026400.1 Cone3ag0258 433717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0258 164 Gene3D ABC transporter type 1, transmembrane domain 80 164 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone3ag0258 164 Gene3D - 2 79 IPR027417 -
Cone3ag0258 164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 55 IPR027417 -
Cone3ag0258 164 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 55 IPR039421 GO:0015421(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0258 Cone-Chr3:1358078 Cone5ag0291 Cone-Chr5:1230611 2.42E-13 dispersed
Cone3ag0258 Cone-Chr3:1358078 Cone3ag0259 Cone-Chr3:1358853 7.23E-13 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0258 K05658 - vvi:100262262 238.039