Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0260 ATGGGAGGAAAGTGCCCTCACCGACACGTGAAGAAAAGGAGGTACTCTCACAAGACTGCTCGCCGCACGAAATTCCTCATCAAAGGAGATGATATGGTTTACCATGCGCTCCAGAAGCCAGATGAGAAGAACAATCCTTTACCTCTTGATGAAGATTTGCCTGGAATGGGCCAGTACTACTGCTTACACTGCGACCGATACTTTGCGAATGTGTCCACGAGGGATGAGCATTTCAAGACCAAACGCCATAGGAAGAAAGTAAAACAGATGATGGGTCCTGCACCACATACCCAACTGGATGCCGACTTGGCGGCAGGGATGGGCATGCCCGATAATGGTCCGACACTCATGTCTATGTGA 360 49.72 MGGKCPHRHVKKRRYSHKTARRTKFLIKGDDMVYHALQKPDEKNNPLPLDEDLPGMGQYYCLHCDRYFANVSTRDEHFKTKRHRKKVKQMMGPAPHTQLDADLAAGMGMPDNGPTLMSM 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1360451 1361437 - Conep03aG0026600.1 Cone3ag0260 433719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0260 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Cone3ag0260 119 MobiDBLite consensus disorder prediction 1 21 - -
Cone3ag0260 119 Gene3D Classic Zinc Finger 45 109 - -
Cone3ag0260 119 FunFam Zinc finger protein 593 45 109 - -
Cone3ag0260 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Cone3ag0260 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Cone3ag0260 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Cone3ag0260 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0260 K14821 - gmx:100499707 228.024