Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0280 | ATGATCTTTGTCCTTGTTTACTCCACCGCGGGAATTTCTGGCGGGCACATTAACCCGGCCGTGACTTTTGGGCTTTTCTTGGCCCGTAAGGTTTCGTTGATTCGGGCCGTTTTGGACATGGTACCCCAGTGTCGAGGGGTTTTTTGTGGGTGTGGGCTTGTGAAAGCGTTTCAGAAGAGTTATTATGATCGATACGGAGGTGGGGCCAATAAGCTTGCTGATGGGTACAGTAAAGGGACAGGATTAGGGGCTGAGATTATCGGAACATTTGTCCTTGTCTACACTGTTTTCTCGGCCACTGACCCGAAAAGGAACGCTAGAGACTCGCATGTTCCCGTTTTGGCGCCACTGCCAATTGGGTTCTCCGTATTCATTGTCCACTTGGCTACTATCCCGATCACCGGCACGGGAATCGTAAGGTTAAACATGCCTCAAATTCCAAATACTCCCAAGAGAACAAAACTTTCCCCTCTACGATTCCCCAATTTCACCAAAACCTTTGTGTCCCCAGAGCCCCTCTTCAGCCAGAAATAG | 534 | 49.44 | MIFVLVYSTAGISGGHINPAVTFGLFLARKVSLIRAVLDMVPQCRGVFCGCGLVKAFQKSYYDRYGGGANKLADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFSVFIVHLATIPITGTGIVRLNMPQIPNTPKRTKLSPLRFPNFTKTFVSPEPLFSQK | 177 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1462429 | 1463077 | + | Conep03aG0028600.1 | Cone3ag0280 | 433739 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0280 | 177 | ProSitePatterns | MIP family signature. | 16 | 24 | IPR022357 | - | |
Cone3ag0280 | 177 | PRINTS | Major intrinsic protein family signature | 120 | 142 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone3ag0280 | 177 | PRINTS | Major intrinsic protein family signature | 35 | 54 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone3ag0280 | 177 | PRINTS | Major intrinsic protein family signature | 84 | 102 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone3ag0280 | 177 | SUPERFAMILY | Aquaporin-like | 2 | 137 | IPR023271 | - | |
Cone3ag0280 | 177 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 138 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cone3ag0280 | 177 | Gene3D | Glycerol uptake facilitator protein. | 1 | 140 | IPR023271 | - | |
Cone3ag0280 | 177 | Pfam | Major intrinsic protein | 1 | 138 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0280 | Cone-Chr3:1462429 | Cone5ag1231 | Cone-Chr5:5673499 | 2.83E-83 | dispersed | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone3ag0280 | Cone-Chr3:1462429 | 1.05E-77 | wgd | |
Cone10ag0252 | Cone-Chr10:1213414 | Cone3ag0280 | Cone-Chr3:1462429 | 2.24E-84 | wgd | |
Cone18ag0517 | Cone-Chr18:2534956 | Cone3ag0280 | Cone-Chr3:1462429 | 5.40E-82 | wgd | |
Cone3ag0280 | Cone-Chr3:1462429 | Cone5ag0337 | Cone-Chr5:1440129 | 2.85E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0280 | K09872 | - | cit:102609769 | 254.218 |