Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0284 ATGGCCGGCGGCGGTGATTCCTCGTCTGCAATCTCGCTAGAACACACTCCCACCTGGGCACTCGCCGTCGTTTGCTTCGTCTTCATCTCCATGTCCCTTGCCATCGAGCATTTCATCCATCTTCTCACTAATTGGCTGAAGAAACATAGGAGAACTGCTCTGTGTGAGGCGGTGGAGAAGCTGAAATCAGAGTTGATGCTTGTGGGATTTATATCACTGTTATTGGCAGCAACACAAGGGCGGATATCCAAGATATGCGTATCTACACAGGCTGCTGAGATCATGCTTCCATGTCGTAAACAGAATGATATTCAACTGGCCGTTGTTAATCACTACGAGCACCTTGTTATCAGCAAGATGATGGGTCGAATATTGGCAGATGATGATGAAAGTAATAGTACGTCTGATTCTGGTGCAGTTGCTTCCGATTCTTGCAGTGAACAAGGGAAGGTTGCATTGATGACACAAGACGGAATTCATCAGCTTCACATATTCATTTTTGTGCTGGCTTTGATGCACATCGTTTACAGTGTTCTCACCATCGCATTGGGCCGGGCCAAGATGAGGCGCTGGAAAGCTTGGGAGAACGAGACTCAGACGACCGAGTATGAAGTTGCGAATGACCCGAACCGGTTCAGATTTGCAAGACAAACTACTTTCGGAAGACGCCACATGACTTCAAAATCGACTCTCCATCTCTGGATTAAATGTTTTTTCAGACAGTTCTTTCATTCAGTGGCAAAAGTTGATTATTTAACGCTCAGACACGGCTTTATCTCGGCTCACTTCTCTTCATCTGGAGGCAACAGCTTCGATTTCCAAAAATATATACAACGATCTTTAGATGAAGATTTCAAGTCTGTGGTCGGCATCAGCCCTCTAATGTGGTTTGTAGTTGTCATCCTCCTCCTTCTGGATGTGTACGGATGGAACGTATTTGTTTCGTTATCCTATATTCCTCTCTTCATTGTGCTGATTGTGGGAGCTAAGCTTGAAGTAATTGTGGAGAGAATGGCTCTTCAAATCAAAGATCTGAACAGTGTGATTATTGGAGCTCCTCTTGTTAAACCAAGTGATAAATTGTTTTGGTTTGGCTACCCTAAATTGGTCTTAGTTCTGCTGCATTATACTCTCTTCGTGAATGCATTCGAGCTGGCCTTTTTCATCTGGGCTACGATACAATTTGGTTACGGTACTTGTTTCAATGAACAAACTGCAAGCATTATAGTAAGGCTGGTCTTAGCAATTACAGTTCAATTCCTATGCACCTACATTACTCTTCCCTTATATGCTCTTGTAACACAAATGGGTTCGGAATTCAAGAGGAAGGCGATGGAAGATCAGATGACGAAAATCATAAAGCAATGGCACGCTGATGTCCGAGAGAGGAGGAAGCAAGAACGGCTTCTGATTCAAACTCCAAGGACTTCATTATCAACTGAATTCAGCGTTGGAATGAATAGTCCCAGATTGGCAACAAATGAGAACACACACTTACCTATCAGTGGTGAAATTTCAGAAGTACATGAAGAGGAAATCAAAGCAGAGGAAGAAGAAGGAGAAAAAGAAGAATATGAAGACGGTTCATTTAGAGGCATTTCTCGGGTTCTAACATTAGAAAGACTAGGTGGTTAA 1635 43.24 MAGGGDSSSAISLEHTPTWALAVVCFVFISMSLAIEHFIHLLTNWLKKHRRTALCEAVEKLKSELMLVGFISLLLAATQGRISKICVSTQAAEIMLPCRKQNDIQLAVVNHYEHLVISKMMGRILADDDESNSTSDSGAVASDSCSEQGKVALMTQDGIHQLHIFIFVLALMHIVYSVLTIALGRAKMRRWKAWENETQTTEYEVANDPNRFRFARQTTFGRRHMTSKSTLHLWIKCFFRQFFHSVAKVDYLTLRHGFISAHFSSSGGNSFDFQKYIQRSLDEDFKSVVGISPLMWFVVVILLLLDVYGWNVFVSLSYIPLFIVLIVGAKLEVIVERMALQIKDLNSVIIGAPLVKPSDKLFWFGYPKLVLVLLHYTLFVNAFELAFFIWATIQFGYGTCFNEQTASIIVRLVLAITVQFLCTYITLPLYALVTQMGSEFKRKAMEDQMTKIIKQWHADVRERRKQERLLIQTPRTSLSTEFSVGMNSPRLATNENTHLPISGEISEVHEEEIKAEEEEGEKEEYEDGSFRGISRVLTLERLGG 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1481175 1484724 + Conep03aG0029000.1 Cone3ag0284 433743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0284 544 Pfam Mlo family 12 488 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone3ag0284 544 Coils Coil 506 528 - -
Cone3ag0284 544 PANTHER MLO-LIKE PROTEIN 1 4 488 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0284 Cone-Chr3:1481175 Cone4ag2032 Cone-Chr4:14113354 6.87E-128 dispersed
Cone11ag1286 Cone-Chr11:9537159 Cone3ag0284 Cone-Chr3:1481175 5.80E-180 wgd
Cone18ag0292 Cone-Chr18:1425343 Cone3ag0284 Cone-Chr3:1481175 1.38E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0284 K08472 - mdm:103443847 606.29