Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0284 ATGGCCGGCGGCGGTGATTCCTCGTCTGCAATCTCGCTAGAACACACTCCCACCTGGGCACTCGCCGTCGTTTGCTTCGTCTTCATCTCCATGTCCCTTGCCATCGAGCATTTCATCCATCTTCTCACTAATTGGCTGAAGAAACATAGGAGAACTGCTCTGTGTGAGGCGGTGGAGAAGCTGAAATCAGAGTTGATGCTTGTGGGATTTATATCACTGTTATTGGCAGCAACACAAGGGCGGATATCCAAGATATGCGTATCTACACAGGCTGCTGAGATCATGCTTCCATGTCGTAAACAGAATGATATTCAACTGGCCGTTGTTAATCACTACGAGCACCTTGTTATCAGCAAGATGATGGGTCGAATATTGGCAGATGATGATGAAAGTAATAGTACGTCTGATTCTGGTGCAGTTGCTTCCGATTCTTGCAGTGAACAAGGGAAGGTTGCATTGATGACACAAGACGGAATTCATCAGCTTCACATATTCATTTTTGTGCTGGCTTTGATGCACATCGTTTACAGTGTTCTCACCATCGCATTGGGCCGGGCCAAGATGAGGCGCTGGAAAGCTTGGGAGAACGAGACTCAGACGACCGAGTATGAAGTTGCGAATGACCCGAACCGGTTCAGATTTGCAAGACAAACTACTTTCGGAAGACGCCACATGACTTCAAAATCGACTCTCCATCTCTGGATTAAATGTTTTTTCAGACAGTTCTTTCATTCAGTGGCAAAAGTTGATTATTTAACGCTCAGACACGGCTTTATCTCGGCTCACTTCTCTTCATCTGGAGGCAACAGCTTCGATTTCCAAAAATATATACAACGATCTTTAGATGAAGATTTCAAGTCTGTGGTCGGCATCAGCCCTCTAATGTGGTTTGTAGTTGTCATCCTCCTCCTTCTGGATGTGTACGGATGGAACGTATTTGTTTCGTTATCCTATATTCCTCTCTTCATTGTGCTGATTGTGGGAGCTAAGCTTGAAGTAATTGTGGAGAGAATGGCTCTTCAAATCAAAGATCTGAACAGTGTGATTATTGGAGCTCCTCTTGTTAAACCAAGTGATAAATTGTTTTGGTTTGGCTACCCTAAATTGGTCTTAGTTCTGCTGCATTATACTCTCTTCGTGAATGCATTCGAGCTGGCCTTTTTCATCTGGGCTACGATACAATTTGGTTACGGTACTTGTTTCAATGAACAAACTGCAAGCATTATAGTAAGGCTGGTCTTAGCAATTACAGTTCAATTCCTATGCACCTACATTACTCTTCCCTTATATGCTCTTGTAACACAAATGGGTTCGGAATTCAAGAGGAAGGCGATGGAAGATCAGATGACGAAAATCATAAAGCAATGGCACGCTGATGTCCGAGAGAGGAGGAAGCAAGAACGGCTTCTGATTCAAACTCCAAGGACTTCATTATCAACTGAATTCAGCGTTGGAATGAATAGTCCCAGATTGGCAACAAATGAGAACACACACTTACCTATCAGTGGTGAAATTTCAGAAGTACATGAAGAGGAAATCAAAGCAGAGGAAGAAGAAGGAGAAAAAGAAGAATATGAAGACGGTTCATTTAGAGGCATTTCTCGGGTTCTAACATTAGAAAGACTAGGTGGTTAA 1635 43.24 MAGGGDSSSAISLEHTPTWALAVVCFVFISMSLAIEHFIHLLTNWLKKHRRTALCEAVEKLKSELMLVGFISLLLAATQGRISKICVSTQAAEIMLPCRKQNDIQLAVVNHYEHLVISKMMGRILADDDESNSTSDSGAVASDSCSEQGKVALMTQDGIHQLHIFIFVLALMHIVYSVLTIALGRAKMRRWKAWENETQTTEYEVANDPNRFRFARQTTFGRRHMTSKSTLHLWIKCFFRQFFHSVAKVDYLTLRHGFISAHFSSSGGNSFDFQKYIQRSLDEDFKSVVGISPLMWFVVVILLLLDVYGWNVFVSLSYIPLFIVLIVGAKLEVIVERMALQIKDLNSVIIGAPLVKPSDKLFWFGYPKLVLVLLHYTLFVNAFELAFFIWATIQFGYGTCFNEQTASIIVRLVLAITVQFLCTYITLPLYALVTQMGSEFKRKAMEDQMTKIIKQWHADVRERRKQERLLIQTPRTSLSTEFSVGMNSPRLATNENTHLPISGEISEVHEEEIKAEEEEGEKEEYEDGSFRGISRVLTLERLGG 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1481175 1484724 + Conep03aG0029000.1 Cone3ag0284 433743

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0284 544 Pfam Mlo family 12 488 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone3ag0284 544 Coils Coil 506 528 - -
Cone3ag0284 544 PANTHER MLO-LIKE PROTEIN 1 4 488 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0284 K08472 - - mdm:103443847 606.29
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0284 Cone-Chr3:1481175 Cone4ag2032 Cone-Chr4:14113354 6.87E-128 dispersed
Cone11ag1286 Cone-Chr11:9537159 Cone3ag0284 Cone-Chr3:1481175 5.80E-180 wgd
Cone18ag0292 Cone-Chr18:1425343 Cone3ag0284 Cone-Chr3:1481175 1.38E-144 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g593 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag0284 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cone9ag0162 . 9 548 MLO family AT5G53760 70.0 8.4e-216 747.3
Cone6ag0137 . 9 551 MLO family AT5G53760 69.1 5.4e-215 744.6
Cone11ag1286 . 7 469 MLO family AT3G45290 54.3 2.8e-138 489.6
Cone3ag0284 . 12 476 MLO family AT3G45290 53.5 4.2e-134 475.7
Cone9ag0162 . 9 552 MLO family AT1G26700 70.4 6.9e-215 744.2
Cone6ag0137 . 9 552 MLO family AT1G26700 69.7 1.7e-213 739.6
Cone11ag1287 . 8 521 MLO family AT2G39200 65.1 1.6e-190 663.3
Cone18ag0292 . 8 540 MLO family AT2G39200 61.7 2.8e-187 652.5
Cone17ag1466 . 8 486 MLO family AT2G39200 52.6 5.1e-136 482.3
Cone11ag1287 . 8 411 MLO family AT1G61560 67.4 2.9e-157 552.4
Cone18ag0292 . 8 409 MLO family AT1G61560 65.9 5.6e-153 538.1
Cone17ag1466 . 9 408 MLO family AT1G61560 52.4 6.1e-115 411.8
Cone8ag0911 . 36 424 MLO family AT1G61560 50.6 9.0e-111 397.9
Cone12ag0880 . 34 422 MLO family AT1G61560 50.4 3.8e-109 392.5
Cone12ag0880 . 10 486 MLO family AT2G17430 64.9 5.6e-169 591.7
Cone8ag0911 . 13 488 MLO family AT2G17430 64.6 1.4e-167 587.0
Cone4ag2032 . 3 467 MLO family AT2G17430 57.7 6.0e-147 518.5
Cone17ag1466 . 6 451 MLO family AT2G17430 50.1 4.3e-121 432.6
Cone17ag0706 . 35 263 MLO family AT2G17430 56.0 4.1e-63 240.0
Cone17ag0705 . 1 128 MLO family AT2G17430 63.3 4.0e-42 170.2
Cone8ag0911 . 8 585 MLO family AT2G17480 60.5 2.9e-187 652.5
Cone12ag0880 . 1 577 MLO family AT2G17480 60.4 1.1e-186 650.6
Cone4ag2032 . 11 445 MLO family AT2G17480 60.4 1.8e-149 526.9
Cone17ag1466 . 9 487 MLO family AT2G17480 50.2 2.9e-126 449.9
Cone11ag1287 . 9 458 MLO family AT2G17480 50.1 1.4e-120 431.0
Cone17ag0706 . 35 263 MLO family AT2G17480 61.7 1.9e-74 277.7
Cone17ag0705 . 1 140 MLO family AT2G17480 56.2 9.8e-42 169.1
Cone4ag2032 . 1 368 MLO family AT1G42560 62.1 1.8e-129 459.9
Cone8ag0911 . 36 388 MLO family AT1G42560 57.7 3.8e-116 415.6
Cone12ag0880 . 34 386 MLO family AT1G42560 57.2 8.0e-114 407.9
Cone17ag0706 . 33 262 MLO family AT1G42560 62.0 3.2e-78 289.7
Cone15ag0319 . 5 420 MLO family AT4G24250 56.8 8.2e-125 444.5
Cone12ag0794 . 6 405 MLO family AT4G24250 56.3 1.0e-119 427.6
Cone14ag0294 . 5 408 MLO family AT4G24250 57.0 7.4e-118 421.4
Cone8ag0775 . 94 346 MLO family AT4G24250 51.8 2.1e-64 243.8
Cone19ag0701 . 1 183 MLO family AT4G24250 65.6 2.9e-61 233.4
Cone19ag0700 . 1 170 MLO family AT4G24250 59.0 1.2e-48 191.4
Cone8ag0911 . 6 388 MLO family AT5G65970 64.8 1.8e-142 503.4
Cone12ag0880 . 15 386 MLO family AT5G65970 67.2 1.8e-142 503.4
Cone4ag2032 . 2 368 MLO family AT5G65970 57.6 8.0e-119 424.9
Cone17ag1466 . 4 373 MLO family AT5G65970 51.2 2.0e-101 367.1
Cone11ag1287 . 6 376 MLO family AT5G65970 50.7 3.2e-99 359.8
Cone17ag0706 . 35 263 MLO family AT5G65970 57.0 4.9e-68 256.1
Cone4ag2032 . 1 481 MLO family AT2G33670 62.5 3.6e-170 595.5
Cone8ag0911 . 36 472 MLO family AT2G33670 63.0 5.0e-156 548.5
Cone12ag0880 . 34 470 MLO family AT2G33670 62.3 1.6e-154 543.5
Cone17ag0706 . 33 263 MLO family AT2G33670 61.5 6.7e-76 282.3
Cone17ag0705 . 1 148 MLO family AT2G33670 63.6 3.7e-50 196.8
Cone11ag1287 . 65 581 MLO family AT1G11310 57.0 5.4e-158 555.1
Cone18ag0292 . 65 516 MLO family AT1G11310 60.6 1.3e-151 533.9
Cone17ag1466 . 64 486 MLO family AT1G11310 51.1 1.4e-116 417.5
Cone3ag0284 . 66 468 MLO family AT1G11310 51.1 1.1e-110 397.9
Cone12ag0794 . 1 452 MLO family AT2G44110 66.4 1.6e-170 596.7
Cone15ag0319 . 6 467 MLO family AT2G44110 62.9 4.3e-168 588.6
Cone14ag0294 . 6 507 MLO family AT2G44110 58.3 1.9e-160 563.1
Cone8ag0775 . 97 346 MLO family AT2G44110 62.1 1.1e-86 318.2
Cone19ag0701 . 1 183 MLO family AT2G44110 55.7 6.2e-50 196.1
Cone19ag0700 . 7 170 MLO family AT2G44110 50.9 5.1e-44 176.4
Cone15ag0319 . 3 488 MLO family AT4G02600 71.0 1.3e-194 676.8
Cone14ag0294 . 3 480 MLO family AT4G02600 69.7 2.3e-188 656.0
Cone12ag0794 . 1 472 MLO family AT4G02600 66.8 5.2e-180 628.2
Cone8ag0775 . 90 346 MLO family AT4G02600 62.8 2.9e-90 330.1
Cone19ag0701 . 2 183 MLO family AT4G02600 59.9 5.4e-60 229.6
Cone3ag0923 . 2 512 MLO family AT1G11000 66.3 5.3e-194 674.9
Cone12ag0818 . 7 473 MLO family AT1G11000 53.6 5.8e-132 468.8
Cone15ag0319 . 3 488 MLO family AT4G02600 71.0 1.3e-194 676.8
Cone14ag0294 . 3 480 MLO family AT4G02600 69.7 2.3e-188 656.0
Cone12ag0794 . 1 472 MLO family AT4G02600 66.8 5.2e-180 628.2
Cone8ag0775 . 90 346 MLO family AT4G02600 62.8 2.9e-90 330.1
Cone19ag0701 . 2 183 MLO family AT4G02600 59.9 5.4e-60 229.6
Cone11ag1287 . 65 581 MLO family AT1G11310 57.0 5.4e-158 555.1
Cone18ag0292 . 65 516 MLO family AT1G11310 60.6 1.3e-151 533.9
Cone17ag1466 . 64 486 MLO family AT1G11310 51.1 1.4e-116 417.5
Cone3ag0284 . 66 468 MLO family AT1G11310 51.1 1.1e-110 397.9
Cone11ag1286 . 7 469 MLO family AT3G45290 54.3 2.8e-138 489.6
Cone3ag0284 . 12 476 MLO family AT3G45290 53.5 4.2e-134 475.7
Cone3ag0923 . 2 512 MLO family AT1G11000 66.3 5.3e-194 674.9
Cone12ag0818 . 7 473 MLO family AT1G11000 53.6 5.8e-132 468.8
Cone4ag2032 . 1 481 MLO family AT2G33670 62.5 3.6e-170 595.5
Cone8ag0911 . 36 472 MLO family AT2G33670 63.0 5.0e-156 548.5
Cone12ag0880 . 34 470 MLO family AT2G33670 62.3 1.6e-154 543.5
Cone17ag0706 . 33 263 MLO family AT2G33670 61.5 6.7e-76 282.3
Cone17ag0705 . 1 148 MLO family AT2G33670 63.6 3.7e-50 196.8
Cone11ag1287 . 8 411 MLO family AT1G61560 67.4 2.9e-157 552.4
Cone18ag0292 . 8 409 MLO family AT1G61560 65.9 5.6e-153 538.1
Cone17ag1466 . 9 408 MLO family AT1G61560 52.4 6.1e-115 411.8
Cone8ag0911 . 36 424 MLO family AT1G61560 50.6 9.0e-111 397.9
Cone12ag0880 . 34 422 MLO family AT1G61560 50.4 3.8e-109 392.5
Cone12ag0880 . 10 486 MLO family AT2G17430 64.9 5.6e-169 591.7
Cone8ag0911 . 13 488 MLO family AT2G17430 64.6 1.4e-167 587.0
Cone4ag2032 . 3 467 MLO family AT2G17430 57.7 6.0e-147 518.5
Cone17ag1466 . 6 451 MLO family AT2G17430 50.1 4.3e-121 432.6
Cone17ag0706 . 35 263 MLO family AT2G17430 56.0 4.1e-63 240.0
Cone17ag0705 . 1 128 MLO family AT2G17430 63.3 4.0e-42 170.2
Cone8ag0911 . 8 585 MLO family AT2G17480 60.5 2.9e-187 652.5
Cone12ag0880 . 1 577 MLO family AT2G17480 60.4 1.1e-186 650.6
Cone4ag2032 . 11 445 MLO family AT2G17480 60.4 1.8e-149 526.9
Cone17ag1466 . 9 487 MLO family AT2G17480 50.2 2.9e-126 449.9
Cone11ag1287 . 9 458 MLO family AT2G17480 50.1 1.4e-120 431.0
Cone17ag0706 . 35 263 MLO family AT2G17480 61.7 1.9e-74 277.7
Cone17ag0705 . 1 140 MLO family AT2G17480 56.2 9.8e-42 169.1
Cone4ag2032 . 1 368 MLO family AT1G42560 62.1 1.8e-129 459.9
Cone8ag0911 . 36 388 MLO family AT1G42560 57.7 3.8e-116 415.6
Cone12ag0880 . 34 386 MLO family AT1G42560 57.2 8.0e-114 407.9
Cone17ag0706 . 33 262 MLO family AT1G42560 62.0 3.2e-78 289.7
Cone8ag0911 . 6 388 MLO family AT5G65970 64.8 1.8e-142 503.4
Cone12ag0880 . 15 386 MLO family AT5G65970 67.2 1.8e-142 503.4
Cone4ag2032 . 2 368 MLO family AT5G65970 57.6 8.0e-119 424.9
Cone17ag1466 . 4 373 MLO family AT5G65970 51.2 2.0e-101 367.1
Cone11ag1287 . 6 376 MLO family AT5G65970 50.7 3.2e-99 359.8
Cone17ag0706 . 35 263 MLO family AT5G65970 57.0 4.9e-68 256.1
Cone9ag0162 . 9 548 MLO family AT5G53760 70.0 8.4e-216 747.3
Cone6ag0137 . 9 551 MLO family AT5G53760 69.1 5.4e-215 744.6
Cone11ag1287 . 8 521 MLO family AT2G39200 65.1 1.6e-190 663.3
Cone18ag0292 . 8 540 MLO family AT2G39200 61.7 2.8e-187 652.5
Cone17ag1466 . 8 486 MLO family AT2G39200 52.6 5.1e-136 482.3
Cone15ag0319 . 5 420 MLO family AT4G24250 56.8 8.2e-125 444.5
Cone12ag0794 . 6 405 MLO family AT4G24250 56.3 1.0e-119 427.6
Cone14ag0294 . 5 408 MLO family AT4G24250 57.0 7.4e-118 421.4
Cone8ag0775 . 94 346 MLO family AT4G24250 51.8 2.1e-64 243.8
Cone19ag0701 . 1 183 MLO family AT4G24250 65.6 2.9e-61 233.4
Cone19ag0700 . 1 170 MLO family AT4G24250 59.0 1.2e-48 191.4
Cone9ag0162 . 9 552 MLO family AT1G26700 70.4 6.9e-215 744.2
Cone6ag0137 . 9 552 MLO family AT1G26700 69.7 1.7e-213 739.6
Cone12ag0794 . 1 452 MLO family AT2G44110 66.4 1.6e-170 596.7
Cone15ag0319 . 6 467 MLO family AT2G44110 62.9 4.3e-168 588.6
Cone14ag0294 . 6 507 MLO family AT2G44110 58.3 1.9e-160 563.1
Cone8ag0775 . 97 346 MLO family AT2G44110 62.1 1.1e-86 318.2
Cone19ag0701 . 1 183 MLO family AT2G44110 55.7 6.2e-50 196.1
Cone19ag0700 . 7 170 MLO family AT2G44110 50.9 5.1e-44 176.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010176 3 1 1 1 2 0 2 1 1 1 0 0 0 1 1 1 1 2 2 0 1 1 1 1 1 1 1 1 1 2 32