Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0300 ATGGGATTAGCTTCACTCATCTACCATGGCGCTCAGGCTTCTCCCAAGTTCGATTCTCCTCCCCTTAGAGTTTCATCACCGCAACAATTTCATCCTCGAAAATGGTTTAGGGTTCAATTTGCTCGCTATCCTGATCATTTTCACTTCAACGCAGCTGTTCGTAATCGTCGTCGTGCTTCATACTCTCCAATCGCGCGCTCTAGACCGACTGAAGAGGAAAATGAATTATCCACCTCAGAAGAAAATAGGACTACCACTCCGTCATATGGTGAGGAAGGCTATGTGGAAACTTCTCAGACTCGGGAGGAACCTCAGGGACACCATAGTTATGTTTCCTCTGTTAGAACCGTTGTTTTATGTGTAAGTTCCGCTGTTGCATTTGGCATAGGCTTGGGTTTGAAAGATGGAGTTGGCAAGGCATCAGAGTTTTTCGCTGGGTACATATTGGAGCAAAGTCTATCTGTGGACAATCTGTTTGTGTTTGTTCTGATCTTTAAGTACTTCCAAGTGCCGCTTGAGTATCAGAATCGGGTACTTACGTATGGTATTGCCGGTGCAATATTCTTTCGCTTTACATTAATAGCACTGGGAACAGCTACCCTGCAGAGGTTTGAGGGAGTAAACCTACTACTGGCTGCAATTCTTCTATACTCTTCATTCAAGCTATTTACCAATGAAGAAAATGACACAGACCTTTCCGACAATTTTGTAGTGAAGACATGTCAGAGATTTATCCCTGTCACAGCTAATTATGATGGCAATCGATTTCTTACAAGTCAGGATGGTGTATGGAAAGCCACACCTTTACTTCTTACCGTAGCAGTGATCGAACTTAGTGATATCGCTTTTGCTGTCGACTCAATACCGGCGGTTTTTGGTGTAACACGGGACCCTTTCATAGTTTTCACTTCTAATCTCTTTGCCATCTTAGGTCTGAGATCGCTTTACACACTTATATCCGAGGGTTTATCCGATTTAGAATATTTACAGCCATCGATCGCTGTTGTTTTGTCATTTATCGGATTCAAGATGATCCTTGATTTCTTCGGATTCCATGTTTCAACTGAGGCTTCTCTTGGTTTTGTTGCAATAAGTCTGAGCACTGGAGTGGTACTAAGTCTGATGAAGAAATTAAGCTTGAACGTAGTCGCTCTATGCGTCCAAAGCCACCCGCCACCCGCCACTTATCAATTCATCATCACTGACGCAACCCGCAGGCCTACCATTGGGGACCTTACTAATGAAGCTGCTAGAGTGCAAGATCCATTCCTTTCCAAAAAGACTGCAAAATCAACGGCAGAGCAAGTTCAGACACTACGCTCATCAGCTGAAAAAAGAAGAAGAAAAAAGCTTCAGAAGCAATCAGAACATTCACCCATGACTACTGAGATCGGAGATGAGATTCTTCCCCCAGCGCTCGAAGCCGACGCCGAGCAGCCCCCTTTGTTCGACGGAACCACAAGGCTGTATGTTTCTTACACATGCCCCTTTGCACAGCGTGTTTGGATTACCCGAAACTATAAGGGACTACAAGAGAAGATCAAGTTAGTTGGTCTGAACCTTCAAAACAGACCTACTTGGTACAAGGAGAAAGTTTACCCACAAAACAAGGATCCAGCTAAAAGACAATATGGTGAAGAGCTACTTACATACACTGATACATTCACCAGAGAAGTATTTACTTCATTCAAAGGGGACCCAGCTAAGCAAGCTGGTGCTCAGTTTGACTACTTGGAAAATGCTCTTCACAAATTTGATGACGGGCCGTTCTTCCTTGGCCAATTCAGTTTGGTGGACATAGCCTATGTACCTTTTGTTGAAAGATTCCAAATCTTCTTAGCAGAAGTGTTTAAGTACGACATCACGGAAGGAAGGCCTAAACTTGCTGCTTGGATCGAGGAGATCAACAAGATCGATGCTTATAAGCAAACGAAAAAAACCGATCCTAAGGAGCTCGTCGAACATTACAAGAAACGGCTCTTGGCCTAG 1989 43.84 MGLASLIYHGAQASPKFDSPPLRVSSPQQFHPRKWFRVQFARYPDHFHFNAAVRNRRRASYSPIARSRPTEEENELSTSEENRTTTPSYGEEGYVETSQTREEPQGHHSYVSSVRTVVLCVSSAVAFGIGLGLKDGVGKASEFFAGYILEQSLSVDNLFVFVLIFKYFQVPLEYQNRVLTYGIAGAIFFRFTLIALGTATLQRFEGVNLLLAAILLYSSFKLFTNEENDTDLSDNFVVKTCQRFIPVTANYDGNRFLTSQDGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISEGLSDLEYLQPSIAVVLSFIGFKMILDFFGFHVSTEASLGFVAISLSTGVVLSLMKKLSLNVVALCVQSHPPPATYQFIITDATRRPTIGDLTNEAARVQDPFLSKKTAKSTAEQVQTLRSSAEKRRRKKLQKQSEHSPMTTEIGDEILPPALEADAEQPPLFDGTTRLYVSYTCPFAQRVWITRNYKGLQEKIKLVGLNLQNRPTWYKEKVYPQNKDPAKRQYGEELLTYTDTFTREVFTSFKGDPAKQAGAQFDYLENALHKFDDGPFFLGQFSLVDIAYVPFVERFQIFLAEVFKYDITEGRPKLAAWIEEINKIDAYKQTKKTDPKELVEHYKKRLLA 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1547738 1553085 - Conep03aG0030700.1 Cone3ag0300 433759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0300 662 Pfam Glutathione S-transferase, C-terminal domain 571 633 - -
Cone3ag0300 662 Pfam Integral membrane protein TerC family 144 347 IPR005496 GO:0016020(InterPro)
Cone3ag0300 662 SUPERFAMILY GST C-terminal domain-like 527 659 IPR036282 -
Cone3ag0300 662 CDD GST_C_Lambda 538 657 - -
Cone3ag0300 662 Gene3D - 536 662 - -
Cone3ag0300 662 MobiDBLite consensus disorder prediction 60 107 - -
Cone3ag0300 662 MobiDBLite consensus disorder prediction 80 95 - -
Cone3ag0300 662 SUPERFAMILY Thioredoxin-like 479 537 IPR036249 -
Cone3ag0300 662 PANTHER MEMBRANE BOUND PREDICTED REDOX MODULATOR 72 377 - -
Cone3ag0300 662 Pfam Glutathione S-transferase, N-terminal domain 489 540 IPR004045 -
Cone3ag0300 662 NCBIfam TerC/Alx family metal homeostasis membrane protein 111 377 IPR022369 GO:0016020(InterPro)
Cone3ag0300 662 FunFam Lambda class glutathione S-transferase 531 662 - -
Cone3ag0300 662 Gene3D Glutaredoxin 473 532 - -
Cone3ag0300 662 MobiDBLite consensus disorder prediction 435 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0272 Cone-Chr10:1296589 Cone3ag0300 Cone-Chr3:1547738 4.24E-120 dispersed
Cone13ag1302 Cone-Chr13:9718133 Cone3ag0300 Cone-Chr3:1547738 1.99E-94 dispersed
Cone1ag1330 Cone-Chr1:56437501 Cone3ag0300 Cone-Chr3:1547738 3.21E-76 dispersed
Cone3ag0299 Cone-Chr3:1542745 Cone3ag0300 Cone-Chr3:1547738 3.06E-99 tandem
Cone10ag0273 Cone-Chr10:1306526 Cone3ag0300 Cone-Chr3:1547738 6.26E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0300 - - - 0.0